Oreochromis niloticus (Nile tilapia): 100710428
Help
Entry
100710428 CDS
T06104
Symbol
taf5
Name
(RefSeq) transcription initiation factor TFIID subunit 5 isoform X2
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
onl
Oreochromis niloticus (Nile tilapia)
Pathway
onl03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
100710428 (taf5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
onl03021
]
100710428 (taf5)
03036 Chromosome and associated proteins [BR:
onl03036
]
100710428 (taf5)
Transcription machinery [BR:
onl03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
100710428 (taf5)
Coactivators
SAGA/TFTC/STAGA complex
100710428 (taf5)
Chromosome and associated proteins [BR:
onl03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
100710428 (taf5)
STAGA complex
100710428 (taf5)
TFTC complex
100710428 (taf5)
SAGA complex
100710428 (taf5)
SLIK complex
100710428 (taf5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
TFIID_NTD2
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
Beta-prop_TEP1_2nd
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
WDR55
WD40_MABP1-WDR62_1st
NBCH_WD40
ANAPC4_WD40
Beta-prop_WDR75_1st
Beta-prop_IFT122_1st
Beta-prop_SCAP
Beta-prop_TEP1_C
Beta-prop_RIG_2nd
WDR90_beta-prop_4th
Beta-prop_Vps41
Beta-prop_IFT140_1st
Beta-prop_EIPR1
WD40_RFWD3
Beta-prop_DCAF4
Beta-prop_SPT8
Beta-prop_HPS5
Beta-prop_WDR19_1st
Beta-prop_DCAF12
WD_LRWD1
Beta-prop_Nup120_160
PROPPIN
VPS8_N
LisH_TPL
RAB3GAP2_N
Beta-prop_WDR11_2nd
LisH_PAC1
Motif
Other DBs
NCBI-GeneID:
100710428
NCBI-ProteinID:
XP_005458591
Ensembl:
ENSONIG00000018833
LinkDB
All DBs
Position
LG6:33270793..33276334
Genome browser
AA seq
750 aa
AA seq
DB search
MAAVQGGMGDADIKTDIKTEPSADGFGNNNANDGRVLSASPGSSSSTGSNKQTAAVTPED
QQTLLAVLQFLKKNKLSESVEILRREAGLPENSLDPKANESAGAGSGGAAGIVDLEGGDA
SSLLSRVTGSSSAGAQAPTKAVAEDQPDVSVVLSAYSQQGDPTLYKVYYRDLKKFIETVL
DCHRAELSQVFYPLFVHMYLELVYNNHESEAKAFFEKFSGDQECYYEEDLRILSGLTKKE
HMRGNETLLDFRTSKFVLRISRDSYQLLKRHLQERQNNQIWNIIQEHLYIDIFDGMPRSK
SQIDAMSGSLAGEAKREANKTKVYYGLLKEPEIELPLDDEDEEAENEEGKPKKKKPKKDS
VGSKSKKQDPNAPSQNRIPLPELKDSDKLDKIMYMKEATKRIRLGPDNLPSVCFYTFLNA
YQGLTAVDLTDDSSLIAGGFADSTVRVWSVTPKKLRKVKSAADLNLIDKESDDVLERIMD
EKTASESKIMYGHSGPVYGISFSPDRNYLLSSSEDGTVRLWSLLTFTCLVAYKGHNYPVW
DTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFSGHLADITCTRFHPNSNYVATGSSDR
TIRLWDVLSGNCVRIFTGHKGPIHSLAFSPNGKFLASGATDGRVLLWDIGHGLMVGELKG
HTDTIYSLRFSRDGEILASGSMDNTVRLWDAMKAFDDLETDDFTAATGHIHLQDNSQELL
LGTYTTKSTPVIHLHFTRRNLLLAAGAFNP
NT seq
2253 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgtacaaggtggtatgggcgacgcggacataaaaacagacattaaaacagaa
ccatcagccgatggctttggaaataacaatgctaacgatggtagagtgctctctgcgtct
cccggctccagctcttcgactggaagcaacaaacaaacagccgcggttaccccggaggac
cagcagacattgctggcagtcctgcaattcctcaaaaagaacaaactcagcgagtccgtc
gagattttgcgtcgtgaggcgggattaccggaaaattcactggacccgaaggcgaatgaa
tcggccggggcaggatcgggaggtgcagccggtattgtggacttagaaggcggggatgcg
agctctcttctcagccgagttaccggatcatcctccgccggagcccaggcgccaaccaaa
gcagttgcagaggaccagccagatgtcagtgtggtactgtcagcttacagccagcaggga
gatccaactctgtataaggtctactacagggacctcaagaagttcatagaaacagtattg
gactgtcacagagccgaactgtcccaggtcttctacccactttttgtccacatgtatctg
gagctggtgtacaacaaccatgaaagcgaggctaaggccttctttgaaaagttcagtggg
gaccaggagtgctactatgaagaggacttgcgcattttatctggcttgaccaagaaggag
cacatgagaggcaacgagactttgttggacttccgcaccagcaagtttgtcctgcgtatc
tcccgtgactcttatcagctgctgaagagacacctgcaggagcgtcagaacaaccagatc
tggaatattatccaagagcacctctacattgatatctttgatggcatgccacgcagcaag
agccagatagatgcaatgtctggcagcttggcaggagaggccaagcgtgaagccaataaa
actaaggtttactatggtttgctgaaggaaccagaaattgagctgccccttgatgatgag
gatgaggaggcagagaatgaggagggtaaacccaagaagaagaagccaaaaaaggacagc
gtgggctccaagagcaaaaagcaggatccaaatgctccttcccagaataggatacccctg
ccagaactcaaagactcagacaagctggacaagatcatgtacatgaaggaggccacaaaa
aggattcgtctaggaccagataacctcccctccgtctgcttctacacttttctcaatgca
taccagggtctgactgcagtggacttaactgatgactccagcctgatcgcaggaggcttt
gctgactccacagtacgagtgtggagtgtcacaccgaaaaagctccgcaaagtcaagtct
gcagcagacttgaacctgattgacaaagagtcagacgatgtgctggaaaggatcatggat
gagaaaacggccagcgaatcaaagataatgtatggacacagtggaccagtgtatggcatc
agcttcagcccggacagaaactacttgttgtccagttcagaagatggtactgtgaggtta
tggagtctcctaacgtttacctgtctggtggcctacaaagggcacaactacccagtgtgg
gacacacagttttctccctatggctactattttgtgtctggaggacacgacagggtagcc
cgactgtgggcgacagatcactaccagcctctgcggatattttctggtcacctggctgac
atcacttgcactcgttttcacccaaactccaattatgtggccacaggatcatctgaccgt
accatccgcctgtgggatgtcctaagtggaaactgtgtgcgcatcttcactggtcataag
ggtcccatccattcactcgctttttcccccaatgggaagtttttggcatcaggggccact
gatggcagagtcctcctgtgggacattggccatggattgatggtgggagagctcaagggc
catacagataccatctattccctcaggttcagcagggatggcgaaatccttgcttctggt
tctatggacaacacggttcgcctgtgggatgcaatgaaagcattcgatgacttggaaaca
gatgacttcacggcagctacaggacacatccatttacaagataactcccaggagcttctg
ctaggcacctacacgactaaatcaacacctgttatacaccttcacttcacccggaggaac
ctgcttctggctgctggagccttcaatccttga
DBGET
integrated database retrieval system
