Oreochromis niloticus (Nile tilapia): 100709526
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Entry
100709526 CDS
T06104
Name
(RefSeq) LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal hydrolase 36
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
onl
Oreochromis niloticus (Nile tilapia)
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
onl01002
]
100709526
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
onl04121
]
100709526
Enzymes [BR:
onl01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
100709526
Peptidases and inhibitors [BR:
onl01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
100709526
Ubiquitin system [BR:
onl04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
100709526
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
Motif
Other DBs
NCBI-GeneID:
100709526
NCBI-ProteinID:
XP_003450127
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All DBs
Position
LG4:21186230..21203264
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AA seq
1148 aa
AA seq
DB search
MPIVDKLKEALKPGRKDTGDEGDLNKLLASSAKKVLLQKIEFEPATKGFSYQLDSLKNKY
VILNPRTEGATAQKAAEPAQIKRQVLENVVGSQSDGIPAPQKMLFPGNKITLKWERVYRV
GAGLHNLGNTCFLNSTVQCLTYTPPLANYLLSKEHSRVCHQSGFCMICVMQNHIIQAFAN
TGNAIKPVSFIRDLKKIARHFRFGSQEDAHEFLRYTIDAMQKACLNGYPKLDRQTQATTL
VHQIFGGYLRSRVKCSICKSVSDTYDPYLDIAVEIRQAANIVRALELFVKPDVLSGENAY
MCAKCKKKVPATKRFTVHRTSNVLTLSLKRFANFSGGKITKDVGYPEFLNIRPYMSQSSG
DPVMYGLYAVLVHSGYSCHAGHYYCYVKASNGQWYQMNDSMVHSSNIKVVLNQQAYVLFY
LRIPETKKNADGQTTKQGMLHSGKNTAPSEQIKRSNLNGPLSSPQVKKKLEPAQLRKIQS
MDGGLGLPISRNGVSTQPQPRLSNWASSSNGPPKLPGGPAVIEEPFKKVKKPSPQSQLPS
RSSTPTPSNNGVSRTEGDKKQGGEGRGMAASTSFKSLSDSSSADTTESKDSVGPKSAPVG
ETPSTPRKGSSSLASPARSVERSQSTEEQKTAKIKPPALGNITSEATSTMSPPPAKKLAL
SAKKARSRSPSSIDVLPRLPSSDPMHQNQLNSLTLASPTPTHRADPFHSFKVQSSPLAHS
TGSFKLQSPQKQSLFSTLQKPSVSLPPKTNGLHCPGPKSPKSSNKLNSVVQEPDLDDPPA
QNVKHKKKKKRRHSEVESVPEPVTSPAPQTRCTAAESDGEKRCKRKKKKRKRLDEDGEKA
KERACVSSHLDTSNQEDDWCQGGMWSLTPQSSAEESKKKPQLSATTPSQCESNQKEQETD
SVLKKKKKKKKKENVGQSGDALQDTTSARSTTESSSSEMKPTGSRNDTGDLLKVKKKLKK
KKRLKEEMRQWEESKHCPDAETDASEPPHKKKTMEKDRINKESTATVVVWDSQVKDGYKR
SVAPAADGSTSDGSTRAAPVAWDGKKMSSVVEELLRNASDKAYGANVLSWDGEVSAVSRD
AIEDARDARCDTVIDEWDEDFDRGKVKKVKQYKREKWRGASSMFQKIQDRRNKWSVTPGG
KRVFGVRR
NT seq
3447 nt
NT seq
+upstream
nt +downstream
nt
atgccgatagtggataaactcaaggaggctttaaaacctggccgaaaggacacaggcgat
gagggtgacctcaacaagctattggcctcttctgccaagaaggtccttttgcagaaaata
gagtttgagcctgccaccaaggggttctcctatcagcttgacagcctaaagaacaagtat
gtgatcctcaatcctaggactgagggtgccacagcgcagaaagccgcagagcctgctcaa
attaagaggcaagtcttagagaatgtggtcgggagccagagtgatgggatccctgcaccg
cagaagatgctctttccagggaacaagatcacccttaagtgggagcgtgtatacagggtg
ggagccggcctccacaaccttggaaacacctgcttcctcaattccacagtgcagtgtctc
acctacacgccgccacttgccaactacttactctcaaaggagcacagccgtgtctgtcac
cagtcaggcttctgtatgatctgtgtaatgcagaaccatatcatccaagccttcgccaac
acaggcaacgccattaagcccgtctccttcatcagagacctaaaaaaaattgcaagacat
tttcgctttggtagtcaagaggacgcccatgaatttttgcggtacaccatcgatgccatg
cagaaagcctgtctcaatggctatccgaagcttgacaggcagacccaggccacgacactg
gttcaccagatctttggaggttacctcaggtcaagagtaaaatgctctatttgtaaaagc
gtctcagatacgtacgatccttacctggatatcgccgttgagattcggcaagcagcaaac
atagtgcgagccttggaactgtttgttaaaccagatgttttaagtggagagaatgcctac
atgtgtgccaagtgcaaaaagaaagtgccggccaccaagcgcttcacagtgcatcgaaca
tccaatgtactcaccctttcactgaagaggtttgcaaacttcagcggtggaaaaataaca
aaggatgttggttacccagaatttctaaacatccgcccttacatgtctcagagctcaggc
gatcctgtcatgtacggcctctatgctgttctggtgcattcaggctacagttgtcatgct
ggacactactactgctatgtgaaggcaagcaatggacaatggtaccaaatgaatgattca
atggtgcactcaagtaacatcaaagtggtcttgaaccagcaggcttatgtgctgttctac
ttgaggatacctgaaaccaagaaaaatgcagatgggcagaccaccaagcaggggatgttg
cattccgggaaaaatacggcaccgtcggaacagataaagaggtccaacttgaacgggcct
ctctcttccccacaggtgaaaaagaaacttgagccagcccagctgcgcaagatccagtcg
atggacggtggtttgggtttgcccatttccaggaacggtgtgagcactcagccacagccc
agactgtccaactgggcatcctcctccaacggtccgccaaagctgccgggtggacccgca
gttatagaggaacctttcaagaaggtgaagaagccctctccgcagagccagctgccatcc
cgcagcagcactccgaccccttccaacaacggggtcagcaggacggagggagataaaaaa
caaggtggagaaggcagaggcatggcagcgtctacctcatttaagtctttgtctgactcc
tcctctgctgacaccactgagtcaaaggactccgttggtcccaaaagtgcaccagtagga
gagactccctccactcctcggaaaggctccagcagcctggcgtctccagcaaggagcgtg
gagcgctctcagagcacagaggagcagaagacggcaaaaattaaacccccggctctcggc
aacatcacatctgaagccaccagcaccatgtcacctccacctgccaagaagcttgccctg
tcggccaagaaggctcgcagccggagtccgagcagcattgatgttctgccccgtttgccg
tccagtgaccccatgcatcaaaatcaacttaactccctcacccttgcctcacccactccc
actcacagagctgatccattccattcatttaaagtccaatcatcacctttagcccattca
actggatccttcaaactgcagagtcctcagaaacagtcccttttctccacactgcaaaag
ccaagcgtgagccttcctcctaaaacaaacggtcttcactgtccaggcccaaagagtccc
aagtcttccaacaagctcaactcggtggttcaagaaccagaccttgacgaccctcccgct
caaaatgtcaaacacaaaaagaagaagaagcggcggcattctgaggtagagagcgtccca
gagccagtcacatccccagctccacagacacggtgcaccgcggcagagtccgatggcgag
aagaggtgcaagaggaaaaagaagaagcgaaagcggctggacgaagacggagagaaagcg
aaggagcgggcgtgtgtctcgtctcatttggacacatcaaaccaggaggacgactggtgt
cagggtggcatgtggagcctgacccctcagtccagtgcagaagagtctaagaaaaagcct
cagttatccgctacaactccatcgcagtgtgagtcaaaccagaaagagcaggaaacggat
tctgtgttgaagaagaagaaaaagaagaaaaagaaagagaatgtgggtcagtcaggagac
gctctgcaggatacaacgtctgcacgctctacaacagaaagcagcagttctgagatgaag
cccacagggagtcggaacgatacaggagatttgttaaaggtaaaaaagaaattaaaaaag
aagaagaggctaaaagaagagatgcgacagtgggaggagagcaagcattgtcctgatgct
gagactgacgcatcggagcccccgcacaaaaagaaaacgatggagaaggacagaataaac
aaagaaagcacagccacagtggtagtgtgggacagccaagtgaaggacggctacaagcgc
agcgtggcaccagcggctgatggaagtacatcagatggctcgacccgcgctgcacccgta
gcttgggatggaaaaaagatgagtagtgtggtagaagagctgctcaggaacgcttcggat
aaagcctacggagccaatgtcctcagttgggatggtgaggtctctgctgtcagcagagat
gccattgaagatgcccgcgatgccaggtgtgatactgtgatcgacgagtgggatgaagac
ttcgacaggggaaaggtgaagaaagtaaagcagtataaaagagagaagtggagaggggcc
agcagcatgttccagaagatccaggacaggcggaacaagtggtctgtaacacccggaggg
aagagagtttttggagtccgacgctga
DBGET
integrated database retrieval system
