Oreochromis niloticus (Nile tilapia): 100709216
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Entry
100709216 CDS
T06104
Symbol
usp42
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 42 isoform X1
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
onl
Oreochromis niloticus (Nile tilapia)
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
onl01002
]
100709216 (usp42)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
onl04121
]
100709216 (usp42)
Enzymes [BR:
onl01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
100709216 (usp42)
Peptidases and inhibitors [BR:
onl01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
100709216 (usp42)
Ubiquitin system [BR:
onl04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
100709216 (usp42)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
Motif
Other DBs
NCBI-GeneID:
100709216
NCBI-ProteinID:
XP_005448194
Ensembl:
ENSONIG00000019843
LinkDB
All DBs
Position
LG8:complement(20577891..20587850)
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AA seq
1226 aa
AA seq
DB search
MTIVDRSSEKSDHESAGCNRSSFTSRDVGMDGSCSSSWAVGPTVPSDSPRLKAPVGCLAP
TPGAAVYNSTPSSVDRPKEQVMCSGDGIDLPQKVLFSPDRLSLKWAQVHRIGAGLQNMGN
TCFLNSALQCLTYTPPLANYMLTREHSKTCHEPGFCMMCTMQNHVIQVFANSGNVIKPIG
VLNELKRIAKHFRYGSQEDAHEFLRYTVDAMQKSCLPGTKLDRQTQATSFIHQVFGGYLR
SRVKCLNCKAVSDTFDPFLDITLEIKTAPNVSKALEQFVKPEQLDGENAYKCTKCKKMVT
ASKRFTIHRSANVLTLSLKRFANFSGGKITKDVKYLEHLDLRPFMSQSQGEPQLYGLYAV
LVHSGFSCHAGHYFCYIKASNGQWYQMNDSSVSVSDIRTVLNQQAYVLFYIKSTDVKKSG
DYSHLNHNAGISGQSSPRPVVIPRTNTTVHHNSVGFIGPQLPPHMNKSSLHVNGNGSLRD
YPTSSKPSTSGSGVGKPNHGLASSASSSSISHSVSRPTMIPDSDKRQKLSFSIGLSKPNR
PSASSSSYCQPSSASSSSSSSSSSLSSSQSTSDVQPDVRFIPRPLNQVSGMPFSNGDHNP
VGNGASFLVPYSQESSEESDQENCGTLDNGSSSKSHPNENKDTGNVFDNSPKTTNGESGV
HHNGNGLNGQTYGVFKSSQNGHHNGHHKVNGHSGPDKVSGSNHGSLTSAAPVANGIGSDH
SQPNKDASSQASSSQSIHPAANESQDFSTPDTRAKTPSEPLPHCTESSAASAPPSATATN
APSVAAKESASALSSSGQDGNPAALPPQLGCSQSASGASAAPQKVSVSKDEAKDLPQAKC
ATTGTEGHKDTKEQYQSKPSSSGNERLSSRDRERLYSNSGRDRERHYRDRSHERESDGDR
HRYRRDYKDGHHRQYRDRFPPSGRYYREWEAERHRERTFQHPRERDRDRCSNHYHYYRYR
SREDTDHERRGYGYSHREESRGSRRWLQDSRDSWAMKDKSNGKERDYYSSKEGNFSPSTA
PETNKFKGSPPRARLSSPDKEDQNRKRTDRLSKDRDDSSEARHTKKHKKSKKKKKSKDKD
RHRESGLAVKLEISFFLNNGIGSLSSRRSSDGDSDKAAEMRKKKKKRRHRDSDAERDSPD
AARSHRNRSSEERESRKRHHSDRDLKHDNGFPPEKRRCIDYADGSGGHLLPSNHTRPANG
SSYGHLNGQPGYSQISGSGFSSDLKH
NT seq
3681 nt
NT seq
+upstream
nt +downstream
nt
atgaccatagttgacagatcttcagaaaagtctgaccacgagtcagccggatgtaaccga
tcctccttcaccagtagagacgtggggatggacggcagttgttccagcagctgggcagtg
ggccccactgtacccagtgactctccaaggctcaaggctccagtaggctgcctggccccc
actcctggagctgctgtgtacaacagtacaccctcctctgtggaccggcccaaggaacaa
gtgatgtgcagtggcgatggaattgacttgccccagaaggtgctgttctcaccagatcgg
ctcagcctaaagtgggcccaggttcaccgcattggtgcaggcctccagaacatggggaac
acctgcttcctcaactcagccctgcagtgtctcacctacacccctcctttagcaaactac
atgctgacgcgggagcactccaaaacatgtcatgagccagggttctgtatgatgtgcacc
atgcaaaaccacgtcattcaggtttttgccaactctgggaatgtcattaagcccattggt
gtactcaatgagcttaagaggattgcaaagcacttccgctatggaagccaggaagatgct
catgaattcctgcggtacacagtggatgctatgcaaaagtcctgcttgcctggaaccaaa
ttggacaggcaaacgcaggcaacctctttcatccatcaagtgtttggcgggtacctaaga
tccagagttaaatgtttaaactgcaaagctgtctcggatacatttgacccttttctggat
atcactctggaaattaagactgctccaaatgtctccaaagctctggagcagtttgtcaaa
ccagaacagctggatggcgaaaatgcttacaaatgcaccaagtgcaaaaaaatggtaacg
gcctcaaaacgattcacaatccatcgcagcgccaatgtgctcaccctctcactcaaacgc
tttgcaaacttcagtggagggaaaatcacaaaggatgtgaagtatttagagcatctggat
ctgcggcccttcatgtctcagtcccaaggggagccccagctctatgggctgtatgctgtg
ctggttcactctggattcagttgtcatgctggacactacttctgctatattaaggccagc
aatgggcagtggtatcagatgaatgactcgtctgtgtcagtcagtgacattaggaccgtc
ctcaaccagcaggcctatgtcctcttctacatcaagtccacagatgtgaaaaaaagtggg
gactacagtcacttgaaccataacgctggcatatctggtcagtcatctccccggccggtg
gtgatcccacgcaccaacaccaccgtccatcacaacagtgttggcttcataggtccccag
ctgccaccacacatgaacaagagttctcttcatgttaatgggaatggatctctgagggac
tatcccacaagctccaagcccagcaccagcggcagtggggtggggaaaccaaaccatgga
ctagcttcttctgcgtcctcttcttccatctcccactcagtcagccggcccacaatgatt
ccagacagcgacaaacgacagaagctttcattttcaattgggctaagcaaaccgaaccgc
ccatctgcttcttcctcctcttactgccagccatcctccgccagcagctcctcctcctcc
tcctccagctctttgtcctcctcacagtctacctcagacgtccaaccagacgttcgtttt
attccgcgtccactaaaccaagtcagcggcatgcctttcagtaatggggatcacaaccct
gtaggaaacggggcgtccttcctggtgccgtacagccaagagtcttcagaggaatcagac
caagagaactgtggcactctggataacggcagttcatccaagtctcatcctaatgaaaat
aaagacacaggaaatgtctttgacaattctcccaaaaccaccaatggggagtcaggagtg
caccataacggcaatggattaaatggacaaacttatggagtcttcaaatccagtcaaaat
ggacaccacaatggtcatcacaaagtgaatggacacagcggccctgacaaggtctctggc
agtaatcatggcagtttgacgtctgcggctcctgttgctaatggaataggcagtgaccat
agccaaccaaacaaagatgcctcatcccaggccagttcttctcagagcattcatcctgct
gctaatgaaagccaggatttctccactcctgatacaagggctaaaactccatctgaaccc
ctgcctcactgtacagaatcctccgccgctagtgctccaccctcagctactgctacaaat
gccccttctgttgcagctaaagaatctgcttccgctctttcttcttctgggcaagatggc
aaccctgcagccttaccccctcagctgggctgctctcaaagcgccagtggggcttctgca
gctccacagaaagttagcgtaagcaaggatgaagccaaggatctaccacaagctaaatgt
gcaacaacagggactgaaggacataaggatactaaggagcagtatcagtccaagcctagt
tctagtggcaatgaaagactatcttcccgagacagggaaagactgtattctaactctggc
agagatagagaaagacactacagggataggagtcacgaacgagaaagcgacggcgatcgt
caccggtacagacgggactacaaagacggtcaccaccgccagtacagggatcgtttcccc
ccttctggacgttactacagggaatgggaggccgagcgtcaccgggagcgaaccttccag
caccctcgggagcgtgatcgtgacaggtgctctaaccattaccactactatcgctaccgg
tcgagagaggacactgaccatgagcgaaggggatatggttactcccaccgagaggagtct
cgtggcagtcggaggtggctgcaggatagtagagactcctgggcaatgaaggataagagt
aatggcaaagagagggactattactcctcaaaggaaggaaatttctcaccttctacagca
ccagaaacaaacaagttcaagggctccccgccacgggctcggctttcctctccagacaaa
gaggatcaaaatcgcaagaggactgatcgtctcagcaaagacagggatgacagctctgag
gcccgccacactaaaaaacacaaaaagagtaagaaaaagaagaaatcaaaggataaagac
agacaccgtgagagtgggctggccgtaaagcttgagatctcgttttttttaaacaatggc
attggttctctatcatcccgtagaagttctgatggagattcagacaaagctgcggaaatg
aggaagaaaaagaaaaagaggagacatcgggacagcgatgctgaacgggacagcccagac
gcagctcggagccacagaaacagaagcagtgaggaaagggagagccgcaagcgacaccac
tctgacagagacttgaaacatgacaatggctttccaccggaaaaacgtcgctgcatagac
tacgctgacggcagcggtggccatctactcccttccaatcacaccagaccggcaaacggt
tcaagttacggccatctcaatggacaaccaggttacagccaaatcagcggcagtggattt
tccagtgacctgaaacactga
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integrated database retrieval system
