Oreochromis niloticus (Nile tilapia): 100709276
Help
Entry
100709276 CDS
T06104
Symbol
nhlrc1
Name
(RefSeq) E3 ubiquitin-protein ligase NHLRC1
KO
K10602
E3 ubiquitin-protein ligase NHLRC1 [EC:
2.3.2.27
]
Organism
onl
Oreochromis niloticus (Nile tilapia)
Pathway
onl04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
100709276 (nhlrc1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
onl04121
]
100709276 (nhlrc1)
Enzymes [BR:
onl01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
100709276 (nhlrc1)
Ubiquitin system [BR:
onl04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
100709276 (nhlrc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NHL
zf-RING_5
zf-RING_UBOX
zf-RING_2
zf-C3HC4_4
zf-C3HC4_3
zf-C3HC4
DUF6383
zf-C3HC4_2
DUF7497
zf-RING_4
Motif
Other DBs
NCBI-GeneID:
100709276
NCBI-ProteinID:
XP_005472482
Ensembl:
ENSONIG00000020611
UniProt:
I3KXS0
LinkDB
All DBs
Position
LG11:complement(18790766..18793039)
Genome browser
AA seq
412 aa
AA seq
DB search
MAKSLQHRGCLSPEGIIREIQINLLECKVCFETFSSQQRERRPQNLSCGHVLCLECITAL
SHPLLRKLECPFCRQLCSVDSTSHCQVLSDLKDLLLSQSPSPSAPSCRAKAGFIFPTALT
CTTLLLRTAFGGWGTLINPTGIAVLGSSGTIVVVHDGEKRVVVFNLQGKKLHSFGQKGAA
SGEICYPVDVAVTPAGHVVVTDAGDKAVKVFTSRGNHVLTIKDSFQMPWGVDTDSCGHIL
VSDVEAGTLSKVRVDYSNGVILEHQTTISDLQCPKAVAYCCVNGNTAVTEHLTDVTNPTE
RHQHRRIRVFTKEFHLLYQTDTFSLTLQSTVRLSFSGVAFDRDGDLIVIDSDQGMIWSLG
KLQSGPVLTPLVGDHLVRPVGLALLNNLLITLDSGDHTVKIYSPKSDAGPVT
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atggccaagagtctccaacatcgtggctgcctcagtccagaggggataatcagagagatt
cagatcaacctactggagtgcaaagtctgcttcgagacgtttagctctcagcaaagggag
cgcagaccacagaacctttcctgtggccatgtactctgtctggaatgcatcacagctttg
tcccaccctctcctgaggaagctggagtgccctttctgtcgacagttatgcagtgttgac
agcacctcccactgccaggttcttagtgacctaaaggatcttctgttgtctcaaagtccc
tcaccgtctgctccttcgtgtagagcaaaagctggttttatctttcccacagctctgacg
tgcacaactcttctcctgcgtactgcatttggtgggtgggggactcttatcaacccaact
ggaatagctgttttggggtcctcaggaacaatagttgtggtccatgatggagagaagaga
gtggtagtgttcaatctacagggaaagaagctgcacagctttgggcaaaaaggagcagcc
agtggggagatctgttacccagtggacgtggcagtgaccccagctggtcatgtggttgtg
actgatgcgggtgataaagctgtaaaagtgttcacgtccagggggaatcacgtgttgaca
atcaaagattccttccagatgccctggggcgtggacactgacagctgtggacacatcctg
gtctctgatgttgaggccggcaccctctccaaggtgagggtggactatagtaatggcgtc
attctagagcatcaaacaaccatttcagaccttcagtgccctaaagcggtggcctactgt
tgcgtgaatgggaacactgcagtgacggagcatctaactgatgtcaccaatccaacggag
agacaccaacacagaaggatcagggtgtttacaaaagagttccacctcctttaccagaca
gacactttcagcctgaccctgcagtccacagtgaggctcagcttctcaggtgtggcgttc
gacagagatggagatttaattgtgattgactcagaccaggggatgatttggagcttaggg
aagctccagagtggcccagtccttactcctcttgtgggagaccatcttgttcgccccgtt
ggattagcgctactgaacaaccttctcatcacactggacagtggcgaccatacagtgaag
atttattctcccaaatctgatgctggacctgtgacatag
DBGET
integrated database retrieval system
