Oreochromis niloticus (Nile tilapia): 100710402
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Entry
100710402 CDS
T06104
Symbol
rfc2
Name
(RefSeq) replication factor C subunit 2
KO
K10755
replication factor C subunit 2/4
Organism
onl
Oreochromis niloticus (Nile tilapia)
Pathway
onl03030
DNA replication
onl03410
Base excision repair
onl03420
Nucleotide excision repair
onl03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
100710402 (rfc2)
03410 Base excision repair
100710402 (rfc2)
03420 Nucleotide excision repair
100710402 (rfc2)
03430 Mismatch repair
100710402 (rfc2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
onl03032
]
100710402 (rfc2)
03036 Chromosome and associated proteins [BR:
onl03036
]
100710402 (rfc2)
03400 DNA repair and recombination proteins [BR:
onl03400
]
100710402 (rfc2)
DNA replication proteins [BR:
onl03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
100710402 (rfc2)
DNA Replication Termination Factors
ELG1-RFC complex
100710402 (rfc2)
Chromosome and associated proteins [BR:
onl03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
100710402 (rfc2)
DNA repair and recombination proteins [BR:
onl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
100710402 (rfc2)
Check point factors
HRAD17(Rad24)-RFC complex
100710402 (rfc2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
RCF1-5-like_lid
AAA_22
AAA_14
AAA_16
Viral_helicase1
Rad17
Mg_chelatase
AAA_11
AAA_24
nSTAND3
RuvB_N
AAA_assoc_2
AAA_18
AAA_19
DEAD
MipZ
AAA_5
ABC_tran
DNAX_ATPase_lid
AAA_30
AAA_28
RNA_helicase
AAA_25
MeaB
AAA_23
NTPase_1
SLFN-g3_helicase
AAA_2
MCM
PPR_1
FtsK_SpoIIIE
bpMoxR
DUF815
Motif
Other DBs
NCBI-GeneID:
100710402
NCBI-ProteinID:
XP_003446060
Ensembl:
ENSONIG00000014751
UniProt:
A0A669AWQ2
LinkDB
All DBs
Position
LG20:2339610..2353186
Genome browser
AA seq
357 aa
AA seq
DB search
MDVEMAETECKQKPTESGQKADTEAGESSSKGSGSAYELPWVEKYRPLKLNEIVGNEETV
SRLEVFAREGNVPNIIIAGPPGTGKTTSILCLARALLGTSMKDAVLELNASNDRGIDVVR
NKIKMFAQQKVTLPKGRHKIIILDEADSMTDGAQQALRRIMEIYSKTTRFALACNASDKI
IEPIQSRCAVLRYSKLTDGQILVRLQEVVEKERLSVSDDGLEAIIFTAQGDMRQALNNLQ
STHSGFGYINSENVFKVCDEPHPLMVKSMLGHCVDGNIDEAYKVVEQLWALGYSPEDIIG
NIFRVCKTYQMAEYLKLEFIKEIGYTHMRIAEGVNSLLQMAGLLARLCSKTAPAAAS
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atggacgtggagatggcggagactgagtgtaagcagaaacccacagaaagcggacagaag
gcggacacggaggccggagagtcctcgtctaaaggctccgggagcgcttacgagctgccg
tgggtggagaaataccggccgctgaagctgaacgagattgtgggaaacgaggagacggtg
agcaggctagaggtcttcgccagagagggaaacgtccccaacataatcatcgcaggtcct
cccggcactggaaagaccaccagcatcttgtgtttggcccgcgctttgttgggaacctct
atgaaggacgccgtgctggagctgaacgcctccaacgacaggggcatcgacgtggtgagg
aacaagatcaagatgtttgctcagcagaaggtcacgctgcccaaaggacggcacaagatc
atcattctggacgaagccgacagcatgacagacggagctcagcaggcgctgaggaggatc
atggagatctactcaaagacaacacgcttcgctctcgcctgcaacgcctctgataagatc
atcgagccgatccagtcccgctgcgccgtgctgcggtactccaaactgaccgacggacag
atcctcgtccggctgcaggaagtggtggagaaagagcgcctctcagtgtccgacgatgga
ctggaggccatcatcttcactgcgcagggagacatgagacaggcgctgaacaacctgcag
tccactcactctggtttcggctacatcaacagtgagaacgtgtttaaggtgtgcgacgag
ccccatcccctgatggtaaaaagcatgttgggacactgcgtggacgggaacatcgacgag
gcctacaaagtcgtggagcagctgtgggcgctgggctattctccagaggacatcattggg
aacatcttcagggtctgtaagacctaccagatggccgagtacctgaaactggagttcatc
aaggagatcggctacacccacatgcggatagctgaaggtgtgaactccctgctgcagatg
gccggtctgctcgcacggctctgcagcaagacggcgcccgccgctgccagctaa
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