Oreochromis niloticus (Nile tilapia): 100710772
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Entry
100710772 CDS
T06104
Symbol
hnrnpa1
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein A1
KO
K12741
heterogeneous nuclear ribonucleoprotein A1/A3
Organism
onl
Oreochromis niloticus (Nile tilapia)
Pathway
onl03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100710772 (hnrnpa1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
onl03019
]
100710772 (hnrnpa1)
03041 Spliceosome [BR:
onl03041
]
100710772 (hnrnpa1)
Messenger RNA biogenesis [BR:
onl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
100710772 (hnrnpa1)
mRNA cycle factors
Common to processing body (P body) and stress granule
100710772 (hnrnpa1)
Spliceosome [BR:
onl03041
]
Common components
Common spliceosomal components
hnRNP proteins
100710772 (hnrnpa1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
Nup35_RRM_2
RBD_AKAP-17A
RRM_3
Motif
Other DBs
NCBI-GeneID:
100710772
NCBI-ProteinID:
XP_003448307
Ensembl:
ENSONIG00000012248
UniProt:
I3K2T0
LinkDB
All DBs
Position
LG20:complement(19130507..19133287)
Genome browser
AA seq
332 aa
AA seq
DB search
MSRESVPREPEQLRKLFIGGLSFETTDESLRAHFEQWGTLTDCVVMRDPNSKRSRGFGFV
TYSSVQEVDAAMSARPHKVDGRVVEPKRAVSREDSNRPGAHITVKKIFVGGIKEDTEESH
LRDYFQQFGKIEVIDIMTDRNTGKKRGFAFVTFDDHDSVDRIVIQKYHTINSHNCEVRKA
LTKQEMQSAGMGMGMRGGRNTGGRPYDYDRGFNQGGRGRYGDGPYNCNGSDGGYGGGPGG
PGGYNGGNRGYNQGYNQGGGYGGNGYDSNGYGNCGGGGGGGGGNNYNNMGHYDPQASNFG
PMKGNFGGGGGGRNFGGYGGSNNSGYGRPGRF
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagagagagtgtcccacgtgagccggagcagctccgcaagctgttcatcggaggc
ttgagcttcgagacgacagacgaaagcctgcgtgctcattttgagcaatgggggaccctt
acagactgcgtggtcatgagggaccccaacagcaagcgatccaggggttttggctttgta
acatattcatcagtgcaggaagttgatgctgccatgtcagcccgtccccataaggtcgat
ggaagagtggtagagccgaaacgagcggtttccagggaggactcaaaccggccaggagcc
cacataactgtgaaaaagatctttgttggaggcatcaaagaagatacagaggagtcacac
ctgagggattatttccagcagtttggcaaaatagaagtcattgatatcatgactgaccgc
aacactgggaagaagaggggctttgcctttgttacgtttgatgaccacgattcagttgat
aggattgtcatccagaaataccacactatcaactctcacaactgtgaggtgaggaaggcc
ctcacaaagcaggaaatgcagagtgcgggaatgggtatgggaatgagaggaggtcgcaac
actggtggcaggccctacgattacgacaggggcttcaatcaaggtggcagagggcgatat
ggagatggtccttacaattgcaacggaagtgatggtggctatggaggcggacctggtggt
cctggtggctataatggaggtaaccgtggttacaaccagggctacaaccagggtggtgga
tatggaggaaatggttatgacagcaatggttatggcaattgtggtggtggtggaggcggc
ggtggcggcaataactacaacaacatgggccactacgacccccaggcctctaactttggc
cccatgaagggcaactttggtggcggcggcggcggcaggaactttggtggatacggaggc
tcaaacaacagtggctatggacgtccaggacgattttaa
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integrated database retrieval system
