KEGG   Oreochromis niloticus (Nile tilapia): 100710451
Entry
100710451         CDS       T06104                                 
Symbol
vim
Name
(RefSeq) vimentin
  KO
K07606  vimentin
Organism
onl  Oreochromis niloticus (Nile tilapia)
Pathway
onl04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:onl00001]
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    100710451 (vim)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:onl03019]
    100710451 (vim)
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:onl04812]
    100710451 (vim)
   04147 Exosome [BR:onl04147]
    100710451 (vim)
Messenger RNA biogenesis [BR:onl03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Factors involved in mRNA localization
    Factors that have mRNA localization signals
     100710451 (vim)
Cytoskeleton proteins [BR:onl04812]
 Eukaryotic cytoskeleton proteins
  Intermediate filaments
   Intermediate filaments
    Type III
     100710451 (vim)
Exosome [BR:onl04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   100710451 (vim)
  Exosomal proteins of other cancer cells
   100710451 (vim)
SSDB
Motif
Pfam: Filament Filament_head Myosin_tail_1 TolA_bind_tri DUF7491 DUF1664 ATG14
Other DBs
NCBI-GeneID: 100710451
NCBI-ProteinID: XP_003438114
Ensembl: ENSONIG00000009246
LinkDB
Position
LG18:complement(21157709..21162964)
AA seq 455 aa
MAYRSGPHSSYRKMFGGEKTAVRSNYSSRQFSIPVRSSRVSFGLSSTPTIYASKTQRLRS
SAAMPRLASENLDFSLSDAINSEFITNRTNEKAQMQSLNDRFANYIEKVRFLEQQNKILL
AELEQLRGKGTSRVGDLYEDEMRELRRQVDQLTNEKARVEVHRDNLGDDIDRLREKLQDE
ISQREESEANMQSFRQDVDNAALARLDLERKVESLQEEINFLKKLHDEEMLELQNQIHQQ
QHVQVDMDIAKPDLTAALRDVRLQYENLASKNIQESEEWYKSKFADLTEAAARNNEALRV
AKQESNDYRRQVQALTCEVDALKGTNESLERQMREMEENFSLETSGYQDTISRLEEDIHN
MKDEMARHLREYQDLLNVKMALDIEIATYRKLLEGEESRISTPLPNFSSLNLRETMVDSK
PLIETTTTKKVLIKTIETRDGQVINESTQNHDDMD
NT seq 1368 nt   +upstreamnt  +downstreamnt
atggcctatagatcaggtccacattcctcttaccgaaagatgttcggcggggagaaaacc
gccgtaaggtccaactactcgagccgccagttttcgatcccggtgcgctcctcccgggtt
tccttcgggctctcctccaccccgaccatatacgcgtcgaagacccagaggctccggagc
agtgcagccatgccccggctggcatccgagaacttggacttctccttgtctgacgccata
aactccgaattcatcacgaaccgcaccaacgagaaggcgcagatgcagtccctcaatgac
cgcttcgccaactacatcgagaaggttcgcttcttggagcagcaaaataagatcctactg
gcggagctggagcagctgcggggcaaagggacgtcccgggtcggagatctttacgaggac
gagatgagggagctgagacgccaggtggaccagctcaccaacgaaaaggcccgcgtggaa
gttcaccgggataacctgggggacgacatcgacaggctgagagagaagttgcaggatgaa
atttcccagcgggaggagtctgaggcaaacatgcagagctttagacaggatgtggacaac
gctgccctcgccagactggacctggagcggaaagtggagtcactccaagaggaaatcaac
ttcctcaagaagctgcatgatgaggaaatgttggagctgcaaaatcagatccatcagcag
cagcatgtgcaggtggacatggatatagctaagcctgacctgacagcggctctgagggac
gtccgtctgcagtatgagaacctggcctccaaaaacatccaggaatcagaggaatggtac
aaatccaagtttgctgacctcactgaagctgcagctaggaataatgaagctctgagagtg
gccaaacaggagtccaatgattacagacgccaagttcaggcacttacttgtgaagtggat
gccctgaaaggaactaatgagtccttggagcgccagatgagggagatggaggagaacttc
tccttggagacgagcgggtaccaggacaccatcagccgtctggaggaggacattcacaac
atgaaggatgagatggcccgtcacctccgcgagtaccaggacctgctaaatgtcaagatg
gctctggacattgagattgccacctatagaaagctgctggaaggagaggagagcagaatc
tccacccccttgccaaacttctcatctcttaacctgagagaaacaatggttgactccaaa
ccacttatcgaaaccacaacaaccaagaaagtcctcatcaagaccattgagaccagggat
ggtcaggtgatcaacgagtcgacccagaaccacgatgacatggactaa

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