Oreochromis niloticus (Nile tilapia): 100710311
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Entry
100710311 CDS
T06104
Symbol
sort1
Name
(RefSeq) sortilin
KO
K12388
sortilin
Organism
onl
Oreochromis niloticus (Nile tilapia)
Pathway
onl04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
100710311 (sort1)
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Gene cluster
GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
BNR_6
Motif
Other DBs
NCBI-GeneID:
100710311
NCBI-ProteinID:
XP_003444972
Ensembl:
ENSONIG00000002515
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Position
LG20:complement(21209436..21226027)
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AA seq
823 aa
AA seq
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MGLLLRGILLLSACTLTAGVDFQLGSKPFGQSGFVRRSNTEGKAAKIVKRSLPAWLAPSP
NHKIKRRSTEEDDSCKALQGYATKLDANTHDFEFHDLSGSVSLAWVGDGTGVILALTTFQ
VPFFMVKLGQSKLYRSEDYGKSFQDVTVLINNTFIRSEFGIAISPSNSGKVILTAEVSGD
LKTRIFVSEDFGKTFTDRNLPFNPLTQITYNPENSSVLVVLSNDYELWLSEDFGVNWKNI
HRMVCLVKWGRKNTIYFTASLNGSCIDRGMLELRRTTNYGKTIKTVASKIYSFGLGGRFL
FASVMTGKGTLRTIHVSVDQGDSWNIAQLPPVGHEQFYSILAANDEMVFMHVDEPGDTGF
GTIYVSDDRGTVYSKSLERHLYTTTGGDTDFTNVTSLRGVFITSVLAEDNSVQSVVSFDQ
GGEWVPLQKPANSKCDATAKDPDKCSLHIHAAYSTSQKLSIPMLPLTEPNAVGLIIAHGS
VGDAISVMRPDVYVSDDGGYTWIKALDGPHHYAILDSGGLLVAVEQSMTNPVNKIKFSTD
EGQCWNEYNFTKDPIFFTGLASEPGARSMNVSIWGYRDSYLSQYWTSFTIDFKELITRTC
EDSDYVQWLAHSDDISDPDDGCLLGYKEKFLRLRKDSVCWNGRDYEVSTEPTPCSCTLDD
FMCDFGYYRKENSSECVEQPDLTDKVLEFCLQGKEEQLQTSGYRKIPGDKCEGGEVRFRQ
EIDLSKRCVSDLVGPELLVDNKASKSVPVVITVVIVLILSIAAGVVFVKKYVCGGRFLVH
RYSVLQQHVEANAADGIDEPLETNHTQNGKIEFHDDSDEDLLE
NT seq
2472 nt
NT seq
+upstream
nt +downstream
nt
atgggactattgctccgcggcatcctgctgttatcggcttgcactttgacagcaggtgta
gattttcagctgggctccaagcccttcgggcagtcgggttttgtgaggcgttcaaacact
gaagggaaagctgcgaaaatcgtaaagaggtctctgcccgcatggctggctccatcacca
aaccacaagataaaaagaaggagcaccgaagaggacgactcgtgtaaagctcttcaagga
tatgccaccaagttggacgccaacacccacgattttgaattccatgacctgagtggctcg
gtgtcgctggcttgggttggagatggcacaggggttattctggccttgacaacgtttcag
gtccctttcttcatggtaaaacttggacagtcgaaactctatcgaagcgaggactacggc
aagtcatttcaggatgtaaccgtcctcatcaacaacaccttcatcagatcagagttcggc
attgcaatcagccccagtaactcaggcaaagtgattctgacagctgaagtgtctggagac
ctcaagacccgcatttttgtctctgaggactttggaaagaccttcaccgaccggaacttg
ccttttaaccccttgacgcagatcacgtacaaccctgagaattccagtgtgctggttgtc
ctcagcaacgactatgagctgtggctgtctgaagactttggcgtgaattggaaaaacatt
cacagaatggtgtgtctggtaaaatggggaagaaaaaatacaatctactttacagccagc
ctcaacggctcctgtattgatcgaggaatgctggaactgaggaggacgaccaactacggc
aaaaccatcaagactgttgccagtaagatctactcttttggcctcggcggacgcttcctc
tttgcatctgtaatgacgggaaagggcaccctgcggacaatccacgtatcagtggatcag
ggtgatagttggaacattgcccagctgcctcctgttggtcatgagcagttctactctatc
ctggcagcgaacgatgaaatggtcttcatgcatgttgacgagccaggagatactggattt
ggtacaatctatgtgtcagacgaccgaggtactgtgtattccaagtcactggagcgccac
ctttacaccactacggggggagatacggacttcactaatgttacttctctacgaggggtt
ttcatcaccagtgtcctggctgaagataactctgtgcagtctgtggtgtcctttgaccag
ggaggggagtgggtacccctccagaaacctgccaacagcaagtgtgatgctacagccaag
gacccagacaagtgcagtcttcacatccatgctgcctacagtacttctcagaagctcagc
atccccatgctccctctgactgaaccaaatgctgtgggtctcatcatagctcacggaagt
gttggtgatgccatctcagtgatgagaccagatgtgtatgtgtctgatgatggtggctat
acctggataaaggctcttgatggaccccatcactatgctattctggactcaggaggtctg
ctggtggccgtggagcagagcatgacaaaccctgtcaacaagattaaattttctactgat
gaaggacagtgctggaatgagtacaacttcaccaaagatcccatcttctttactggactt
gcatcagagccaggagcacgttctatgaatgttagtatctggggctacagagactcttac
ctcagccagtattggacctcgtttaccattgacttcaaagaactaattactagaacatgt
gaagacagtgactatgtgcagtggttggcccactctgatgatatcagtgatcccgatgat
ggttgcttgctgggctacaaagagaagttcttacgtctaaggaaagactcggtttgctgg
aacgggcgcgattacgaagtcagcaccgagccaaccccgtgttcatgcaccctggatgac
ttcatgtgtgactttgggtactaccgtaaagagaacagctcggagtgtgtggagcagccg
gacctgacagacaaagtgttggagttctgtctgcagggcaaagaggaacaattgcagact
agtggctacaggaaaatccctggggataaatgtgaaggaggagaggtgcgtttccgtcaa
gagatcgacctcagcaagaggtgtgtgagtgacctagtcggcccggaacttctggtggac
aataaggcctccaagtctgtgcctgttgtgataacagtcgtcatagtcctgattctgagt
attgcagcaggagtagtctttgtcaagaaatatgtctgcggtggcaggttcttggttcac
aggtactctgtgctacagcagcatgttgaggccaatgctgctgatgggatagacgaaccg
ctggagaccaaccacactcaaaatggcaaaatagagtttcatgatgactcagatgaggat
ctgcttgaatag
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