Oreochromis niloticus (Nile tilapia): 100709561
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Entry
100709561 CDS
T06104
Symbol
rpp40
Name
(RefSeq) ribonuclease P protein subunit p40 isoform X1
KO
K14530
ribonucleases P/MRP protein subunit RPP40 [EC:
3.1.26.5
]
Organism
onl
Oreochromis niloticus (Nile tilapia)
Pathway
onl03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
100709561 (rpp40)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
onl03009
]
100709561 (rpp40)
03016 Transfer RNA biogenesis [BR:
onl03016
]
100709561 (rpp40)
03029 Mitochondrial biogenesis [BR:
onl03029
]
100709561 (rpp40)
Enzymes [BR:
onl01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.5 ribonuclease P
100709561 (rpp40)
Ribosome biogenesis [BR:
onl03009
]
Eukaryotic type
Pre-60S particles
RNases
RNase MRP
100709561 (rpp40)
Transfer RNA biogenesis [BR:
onl03016
]
Eukaryotic type
5'processing factors
Ribonucrease P
100709561 (rpp40)
Mitochondrial biogenesis [BR:
onl03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
RNase MRP
100709561 (rpp40)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ribonuc_P_40
Motif
Other DBs
NCBI-GeneID:
100709561
NCBI-ProteinID:
XP_003458162
Ensembl:
ENSONIG00000014016
LinkDB
All DBs
Position
LG18:complement(34656585..34667977)
Genome browser
AA seq
350 aa
AA seq
DB search
MTSSELDRTPRTLLVSESSSFLDPKNRISAQVQQLHFNHQVSVLLPECSSAPSHLDSVLN
NFSSFYLIKKLPVYELLDRHFLETAVYHGAVFGLSYRTRIDEDNCVALMPNGHLTLSLDK
DSFEILGFEGKPSRFKHRTATRFVVSVDLTDSSMAPGRRSYLRLLTSLKSRLQLQTDFLL
SHHPGGGASIQPLLSRCDWSQHRPEVNCRVLTNLPCPAPLSCDPHSFLEWLGAVDAGISC
ENSSSSFLSSFVCPEPNTMHRHALSVSVSGLLLPHDIHRLLQELRRYVEQPRLASWVSMT
VRGFADSPVSCSNHEHGFLRGGENFYTLMMFHDHTYQLHLAMGAHDVCPP
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atgacgtcctcggagctggaccggactccgcggactctgttggtgtcggagagctccagc
ttcttggacccgaagaaccggatcagcgcgcaggtgcagcagttgcacttcaaccaccag
gtgtctgtgctgcttcctgagtgtagctccgccccctctcacctggactctgtgttgaac
aacttcagcagcttctacctgatcaagaagctgccggtgtatgagctgctggaccgacac
ttcctggagacggccgtgtaccacggtgcagtgttcggtctgtcctacaggactcgcatc
gatgaagataactgcgtcgcactgatgccaaacggtcacctgaccctctctctggataaa
gactcgtttgagattttgggcttcgaagggaaaccgtccagattcaagcacagaactgcc
accagattcgtggtatctgtggatctgactgacagcagcatggctcctggtaggcggagc
tacctgaggctcctcacaagtcttaagtcccgccttcagctgcagaccgacttcctgtta
tcacatcatccagggggcggggcctctattcagcctctcctgtctcgatgtgattggtcg
cagcacagacctgaggtcaactgccgtgttttgaccaacctgccctgccctgcacccctg
tcatgtgaccctcacagcttcctggagtggctaggagccgttgacgctggcatcagctgc
gagaactcgtccagcagcttcctgtcgtcgtttgtctgtcccgaaccgaacacgatgcat
cgccacgctctgagcgtgtccgtgagcggcctgctactgccacacgacatccaccgtctg
ctgcaggagctcaggcgttacgtggagcagcctcggctggcgtcctgggtctccatgacg
gttcgcgggtttgctgacagtccggtatcctgcagcaaccacgagcacggtttcctgagg
ggcggagagaacttctacacgctgatgatgttccacgaccacacctaccagctccacctt
gccatgggagcgcatgatgtctgcccgccctga
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