Oreochromis niloticus (Nile tilapia): 100709977
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Entry
100709977 CDS
T06104
Symbol
smarcal1
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1
KO
K14440
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1 [EC:5.6.2.-]
Organism
onl
Oreochromis niloticus (Nile tilapia)
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
onl03036
]
100709977 (smarcal1)
Chromosome and associated proteins [BR:
onl03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
100709977 (smarcal1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HARP
SNF2-rel_dom
Helicase_C
ResIII
ERCC3_RAD25_C
DUF7480
Flavi_DEAD
Motif
Other DBs
NCBI-GeneID:
100709977
NCBI-ProteinID:
XP_005453099
Ensembl:
ENSONIG00000009036
UniProt:
I3JR70
LinkDB
All DBs
Position
LG16:14221394..14231883
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AA seq
900 aa
AA seq
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MSNQLTADQQRMIEENRRKALERRAQRLGQANSTNVKPSVDSKSTSVQTQLPKQSPDPVA
SVQHRETSVSGPKCFPPPLKREPQSQSQQQLPGTSSHFNQSTVCNSASSNQTQVTNSIPS
KSQHLRSSILSPEGSVPVGPVQGKHQLSSSSSGGAVGSFYKQPSKPAQSQVAQLSSNPTS
TNVVPAKKPSISVRGRCVPHTEDRFRVEVSYHAGLIAVFKSIPSKNYDPATKMWNFSLED
YRQLMEEAAAIPSVSLRPLEGMEAVDVAEATSRARDGAALAALLKLCNGWQKPGATLQGQ
CILVSQTKFEVDIGYHVDVIAAFKQMPTKSYDMKTRKWNFSLEDYKRLMDLLSGIAAVEV
EPLPRAIIQAFSARFDGTEARILNVPEADLSSIDPSLTRSLMPFQREGVNFAVSKQGRLL
LADDMGLGKTIQAICIAAYYRKEWPLLVVTPSSVRFTWAEAFRRWLPSLTPDSINVVVKA
KDSLRSGLINIISYDLLSRMDKQQPGNPFNVLIMDESHFLKNMKTARCKAALPLLKVAKR
VILLSGTPAMSRPAELYTQILAVRPTLFPRFHEFGIRYCDARQMTWGWDYTGSSNLGELK
LLLEECLMLRRLKSEVLSQLPAKQRKVVTVTIDGINTRTKAALSAAAKQLAKGHRNKMEE
KEALLVFYNHTAEAKLQAIMEYITDMLECGREKFLVFAHHKLVLDHITTELEKKNVDFIR
IDGSTPSAERQQLCERFQYSAKTCVAVLSITAANMGLTLHSADLVIFAELFWNPGVLIQA
EDRVHRIGQTSSVNIHYLVAKGTADDHLWPMIQEKMNVLEQVGLSESNFSETAENTSFHS
KDPTQRSIMEMFQRSFSEDDDMDEAILLEAANDWEDTPPESTSAQHRGTSTDKQWSYKDR
NT seq
2703 nt
NT seq
+upstream
nt +downstream
nt
atgtctaatcagctgactgcagatcaacagcgaatgattgaggagaacaggcggaaggct
ttagaaagacgagcccaaagacttggacaggctaacagcaccaatgttaagccctcagta
gactccaaaagtacttcagtgcaaacacagctccccaaacagagtccggatcctgttgcc
tcagttcagcacagagaaacctcagtttcgggaccaaaatgcttcccccctcccttaaaa
agggaaccacagagccaaagtcagcagcagctgcctggcactagcagccacttcaaccaa
agcactgtgtgtaattctgcatcttcaaaccagacacaagttaccaactcaattccttcg
aaaagtcaacatttgaggagctccatcttgtctcctgaaggaagcgtccccgtggggcca
gttcagggcaaacatcaactctcatccagcagctccggaggtgcagttggctcattttac
aagcagcccagtaaacctgctcagagtcaagtggcacagctttcctctaaccccacctct
acaaatgtcgtacctgcaaaaaagccttccatctctgtaaggggaagatgtgtacctcac
acagaagaccgtttcagggtagaagtgagctaccatgcagggcttattgctgttttcaag
tccatcccctcaaaaaactatgatcctgccaccaagatgtggaactttagtctggaggac
taccgacagctaatggaggaagcagctgccattccctcagtgtctttgagaccgttggag
ggaatggaagcggtggacgtggcggaggccaccagccgagctcgtgacggcgcggccctg
gcagcgctgctcaagttatgtaatggctggcagaagcccggagccactttgcagggccag
tgcattctcgtgtcccagacaaagtttgaggtggacattggctaccatgttgatgtcatt
gcagcgttcaagcaaatgccaacaaagagctacgacatgaaaacaagaaagtggaatttt
tcactcgaggactacaagagactcatggatctcctcagtgggatagcagcagtggaggtg
gagcctcttcccagggcaataatccaggctttctctgccaggtttgatgggactgaagcc
aggattttaaacgtccctgaggcagacctctctagcatcgacccctctctcacccgaagc
ctcatgcccttccagagggagggagtcaactttgcagtgtctaaacagggccgcctcctc
ctggctgatgacatgggcctgggaaagaccattcaggccatctgtatagcagcttattac
agaaaggagtggcctttgttggtggtgactccgtcctctgtacgattcacctgggctgag
gccttcagacgctggcttccctccttgactcctgacagcatcaacgtagtggtgaaggcc
aaagacagtctgcggtctggtttgatcaacatcatcagctatgacctgctgagcaggatg
gacaagcagcagccaggaaatcccttcaatgttctcatcatggatgagtctcactttctg
aaaaacatgaagactgctcgttgtaaagcagcattgcctctgctgaaggtagcgaagcga
gtgatcctcctgtcggggacccccgccatgtccagaccggctgagctgtacactcagatt
ttggccgtcagaccgacactctttccacgcttccatgagtttgggatccgctattgtgat
gccagacagatgacttggggctgggactacacgggctcttccaatcttggagagctgaag
ctgttgttggaagagtgtctgatgctgcgccgtctcaagtctgaggtcctttcccagctt
cctgctaagcagcgcaaggtggtcacggtgaccatcgatggaatcaacacccgcacgaaa
gcagctctgtcagctgcagccaagcagttggccaaaggacatcgcaataaaatggaagag
aaggaagccctcctcgtcttttataaccacacagccgaagccaagctacaagccattatg
gagtacatcacagacatgctggagtgtgggagggagaagtttctcgtgtttgcccatcat
aaattagtcctggatcatatcacaaccgagctggagaaaaaaaatgtcgattttatccgt
attgatgggagcactccgtcagcggagcgacagcagctgtgcgaaaggtttcagtactca
gccaagacctgtgtggcggtactgtccatcactgcagctaatatgggcctaaccctgcac
tctgcagacctggtgatcttcgctgagcttttctggaaccccggggttctcattcaggca
gaggatagagttcatcgtattggacaaaccagcagtgtgaacattcactacctggttgcc
aagggaactgctgatgatcacctatggcccatgatccaggaaaaaatgaatgtcctggag
caagtgggtctttccgagtcaaacttctcggaaactgcagaaaacaccagcttccactca
aaggatcctacccagaggagcatcatggagatgttccagagatctttctctgaggatgac
gacatggatgaggccatcttattggaggctgcaaatgactgggaggacactccgcccgaa
tccacgtctgcgcagcaccgcggcaccagtacggacaagcagtggagctacaaagaccga
tga
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