Oreochromis niloticus (Nile tilapia): 100710410
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Entry
100710410 CDS
T06104
Symbol
parpbp
Name
(RefSeq) PCNA-interacting partner isoform X1
KO
K27412
PCNA-interacting partner
Organism
onl
Oreochromis niloticus (Nile tilapia)
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
onl03400
]
100710410 (parpbp)
DNA repair and recombination proteins [BR:
onl03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
100710410 (parpbp)
TLS (translesion DNA synthesis) factors
Other TLS factors
100710410 (parpbp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD_C
Motif
Other DBs
NCBI-GeneID:
100710410
NCBI-ProteinID:
XP_003448137
Ensembl:
ENSONIG00000017803
LinkDB
All DBs
Position
LG17:complement(16896548..16916454)
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AA seq
590 aa
AA seq
DB search
MEGLGERLKLMVKTFRRECHRVLQSERTTIHGADGMLMVLQVAMAEVNKKHGGEFKVALS
DVLMAWKHLLLDKLHLPPPSSARLENYDLIVEAYESFLKRSNTIDLVDLLFMYEQLRLVD
SDAEEPVSPIQLFEFLSGNVEVPELPVSSVPSTPSGKGRSCSSQVKMAVRRVFCSYLNLL
VNTKNDIALALILDVPSRTLGRQAFTDIKHAAHNSNTSLFLAVTSFVRALQLGGKGYAPA
ESDPLRKHVKGLSDFVQFVDNLEEILGEIPDPSVCGARLVTTIRAVLVKGRSSGDAVYAA
AEETAQELKERICQLHQIQKQSANRSGTGISPARPKAYAVNHATAYGGRDTVKVLMALLD
EEALTPPCRNKADLLSEDQPVLSGAEGTCILTLFRSPEVSTGCSPEPLRNRVQSRLDLLK
PKVRERVIRSQFACTYNDEELPLNRVLDFPSTSQVPTCVHPAPKAKTTTSVDDGCSSDVE
DSTKAKSSECTNKARGEIQRGAALEQRSGNAPKQGASLVNGKRTGFQMQSRGNKRKQLDI
DQHGGSENEPPEKKQPTRTSVKMPGKNASKALSKKKLIAGQGKLTSFFRV
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atggagggtttaggagagcgactcaagctgatggtgaaaaccttcaggagggagtgtcac
cgggtcttacagtctgagaggaccaccattcatggagcggatggcatgcttatggtgctg
caggtggccatggcagaagtgaataaaaagcatggcggagagttcaaagtggctctgagt
gatgtcctgatggcctggaaacacttattgttagacaaacttcacctgccgccccccagc
tctgcacgcctggagaactatgatctcattgtggaggcatacgagtcgttcctgaaacgc
tccaacaccatcgacctggttgatctcctcttcatgtacgaacagctgaggctggtggac
tctgatgcagaggagcctgtgagcccgatccagctgtttgagttcctatcgggcaacgtg
gaagtcccagagttgccagtctcctcagtcccatcaaccccatctggtaaaggcagatcc
tgcagctcacaggtgaaaatggctgtgagacgtgttttctgctcctatctgaatttgctt
gtaaacaccaagaacgacatcgccttggcgctaattctcgacgttcccagtcgcactctt
ggacggcaggcgtttacagacatcaagcatgccgcacacaacagcaacacttctctgttc
ttggccgtgacgtctttcgttagggctctccagcttggagggaagggctatgctccagct
gaatctgacccactgagaaaacatgtcaaaggcctgtctgactttgtccagtttgtagac
aacctggaagaaatactgggggagatccccgacccaagtgtatgtggagccaggctggtg
accaccatcagggcggtgctggtgaagggtcgcagcagcggagatgctgtgtacgctgct
gctgaggagactgcacaggagctaaaggagaggatctgccagcttcaccagatccagaag
cagtctgctaatagaagcgggacggggataagtcctgcaaggccaaaagcgtatgcagtc
aatcacgctacagcatacggaggtcgtgacactgtgaaggtgctgatggcgctgctggat
gaagaagccctgactcctccgtgtcgaaacaaggccgacctgctgtccgaggatcagccc
gtcctcagtggagcagaggggacctgcatcctcacgctgttcagatcccctgaagtgtct
actggatgttctccagaacccctaaggaacagagtccagagccgactagacctgctcaaa
cccaaggtccgagaaagagtcatccgatcccagttcgcctgcacttacaatgacgaagag
ctccctctcaaccgtgtgctggacttcccgagcactagccaggttcctacttgcgtgcac
ccagcacccaaagccaaaaccaccacatctgtggatgatgggtgcagctctgatgtggaa
gactcaacaaaagccaagtcctctgaatgtacaaataaggcacggggtgagatacagcgg
ggggctgctctcgagcaaagaagtggaaatgccccaaaacaaggtgcaagcctggttaat
ggaaagagaactggctttcagatgcaaagcaggggtaacaagagaaagcagctggatatt
gaccaacatggtggatctgaaaatgagcctccggagaagaaacagccaactcgcacatca
gtcaaaatgcctggcaaaaatgccagcaaggccttgagtaagaagaagctcatagctgga
caagggaagctaaccagtttcttcagagtctaa
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