Oreochromis niloticus (Nile tilapia): 100710230
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Entry
100710230 CDS
T06104
Name
(RefSeq) transcription intermediary factor 1-alpha isoform X9
KO
K08881
tripartite motif-containing protein 24 [EC:
2.3.2.27
]
Organism
onl
Oreochromis niloticus (Nile tilapia)
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
onl01001
]
100710230
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
onl04121
]
100710230
Enzymes [BR:
onl01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
100710230
Protein kinases [BR:
onl01001
]
Serine/threonine kinases: Other
TIF1 family [OT]
100710230
Ubiquitin system [BR:
onl04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
100710230
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-B_box
ANCHR-like_BBOX
Bromodomain
PHD
zf-RING_UBOX
zf-RING_5
PML_CC
zf-C3HC4
Motif
Other DBs
NCBI-GeneID:
100710230
NCBI-ProteinID:
XP_005451104
Ensembl:
ENSONIG00000008845
UniProt:
I3JQH7
LinkDB
All DBs
Position
LG7:46189673..46204167
Genome browser
AA seq
976 aa
AA seq
DB search
MDAMEKLESGHTAVLSGENEAESTREERSGALDQHDLDTCPVCHLSFHSKEPKLLPCLHT
FCERCLPLPSRNLDVTEPSVSQSDNGATKPLNVIRCPVCRQECMAADVLDNMFVKESFEA
PSSTVERAVQLCMTCDDNTEAAGFCVECVEYLCTTCVEAHQRVKFTKDHMIRQKSEVSQD
VCVVSNQRPMFCHIHKQEPLKLFCETCDLLTCRDCQLTKHKDHSYQFLEDAYKNHKEHME
RMTHQLQEKKKLIEEVSDSINSGLLLVEQNHTSVRDEIKKSVSNLILEINKKGKILLDQL
EAVTKDHESLLRKQQKDIGYLSQHLDHVIDFIKWATAKNGGTALLYCKRLILFQIENLLQ
AKCSASFVPQSTIRFQCRASYWASNVDLGTLMVESVPGHQLGGFHHEHTHSGQSSSGSPH
SFALGAPHSTLAQLQMQVDKLNPQAHWQPQPPPPPCTWYQSIQLQQTVPGPLQRGSPSHS
LPPQPDHRFTRPLPNHVSSTRSILSPGFSPQYQQRRTGSGSTYQTKPIDGFFSTPFYAQI
TPPPLSGSVSLPHSQQRTEPTYMNRGNDSAGPVYTVKPNYPQGAETSLSSRNAPGHHTPV
SQKKTSSVFWKAPEIHQASGAVGSAAKKRQRSSPRPIIIIKDEPDDESSYVHPKQRASLP
DSTDDQPQINSQGEDVQTCVHSTDDKPCCPSHSPSEPLGQSKTRPPNHVSSVGEQQQVEQ
NKVQLEDSNETSCAVCQTTGELLCCQKCHKAFHLTCHVPALLRSPSREWFCTFCCDLLLP
EMEYVCKPEAKTIKKEMDFEGAFSPVDKQKCERLLLYLFCSELNSVFHKSASLSVHADNS
LTIKGPVSFSTVKNRLEAEQSMCYQSPAEFVLDIRLIFGNCVACSECRSNTELAVTCRRF
KELFEDYLKLIYPDQTFPEIKPEMIQTASPECQDSQLKSLDNIVPLAKRQRTFSDSQDAP
SYLSGEEGIGLKLQFS
NT seq
2931 nt
NT seq
+upstream
nt +downstream
nt
atggatgcgatggaaaaactggagtcgggacatactgctgtcctgtcaggcgagaacgaa
gcagagagcacgcgagaggagcggtccggtgcactcgaccaacatgacctggacacgtgc
cccgtttgtcatctaagcttccacagcaaggagcccaaacttctgccgtgcctgcacact
ttctgcgagaggtgcttgcctttaccctcgaggaatctggacgtgacggaaccgtccgtc
tcccagagcgacaacggcgcgaccaaaccactaaacgtgatccgctgtccggtgtgcagg
caggaatgtatggcggcagatgtgttggataatatgttcgtgaaggagtcattcgaggct
cccagcagcacagtggagagagcagtccagctctgtatgacctgcgatgacaacaccgaa
gctgctgggttttgtgttgagtgtgtggagtacttgtgtactacctgtgtggaggcccac
caaagagtcaaattcaccaaagaccatatgatcagacagaagtcggaagtatcacaagac
gtttgtgttgtgtcgaatcagaggccgatgttctgtcatatccacaaacaagagccactg
aaactcttttgtgagacatgtgacctgcttacctgtcgggactgccaactcaccaagcat
aaagaccacagttatcagttccttgaagatgcttataaaaaccacaaagagcacatggag
cgtatgactcatcagctacaggagaaaaagaaactgatagaagaggtatcagactccata
aatagtggacttcttctggtggaacagaaccatacttctgttcgtgatgaaataaagaaa
tctgtcagcaatttaatcctcgagataaacaaaaagggcaaaattctacttgatcaactt
gaggctgttacaaaagatcatgagagtctcttgcgtaaacaacagaaagacattggctat
ctgtcccaacacctggatcatgtcatcgacttcatcaaatgggccacagccaaaaatggg
ggcacagccctattgtactgtaaacgtttgattctgtttcagatcgaaaacctccttcag
gcaaaatgcagtgcttcattcgtaccgcagagcaccatacgcttccagtgccgagcctct
tactgggcctcaaatgttgatttgggcactttaatggtggagagtgtaccaggccaccag
ctgggtggttttcatcatgagcacacccacagtgggcagagttcctcaggctcaccccac
agctttgccctgggagctccccatagcactctggctcagctccagatgcaggtggacaag
ctaaacccccaagctcactggcagccccaaccacctcctccaccctgcacatggtaccaa
agcatccaactacagcaaacagtaccggggcccctacagagaggctctccctcccacagt
ttgcctcctcaaccagaccacaggtttacgaggcctctgcccaaccatgttagctcaact
aggagcatactgagccctggattttctccccagtatcagcagagaaggacaggaagtggc
tccacctaccaaaccaagcctattgatggatttttctctacacccttctatgcacaaata
actccgccacccctcagtggtagtgtcagtttacctcattcacaacagaggactgagccc
acatacatgaacaggggaaatgattcagcaggtccagtttatacagtgaaaccaaactat
cctcagggagcagaaacttccttgtcaagcagaaacgcaccaggacatcacactccagta
tcccagaaaaaaacaagcagcgttttttggaaagccccagaaatacaccaggctagtgga
gcagtgggatctgctgcaaagaagagacaacgatcatctccaaggcctataattatcatc
aaagatgaaccagatgatgaaagtagttatgtacatcccaaacaaagagccagcctcccc
gacagcacagatgaccaaccccaaataaattcccaaggtgaagatgtccaaacttgtgtt
catagcacagacgacaaaccctgttgcccctcacactctccaagtgagccactgggccag
agtaagactagacctccaaatcatgtcagttcagtgggagaacagcagcaggtagagcaa
aataaagtccaactggaagactctaatgagacctcgtgcgctgtgtgtcagactacagga
gagctgttgtgctgccaaaaatgtcataaagcttttcatcttacgtgccatgttccagct
ctcctcagatctccaagcagggaatggttttgcactttctgttgtgacctgttattgcct
gagatggagtatgtctgcaaacctgaagccaaaacaataaagaaggagatggattttgaa
ggagcattttcccctgtggacaaacaaaagtgtgagaggctgttgctgtacttgttttgc
agtgagctcaactcagtctttcacaagtctgcatctctctcggtacatgctgataacagt
ctgactataaagggaccagtgagtttttccacagtgaaaaaccgtctagaggctgagcag
agtatgtgctatcaaagccccgcagagtttgtattagacatcaggctcatctttggaaac
tgtgtagcctgcagtgagtgccggagtaacactgaacttgccgtgacatgtaggagattt
aaagaactctttgaagattatctgaagctcatctaccctgatcagacctttccagaaatc
aaaccagagatgattcagactgcttcacccgagtgtcaagattctcaactcaaatctctt
gacaatatagtcccacttgcaaaacgccaacgcacattttcagattcccaggatgcacca
agctatctcagtggagaagagggtattggattaaagctccaattttcctaa
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