Oreochromis niloticus (Nile tilapia): 100710451
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Entry
100710451 CDS
T06104
Symbol
vim
Name
(RefSeq) vimentin
KO
K07606
vimentin
Organism
onl
Oreochromis niloticus (Nile tilapia)
Pathway
onl04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
100710451 (vim)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
onl03019
]
100710451 (vim)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
onl04812
]
100710451 (vim)
04147 Exosome [BR:
onl04147
]
100710451 (vim)
Messenger RNA biogenesis [BR:
onl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Factors that have mRNA localization signals
100710451 (vim)
Cytoskeleton proteins [BR:
onl04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Type III
100710451 (vim)
Exosome [BR:
onl04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
100710451 (vim)
Exosomal proteins of other cancer cells
100710451 (vim)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Filament
Filament_head
Myosin_tail_1
TolA_bind_tri
DUF7491
DUF1664
ATG14
Motif
Other DBs
NCBI-GeneID:
100710451
NCBI-ProteinID:
XP_003438114
Ensembl:
ENSONIG00000009246
LinkDB
All DBs
Position
LG18:complement(21157709..21162964)
Genome browser
AA seq
455 aa
AA seq
DB search
MAYRSGPHSSYRKMFGGEKTAVRSNYSSRQFSIPVRSSRVSFGLSSTPTIYASKTQRLRS
SAAMPRLASENLDFSLSDAINSEFITNRTNEKAQMQSLNDRFANYIEKVRFLEQQNKILL
AELEQLRGKGTSRVGDLYEDEMRELRRQVDQLTNEKARVEVHRDNLGDDIDRLREKLQDE
ISQREESEANMQSFRQDVDNAALARLDLERKVESLQEEINFLKKLHDEEMLELQNQIHQQ
QHVQVDMDIAKPDLTAALRDVRLQYENLASKNIQESEEWYKSKFADLTEAAARNNEALRV
AKQESNDYRRQVQALTCEVDALKGTNESLERQMREMEENFSLETSGYQDTISRLEEDIHN
MKDEMARHLREYQDLLNVKMALDIEIATYRKLLEGEESRISTPLPNFSSLNLRETMVDSK
PLIETTTTKKVLIKTIETRDGQVINESTQNHDDMD
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atggcctatagatcaggtccacattcctcttaccgaaagatgttcggcggggagaaaacc
gccgtaaggtccaactactcgagccgccagttttcgatcccggtgcgctcctcccgggtt
tccttcgggctctcctccaccccgaccatatacgcgtcgaagacccagaggctccggagc
agtgcagccatgccccggctggcatccgagaacttggacttctccttgtctgacgccata
aactccgaattcatcacgaaccgcaccaacgagaaggcgcagatgcagtccctcaatgac
cgcttcgccaactacatcgagaaggttcgcttcttggagcagcaaaataagatcctactg
gcggagctggagcagctgcggggcaaagggacgtcccgggtcggagatctttacgaggac
gagatgagggagctgagacgccaggtggaccagctcaccaacgaaaaggcccgcgtggaa
gttcaccgggataacctgggggacgacatcgacaggctgagagagaagttgcaggatgaa
atttcccagcgggaggagtctgaggcaaacatgcagagctttagacaggatgtggacaac
gctgccctcgccagactggacctggagcggaaagtggagtcactccaagaggaaatcaac
ttcctcaagaagctgcatgatgaggaaatgttggagctgcaaaatcagatccatcagcag
cagcatgtgcaggtggacatggatatagctaagcctgacctgacagcggctctgagggac
gtccgtctgcagtatgagaacctggcctccaaaaacatccaggaatcagaggaatggtac
aaatccaagtttgctgacctcactgaagctgcagctaggaataatgaagctctgagagtg
gccaaacaggagtccaatgattacagacgccaagttcaggcacttacttgtgaagtggat
gccctgaaaggaactaatgagtccttggagcgccagatgagggagatggaggagaacttc
tccttggagacgagcgggtaccaggacaccatcagccgtctggaggaggacattcacaac
atgaaggatgagatggcccgtcacctccgcgagtaccaggacctgctaaatgtcaagatg
gctctggacattgagattgccacctatagaaagctgctggaaggagaggagagcagaatc
tccacccccttgccaaacttctcatctcttaacctgagagaaacaatggttgactccaaa
ccacttatcgaaaccacaacaaccaagaaagtcctcatcaagaccattgagaccagggat
ggtcaggtgatcaacgagtcgacccagaaccacgatgacatggactaa
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