KEGG   Oreochromis niloticus (Nile tilapia): 100710402
Entry
100710402         CDS       T06104                                 
Symbol
rfc2
Name
(RefSeq) replication factor C subunit 2
  KO
K10755  replication factor C subunit 2/4
Organism
onl  Oreochromis niloticus (Nile tilapia)
Pathway
onl03030  DNA replication
onl03410  Base excision repair
onl03420  Nucleotide excision repair
onl03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:onl00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    100710402 (rfc2)
   03410 Base excision repair
    100710402 (rfc2)
   03420 Nucleotide excision repair
    100710402 (rfc2)
   03430 Mismatch repair
    100710402 (rfc2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:onl03032]
    100710402 (rfc2)
   03036 Chromosome and associated proteins [BR:onl03036]
    100710402 (rfc2)
   03400 DNA repair and recombination proteins [BR:onl03400]
    100710402 (rfc2)
DNA replication proteins [BR:onl03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    100710402 (rfc2)
  DNA Replication Termination Factors
   ELG1-RFC complex
    100710402 (rfc2)
Chromosome and associated proteins [BR:onl03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    100710402 (rfc2)
DNA repair and recombination proteins [BR:onl03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     100710402 (rfc2)
  Check point factors
   HRAD17(Rad24)-RFC complex
    100710402 (rfc2)
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 RCF1-5-like_lid AAA_22 AAA_14 AAA_16 Viral_helicase1 Rad17 Mg_chelatase AAA_11 AAA_24 nSTAND3 RuvB_N AAA_assoc_2 AAA_18 AAA_19 DEAD MipZ AAA_5 ABC_tran DNAX_ATPase_lid AAA_30 AAA_28 RNA_helicase AAA_25 MeaB AAA_23 NTPase_1 SLFN-g3_helicase AAA_2 MCM PPR_1 FtsK_SpoIIIE bpMoxR DUF815
Other DBs
NCBI-GeneID: 100710402
NCBI-ProteinID: XP_003446060
Ensembl: ENSONIG00000014751
UniProt: A0A669AWQ2
LinkDB
Position
LG20:2339610..2353186
AA seq 357 aa
MDVEMAETECKQKPTESGQKADTEAGESSSKGSGSAYELPWVEKYRPLKLNEIVGNEETV
SRLEVFAREGNVPNIIIAGPPGTGKTTSILCLARALLGTSMKDAVLELNASNDRGIDVVR
NKIKMFAQQKVTLPKGRHKIIILDEADSMTDGAQQALRRIMEIYSKTTRFALACNASDKI
IEPIQSRCAVLRYSKLTDGQILVRLQEVVEKERLSVSDDGLEAIIFTAQGDMRQALNNLQ
STHSGFGYINSENVFKVCDEPHPLMVKSMLGHCVDGNIDEAYKVVEQLWALGYSPEDIIG
NIFRVCKTYQMAEYLKLEFIKEIGYTHMRIAEGVNSLLQMAGLLARLCSKTAPAAAS
NT seq 1074 nt   +upstreamnt  +downstreamnt
atggacgtggagatggcggagactgagtgtaagcagaaacccacagaaagcggacagaag
gcggacacggaggccggagagtcctcgtctaaaggctccgggagcgcttacgagctgccg
tgggtggagaaataccggccgctgaagctgaacgagattgtgggaaacgaggagacggtg
agcaggctagaggtcttcgccagagagggaaacgtccccaacataatcatcgcaggtcct
cccggcactggaaagaccaccagcatcttgtgtttggcccgcgctttgttgggaacctct
atgaaggacgccgtgctggagctgaacgcctccaacgacaggggcatcgacgtggtgagg
aacaagatcaagatgtttgctcagcagaaggtcacgctgcccaaaggacggcacaagatc
atcattctggacgaagccgacagcatgacagacggagctcagcaggcgctgaggaggatc
atggagatctactcaaagacaacacgcttcgctctcgcctgcaacgcctctgataagatc
atcgagccgatccagtcccgctgcgccgtgctgcggtactccaaactgaccgacggacag
atcctcgtccggctgcaggaagtggtggagaaagagcgcctctcagtgtccgacgatgga
ctggaggccatcatcttcactgcgcagggagacatgagacaggcgctgaacaacctgcag
tccactcactctggtttcggctacatcaacagtgagaacgtgtttaaggtgtgcgacgag
ccccatcccctgatggtaaaaagcatgttgggacactgcgtggacgggaacatcgacgag
gcctacaaagtcgtggagcagctgtgggcgctgggctattctccagaggacatcattggg
aacatcttcagggtctgtaagacctaccagatggccgagtacctgaaactggagttcatc
aaggagatcggctacacccacatgcggatagctgaaggtgtgaactccctgctgcagatg
gccggtctgctcgcacggctctgcagcaagacggcgcccgccgctgccagctaa

DBGET integrated database retrieval system