Oreochromis niloticus (Nile tilapia): 100710153
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Entry
100710153 CDS
T06104
Symbol
vcam1
Name
(RefSeq) vascular cell adhesion protein 1
KO
K06527
vascular cell adhesion molecule 1
Organism
onl
Oreochromis niloticus (Nile tilapia)
Pathway
onl04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
100710153 (vcam1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
onl04515
]
100710153 (vcam1)
04090 CD molecules [BR:
onl04090
]
100710153 (vcam1)
04091 Lectins [BR:
onl04091
]
100710153 (vcam1)
Cell adhesion molecules [BR:
onl04515
]
Immunoglobulin superfamily
VCAM
100710153 (vcam1)
CD molecules [BR:
onl04090
]
Proteins
100710153 (vcam1)
Lectins [BR:
onl04091
]
I-type lectins (Siglecs)
100710153 (vcam1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
Ig_2
I-set
ig
C2-set_2
V-set
C1-set
Ig_C17orf99
ICAM1_3_5_D2
ICAM_N
REJ
Motif
Other DBs
NCBI-GeneID:
100710153
NCBI-ProteinID:
XP_005475713
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Position
LG17:24097369..24110758
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AA seq
816 aa
AA seq
DB search
MDLLCVRRLFVQLISAVLLMSSKHILALRVDITPETALFGLGERQQLVCLFQGCTTMPSV
SWSFLGDRPLSGSISTNQTCSVLTFEPVKMEHDGRIQCAVSCNGNETKGSRKVQVYSFPS
DPVITGQDNVKLGVNSTLTCKAFNIYPDEEVNITWHSGNAILQTTVEDTESGAVQSVYSF
TAENMDQGRNITCRVTLKLKDLPDDKRTRESTVPINVLYAPVVKTLESKEVMASSPLTLT
CLAEGNPEPTITWSFRTADGRTLQRGQGSQLNFTAVELSEAGRYECDARNTEGTNSSTVD
ITVHSPPTNTSLSVIPGEEVVEGQQVTFVCSSEGAPLPRLVLSRNGRELQSVDRASTMIF
DLPYALLEHSDVYQCVASNLYGSQQASSSITVRAHPLQVEASPQVSAARGSALSLSCKAS
GCLHTPILLTWSRKDQTILQTTWPQDGLSVLHLQDLDLQDRGEYSCQAQCETVSRSRNIQ
VHVYSFPIEPVLENPGPVLLGEEAVFRCDVINVFWVNQLRIQWLLGNKMVAEKSFSFSSF
LQNVSFSLHHRVDEDHQVLTCSADLLQEGGELWKSKRNSIHLQVHYPPRNTSLSIRPGEE
LVEGRHVTFSCHSDGAPAPALVLSRNGMELRRIKPATSSPLTFTFSPILLEHSDLYRCEA
SNKYGSEVASHSITVKAPPRNTTVHILPSTVVQEGQNVTVCCQTISFPPSAVILKKMTNG
TELYSTNGTFLLVNLTAKDSGLYQVNVTNDLGYQVKIFSISVRERSTKLPPSFSVIIIPA
VCIATVLAASALFLDYVRRSRKKGFYQLPQSAPPSA
NT seq
2451 nt
NT seq
+upstream
nt +downstream
nt
atggatcttctgtgtgtccgcaggctctttgttcagctcatctcagctgtgctcctgatg
tcatcgaagcacattttggctctgcgggtggacataactcctgaaacagctctgttcggt
ctgggtgagcgtcagcagctggtctgcttgtttcagggctgtaccacaatgccaagtgtg
tcctggtcctttctgggggaccggcctctgagcgggtccatcagcaccaaccaaacttgt
tctgtgttgacctttgagcctgtaaagatggagcatgatggaaggatacagtgtgcagtc
agctgcaatggaaacgagacaaaagggagccgcaaggtgcaggtttactccttcccatcg
gaccctgtcatcacaggccaggacaatgtcaaactgggggtaaattccactctgacctgc
aaggcatttaacatatatcctgatgaggaggtgaacatcacttggcacagtgggaacgct
atcctgcagaccacagtggaagataccgaatccggggcagtacagtctgtctacagcttc
acagctgaaaacatggatcagggaaggaatatcacctgtagggtcacactgaagctgaag
gacctgccagatgacaagaggaccagagaaagcacagtgccaataaatgtcttatatgct
cctgttgtgaagacgttggagtctaaggaagtgatggccagctctccgctcactctcacc
tgtttggcagagggaaatcctgagccgaccatcacctggagtttcaggacagcagatggc
cgaactctgcaacgcggtcaaggcagtcagctcaacttcacagcagtggaactgtctgag
gctggtcggtacgagtgtgatgcgcgaaacacggaaggaacaaacagtagcaccgtggac
atcacggttcacagtccacccactaacacctccctctctgtaattccgggtgaggaggtg
gtggagggtcagcaggtgacttttgtctgtagctcagagggtgctccgctccccagactg
gtgctgagcaggaatgggagagaacttcaaagcgttgacagagcttccacaatgatcttc
gacctgccttacgccctgctcgaacactccgatgtctaccagtgtgttgcctctaatctg
tacggatcccagcaggcctccagctccatcactgtcagagctcaccctctacaggtcgag
gcgagtcctcaggtctctgcagcgagaggttcagctctgagtctgagctgcaaagcctct
ggctgtctgcacacccccatcctcctcacctggtcgaggaaagaccagactatcctccag
acaacctggccgcaggacggactctctgtgctccatctgcaggacctggatctccaggat
cggggtgaatatagctgccaggctcagtgcgagaccgtcagcaggagcagaaacattcaa
gtccatgtctattcgtttccaattgaacccgtactggagaatcctggccctgtcctgctg
ggtgaagaagcagtcttccgctgtgatgtcattaatgtcttctgggttaaccagctgagg
attcagtggcttttgggaaacaaaatggtggcggaaaagtcgttcagtttctccagtttt
ttacagaacgtctcttttagtcttcatcaccgggttgacgaggatcatcaggtgctgacc
tgcagcgcagacctactgcaagaaggcggagaattgtggaagtccaagaggaacagcatc
catctgcaggtccactatcctccgaggaatacatcactgtcaattaggccaggcgaggag
ctggtggagggtcgtcacgtgacctttagctgtcactcagatggagctccggccccagca
ctggtgctgagcagaaatgggatggagcttcgaagaatcaaaccagccacctcatcacca
ctgaccttcaccttctcccccatcctgctggaacactctgacctttaccggtgtgaagca
tccaacaagtatggatctgaagtggcttctcactccatcactgtcaaagctcccccgagg
aacaccacagtccacatcctgccgtcaacagtggtccaggaggggcaaaatgtcactgtc
tgctgccaaaccatcagtttcccaccgtcagctgtgattcttaagaaaatgaccaatggc
accgagctatattctaccaatggaactttcctactggtcaatctcacagccaaagactct
gggttataccaggtcaacgtgaccaatgaccttgggtaccaagtcaaaatcttcagcatc
agtgtcagagagagaagtaccaagcttccacccagtttcagcgtcatcatcatcccagcc
gtctgcatcgccactgtgctagcagcttctgctctgttcctcgactacgtgaggagatcc
aggaagaaaggcttttatcaactaccccagtctgctccaccttcagcctga
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