KEGG   Oreochromis niloticus (Nile tilapia): 100709555
Entry
100709555         CDS       T06104                                 
Symbol
sem1
Name
(RefSeq) 26S proteasome complex subunit SEM1
  KO
K10881  26 proteasome complex subunit DSS1
Organism
onl  Oreochromis niloticus (Nile tilapia)
Pathway
onl03050  Proteasome
onl03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:onl00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03050 Proteasome
    100709555 (sem1)
  09124 Replication and repair
   03440 Homologous recombination
    100709555 (sem1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:onl03019]
    100709555 (sem1)
   04131 Membrane trafficking [BR:onl04131]
    100709555 (sem1)
   03051 Proteasome [BR:onl03051]
    100709555 (sem1)
   03400 DNA repair and recombination proteins [BR:onl03400]
    100709555 (sem1)
Messenger RNA biogenesis [BR:onl03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX-2 complex
     100709555 (sem1)
Membrane trafficking [BR:onl04131]
 Exocytosis
  Tethering complex
   Exocyst complex assembly proteins
    100709555 (sem1)
Proteasome [BR:onl03051]
 Eukaryotic proteasome
  Regulatory particles
   PA700 (19S proteasome)
    non-ATPase subunits
     100709555 (sem1)
DNA repair and recombination proteins [BR:onl03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    Other HR factors
     100709555 (sem1)
SSDB
Motif
Pfam: DSS1_SEM1
Other DBs
NCBI-GeneID: 100709555
NCBI-ProteinID: XP_003457293
LinkDB
Position
LG22:complement(24663697..24666704)
AA seq 70 aa
MSDKKQTVDLGLLEEDDEFEEFPAEDWTGLDEDEDAHVWEDNWDDDNVEDDFSNQLRAEL
EKHGYKMETS
NT seq 213 nt   +upstreamnt  +downstreamnt
atgtcagacaagaagcagaccgtagatctgggcttgctggaggaagatgatgagtttgaa
gaattcccagctgaggactggacagggctggatgaagacgaagacgctcatgtttgggaa
gataactgggacgatgacaacgtagaagatgatttctcaaatcagctgagagcggagctt
gaaaaacatggttacaagatggagacatcatag

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