Oreochromis niloticus (Nile tilapia): 100709382
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Entry
100709382 CDS
T06104
Symbol
polr2b
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB2
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
onl
Oreochromis niloticus (Nile tilapia)
Pathway
onl03020
RNA polymerase
onl03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
100709382 (polr2b)
09124 Replication and repair
03420 Nucleotide excision repair
100709382 (polr2b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
onl03021
]
100709382 (polr2b)
03400 DNA repair and recombination proteins [BR:
onl03400
]
100709382 (polr2b)
Enzymes [BR:
onl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
100709382 (polr2b)
Transcription machinery [BR:
onl03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
100709382 (polr2b)
DNA repair and recombination proteins [BR:
onl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
100709382 (polr2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
DUF5817
Motif
Other DBs
NCBI-GeneID:
100709382
NCBI-ProteinID:
XP_003458708
Ensembl:
ENSONIG00000000070
UniProt:
I3ITZ5
LinkDB
All DBs
Position
LG2:complement(36369107..36399757)
Genome browser
AA seq
1174 aa
AA seq
DB search
MYDQDEDNQYDEDDDEITPDLWQEACWIVISSYFDEKGLVRQQLDSFDEFIQMSVQRIVE
DAPPIDLQAEAQHTSGEVEEPPRYLLKFEQIYLSKPTHWERDGAPSPMMPNEARLRNLTY
SAPLYVDITKTIIKEGEDQLQTQHQKTFIGKIPIMLRSTYCLLSGLTDRDLCELNECPLD
PGGYFIINGSEKVLIAQEKMATNTVYVFAKKDSKYAYTAECRSCLENSSRPTSTIWVSMM
ARGGQGVKKSAIGQRIVSTLPYIRQEVPIIIVFRALGFVSDRDILEHIIYDFDDPEMMEM
VKPSLDEAFVIQEQNVALNFIGSRGAKPGVTKERRIKYAKEVLQKEMLPHVGVSDFCETK
KAYFLGYMVHRLLLAALGRRELDDRDHYGNKRLDLAGPLLAFLFRGMFKNLLKEIRIYAQ
KFIDRGKDFNLELAIKTRIISDGLKYSLATGNWGDVKKAHQARAGVSQVLNRLTFASTLS
HLRRVNSPIGRDGKLAKPRQLHNTLWGMVCPAETPEGHAVGLVKNLALMAYISVGSQPSP
ILEFLEEWSMENLEEISPAAIADATKIFVNGCWVGIHKDPEQLMNTLRKLRRQMDIIVSE
VSMIRDIREREIRIYTDAGRICRPLLIVEKQKLLLKRRHIDQLKEREYNNYSWQDLVASG
VVEYIDTLEEETVMLAMTPDDLQEKGVAYCSTYTHCEIHPSMILGVCASIIPFPDHNQSP
RNTYQSAMGKQAMGVYITNFHVRMDTLAHVLYYPQKPLVTTRSMEYLRFRELPAGINSIV
AIASYTGYNQEDSVIMNRSAVDRGFFRSVFYRSYKEQESKKGFDQEEIFEKPTRETCQGM
RHAIYDKLDDDGLIAPGVRVSGEDVIIGKTVTLPENDDELDSTNRRYTKRDCSTFLRTSE
TGIVDQVMVTLNQEGYKFCKIRVRSVRIPQIGDKFASRHGQKGTCGIQYRQEDMPFTCEG
ITPDIIINPHAIPSRMTVGHLIECLQGKVSANKGEIGDATPFNDAVNVQKVSNLLSEYGY
HLRGNEVLYNGFTGRKLTSQIFIGPTYYQRLKHMVDDKIHSRARGPVQILNRQPMEGRSR
DGGLRFGEMERDCQIAHGAAQFLRERLFEASDPYQVHVCNLCGLMAIANTRTHTYECRGC
RNKTQISLVRMPYACKLLFQELMSMSIAPRMMTS
NT seq
3525 nt
NT seq
+upstream
nt +downstream
nt
atgtatgaccaggatgaagataatcagtatgatgaagatgatgatgagatcactcctgac
ctgtggcaggaagcgtgctggatcgtcatcagctcttattttgacgagaaagggctggtg
cggcagcaactagattccttcgatgagttcattcagatgtctgttcagaggatcgtggag
gacgctccgcccatcgacctgcaggctgaagctcagcacacctcaggggaggtggaggag
ccgcctcggtacctcctgaagtttgagcagatctacctgtctaagcccacccactgggag
agagatggagcaccatctcccatgatgcccaacgaggcgcggctgaggaacctgacgtac
tctgcgccactgtatgtggacatcacaaagacaatcatcaaggagggtgaggatcagttg
cagacgcagcaccagaagaccttcattgggaaaattcccatcatgcttcgctccacgtac
tgcctgctaagtggcctgactgaccgagacctgtgcgagctcaacgagtgcccattggac
cccggaggttacttcatcatcaatgggtcagaaaaggtgctgatcgctcaggaaaagatg
gccaccaacacggtgtacgtgtttgccaagaaggactcgaagtacgcgtacactgcagag
tgccgatcctgcctggagaattcatcccgcccaaccagcacaatctgggtcagcatgatg
gctcgaggagggcagggagtgaagaagagcgccataggtcagaggatcgtctccacgctt
ccctacatccgacaggaagttcccatcatcatcgtgttccgggcactgggcttcgtatcg
gacagagacatcctggaacatatcatttatgactttgatgaccctgagatgatggagatg
gtgaagccctctctggacgaagcttttgtgatccaggagcagaacgtggcgttgaacttc
attggctcacgaggcgcaaaacccggtgtgacgaaggagcgacggataaaatacgcaaag
gaagtcctacaaaaggagatgctgccacatgtcggcgtaagcgacttctgcgagaccaag
aaggcctacttcttagggtacatggtgcacaggttgctgctcgccgctctcggcaggcgg
gaactggatgacagagatcactatggcaacaagaggctggacctcgccgggccattactg
gccttcctgttccgaggcatgtttaaaaacctgctgaaggaaatcagaatctatgctcag
aagttcatcgaccgcgggaaggatttcaacctagagctcgccattaagacgcgtatcatc
tctgacgggctcaagtactctcttgccacaggtaactggggcgacgtgaagaaggctcac
caggcccgagccggcgtgtcacaggtgttgaaccgtctcaccttcgcatccacactgtct
cacctgcgccgggtcaactctcctattggtcgagatggaaagctggcgaaacctcgacag
ctgcacaacacgctgtgggggatggtgtgtccggctgagacgcccgagggtcacgctgtg
gggctggtgaagaacttggccctgatggcctacatctctgtgggctcgcagccatcgccc
atcctggagtttctggaggagtggagcatggagaacctggaggagatctcacctgcggcc
attgcagatgccactaaaatctttgtgaatggctgctgggtgggaatccacaaagatcca
gaacagctgatgaatacgctgaggaaactccgcagacagatggacatcatcgtctctgag
gtgtcgatgatcagagacattagagagcgtgagatcagaatttacacggacgctggacga
atctgccgaccgctgctgatcgttgagaaacagaaactgctgctgaagagacgccacatc
gaccagctgaaggagcgcgagtacaacaactacagctggcaggacttagtggccagcggt
gtggtggagtacatagacaccctagaagaggagaccgtcatgctcgctatgactccagat
gacctccaggagaaaggcgtggcctattgttccacctacacccactgtgagatccatcca
tctatgatccttggagtgtgtgcgtccatcatcccgttccccgatcacaaccagtctccc
aggaacacgtatcagtccgccatggggaagcaggccatgggtgtttacatcaccaacttc
cacgttcgaatggacacgctcgctcacgtgctgtactaccctcagaaaccactcgtcacc
actcgctccatggagtacctgcgcttcagggagctccccgcaggtatcaactcgatcgtg
gcgatcgcctcatacaccggctacaaccaggaagactctgtgatcatgaacaggtcagcc
gtggatcgaggattcttcaggtctgtgttctatcggtcatacaaagagcaggagtctaag
aaaggctttgatcaggaggagatctttgagaagccgacgcgtgaaacctgtcaagggatg
cgacatgccatctatgacaagctggatgacgatggactcatcgcacctggcgtccgtgtt
tctggcgaggacgtgatcattgggaagacggtgacactgccagagaatgacgacgagctg
gatagcacgaaccgccgctacacgaagagagactgcagcacgtttctgaggaccagtgag
acgggcatcgtggaccaagttatggtgaccctgaatcaggagggctacaagttctgcaaa
atcagggtacgctctgtccgaattcctcagatcggcgacaaattcgccagccgacacgga
cagaagggaacctgtgggatccagtacagacaggaggatatgccattcacctgtgagggg
atcactcctgacatcatcatcaaccctcacgccattccgtccagaatgacagtcggccat
ttgattgagtgtctgcaggggaaggtgtctgccaacaaaggtgagatcggtgacgccacg
ccatttaacgatgccgtcaacgtgcagaaggtgtcaaacttgctgtctgaatatggatac
catctcagaggaaatgaggttctgtataacggcttcactgggaggaagctgacgtctcag
atctttatcggcccgacatattaccagcgcctgaagcacatggtggacgataagatccac
tcgagagcccgcggcccggtccagatcctcaaccgacaacccatggaggggcgctcacgt
gatggtggtttgcggtttggcgagatggagcgtgactgtcagattgctcacggagcagct
cagttcctgagggagcgtctgttcgaggcgtctgatccctaccaggtgcacgtttgtaac
ctgtgcggactgatggccattgccaacacgcggacacacacgtacgaatgtcgtggttgc
cgcaacaaaacccagatctctctggtgcggatgccgtacgcctgtaagcttctgttccag
gagttgatgtcaatgagcattgctcctcgtatgatgacatcataa
DBGET
integrated database retrieval system
