Oreochromis niloticus (Nile tilapia): 100709229
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Entry
100709229 CDS
T06104
Symbol
ddb2
Name
(RefSeq) DNA damage-binding protein 2 isoform X1
KO
K10140
DNA damage-binding protein 2
Organism
onl
Oreochromis niloticus (Nile tilapia)
Pathway
onl03420
Nucleotide excision repair
onl04115
p53 signaling pathway
onl04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
100709229 (ddb2)
09124 Replication and repair
03420 Nucleotide excision repair
100709229 (ddb2)
09140 Cellular Processes
09143 Cell growth and death
04115 p53 signaling pathway
100709229 (ddb2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
onl04121
]
100709229 (ddb2)
03400 DNA repair and recombination proteins [BR:
onl03400
]
100709229 (ddb2)
Ubiquitin system [BR:
onl04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
100709229 (ddb2)
DNA repair and recombination proteins [BR:
onl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
100709229 (ddb2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40_CDC20-Fz
WD40
WD40_WDHD1_1st
Beta-prop_RIG_2nd
WDR55
Beta-prop_EML_2
Beta-prop_EML
Beta-prop_TEP1_C
EIF3I
Beta-prop_EIPR1
Beta-prop_IFT140_1st
WD40_RFWD3
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_Vps41
Motif
Other DBs
NCBI-GeneID:
100709229
NCBI-ProteinID:
XP_013124184
LinkDB
All DBs
Position
LG7:complement(51229808..51234807)
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AA seq
543 aa
AA seq
DB search
MVDLQCHPPFTSFNRHKLQNRHFSAHSHVYCRVMQTETFLLLNCSVKALNIAEMKSKPTK
SAAAGSKNKVKKTPEGVSSPTLSRKLRDKKNGETSKSGTALKSAGVQKRGWDGSILHYIY
KSTLGQSLHSQMRQCLQEPFVRSLSSYHFHGGSSPFDRRITCLEWHPTHPTTLAVGSKGG
DIYLWDFEAPAKKTFIQGNGAGDFIGGMKFCPTDLSRVYVASGEGTLTAQSFEGRAPTVL
SRTQDCGHDHHNVCFWYCCVDVSVSRQMLVTGDNAGQLLLLGLDGQKIFSDKLHKAKVTH
AEFNSRCDWLLVTASVDHTVKLWDLRNIKDKKSFLYEMPHEKAVNSAYFNPLDCSKLLTT
DQHDEIRVYSSSDWSKPQHIIQHPHRQFQHLTPIKATWHPMYDLIVAGRYPDDRFCAGDL
RTIDIFDSNTAELVCQLYDPTASGIKSINKFNPMGDAIGSGMGITVLVWDRNESLMGDHH
VQQEGPSTSVLRGQRRSQPRSSGNWRGPAVDAKLKKKLASLEETETKTKKGCTKQKQTQM
RKK
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atggtggatctacagtgccacccaccgttcaccagctttaacagacacaagttacaaaac
agacatttttcagcacatagtcacgtgtactgtcgtgttatgcaaacagagacgttcttg
ctgttaaactgcagcgttaaagcactgaacatcgcagaaatgaaaagcaagcccacgaag
tcagccgcagctggatcaaagaataaagtgaagaaaacacctgagggggtctccagtcca
actctctccagaaaactacgagacaaaaaaaatggcgaaacgtcaaaatcagggactgct
ctcaagtctgcaggagttcagaagagaggttgggacggaagcatactgcactatatctac
aaaagcactctgggccagagtttgcactcacagatgagacagtgtctccaggaacctttc
gttcgctctctgtcatcctatcatttccacggtggcagcagccccttcgaccgcaggatc
acctgtcttgagtggcatccgacacatcctactactctggctgtggggtccaagggtgga
gacatttatctgtgggactttgaggcgcctgccaagaagacctttattcaagggaacgga
gcaggagactttatcggagggatgaagttttgccccacggacctttctagagtctatgtg
gcctctggcgagggcacactgaccgcacagagttttgagggccgcgcacccaccgttttg
tccagaactcaagactgcggccacgatcaccacaatgtttgtttttggtactgctgcgtt
gacgtgtctgtaagccggcagatgctcgtgacaggagacaatgcggggcagcttttactt
ctgggtttggatggccaaaagattttcagtgacaaattgcacaaagccaaagtgacccac
gcagagttcaactcccgatgcgactggttgctggtgacggcctcagttgaccacacagta
aagctctgggacttgaggaacatcaaggacaagaaaagcttcctctacgaaatgcctcac
gagaaagccgtcaactcagcctatttcaaccctttggactgctccaagctgctcaccaca
gatcagcacgacgagatccgcgtctactcatcttctgattggtcgaagcctcagcacatc
atccagcacccgcacaggcagtttcagcacctcacacccatcaaggccacatggcaccct
atgtatgatctaattgtggccggccgttaccccgacgatcgcttctgcgctggcgacctg
aggaccattgacatctttgactccaacacagcagagctcgtgtgtcagctgtacgatccc
actgcttcagggatcaaatctatcaacaaattcaacccaatgggcgacgcaattggatct
ggcatgggtataactgtgctggtctgggaccggaacgagtcactgatgggcgatcaccac
gttcagcaggaaggaccatcgacctcagttttaagagggcagcggaggagtcagccacgc
tccagcgggaactggaggggtcctgctgtggatgcaaagcttaagaaaaagctagcttca
ctggaagaaactgagactaaaaccaagaagggctgcactaaacaaaaacaaacacagatg
agaaagaagtga
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