Oreochromis niloticus (Nile tilapia): 100710336
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Entry
100710336 CDS
T06104
Symbol
atg4c
Name
(RefSeq) cysteine protease ATG4C
KO
K08342
cysteine protease ATG4 [EC:3.4.22.-]
Organism
onl
Oreochromis niloticus (Nile tilapia)
Pathway
onl04136
Autophagy - other
onl04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
100710336 (atg4c)
04136 Autophagy - other
100710336 (atg4c)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
onl01002
]
100710336 (atg4c)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
onl04131
]
100710336 (atg4c)
03029 Mitochondrial biogenesis [BR:
onl03029
]
100710336 (atg4c)
Peptidases and inhibitors [BR:
onl01002
]
Cysteine peptidases
Family C54: Aut2 peptidase family
100710336 (atg4c)
Membrane trafficking [BR:
onl04131
]
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
100710336 (atg4c)
Mitochondrial biogenesis [BR:
onl03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
100710336 (atg4c)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C54
CD1107-like
Motif
Other DBs
NCBI-GeneID:
100710336
NCBI-ProteinID:
XP_005457147
Ensembl:
ENSONIG00000008825
UniProt:
I3JQF5
LinkDB
All DBs
Position
LG17:33482637..33493756
Genome browser
AA seq
480 aa
AA seq
DB search
MENKGSDEVEKLKTKFLSVWHNVKYSWALKPKTSFSRNSPVLLLGKCYHFKAEATDEESP
TEASVEDLVMGDVDAFRRDFASRVWLTYREEFSPLPGSTLTSDCGWGCMLRAGQMMLAQG
LMLHFLGRDWTWSEALTLQPLDTETWTTTAAKRLVASLEASLQGVPGPSVRSSSPQAQAL
SLGSAEEADAHLKEMYHRTLVSWFGDSPSTPLGLHRLVRLGLTMGKQAGDWYGPAVVAHI
LKKAVEEAMDPGLACITAYVSQDCTVYSADVVDCHRAPRAERTSDETPDAPTLPQNDQPA
HASTLPESRAVIILVPVRLGGEKTNPEYFDFAKSILSLEYCIGIIGGKPKQACYFVGFQD
DSLIYMDPHYCQSFVDVSTSDFPLQSYHCPSPKKMPFSKMDPSCTVGFYSRSVQDYERIS
QELSKLLQPSAKEKYPAFTFVQGHGRDYDLSAGLTPEKREWPFIRDPRRTVTTVGDFVLL
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atggagaataaagggagcgacgaggtggaaaaattgaagacaaagttcttgtcagtgtgg
cacaatgtgaagtacagttgggctctcaaaccaaagacgtcattcagtagaaattctcct
gtgctgcttctgggaaaatgttaccattttaaggctgaagccacagatgaagagagtcct
actgaagcctctgttgaagaccttgttatgggggatgtggatgctttccggagggatttt
gcatcccgtgtctggctcacctacagggaagagttttcccctctgccaggcagcacgctg
acctctgactgtggctggggctgcatgctgagggctggtcagatgatgctggctcaagga
cttatgttgcatttcttgggaagagactggacttggtcagaagcactgacactccagcct
ttagacacagagacgtggactacaactgcagccaaacgtctggtggcctctctggaggct
tccctgcaaggtgtgcctggaccctctgtacgtagctcatcaccacaggcccaagcactt
tcccttggatctgcagaggaggcagatgcacatttaaaggagatgtaccaccgcactctg
gtgtcttggtttggagatagcccttcgactccactgggcctccacaggctcgtccgctta
ggcctgacaatgggaaaacaggccggggactggtacggaccagctgtggtggcacacatc
ctcaagaaagctgtcgaggaagcgatggaccctggtttggcgtgtataactgcctatgtc
tcccaagactgcacagtatacagcgctgatgtcgtcgattgccacagggcaccgagagca
gagcggacctctgatgagacaccagacgcccctactctgccacagaatgaccagccggcg
catgcttccaccttaccggagagccgagctgtaattatcctcgtccctgtgaggctcgga
ggggagaagacaaacccagagtattttgactttgcaaagagcattttgagtctggagtac
tgcataggcatcatcggagggaagcccaaacaggcctgctacttcgtaggatttcaagat
gacagcttgatttacatggaccctcattactgtcagtcttttgtggatgtcagcaccagc
gatttccctcttcagtcatatcattgcccctcgccaaagaagatgcctttcagcaagatg
gacccgagctgtaccgttggtttctattccagaagtgttcaagactacgagaggatcagt
caggagctgtctaagctgctgcagccatcagcgaaggagaaataccccgcgttcactttc
gtgcaaggtcacggcagagattacgacctgtcggcaggcctgacccctgaaaagagagag
tggcccttcatccgtgacccgcggaggacggtcaccaccgtcggggactttgtgctgctt
tga
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