KEGG   Oreochromis niloticus (Nile tilapia): 100710937
Entry
100710937         CDS       T06104                                 
Symbol
wdr61
Name
(RefSeq) WD repeat-containing protein 61
  KO
K12602  WD repeat-containing protein 61
Organism
onl  Oreochromis niloticus (Nile tilapia)
Pathway
onl03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:onl00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    100710937 (wdr61)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:onl03019]
    100710937 (wdr61)
Messenger RNA biogenesis [BR:onl03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Ski complex
     100710937 (wdr61)
SSDB
Motif
Pfam: Beta-prop_EML_2 WD40 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz WDR55 EIF3I Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd Beta-prop_TEP1_2nd ANAPC4_WD40 Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_1st Beta-prop_TEP1_C Beta-prop_EML Beta-prop_WDR75_1st WDR90_beta-prop_4th Beta-prop_IFT122_1st Beta-prop_SCAP Beta-prop_RIG_2nd Beta-prop_WDR19_1st eIF2A Beta-prop_Vps41 Beta-prop_WDR35_TULP_N Beta-prop_EIPR1 WD40_RFWD3 Beta-prop_NWD2_C Beta-prop_DCAF4 Beta-prop_HPS5 Beta-prop_SPT8 Beta-prop_IFT140_1st PROPPIN Beta-prop_Nup120_160 NBCH_WD40 Ge1_WD40 Cytochrom_D1 Beta-prop_WDR75_2nd WD40_like WDR54 VPS8_N Beta-prop_VPS8 Beta-prop_DCAF12 Vgb_lyase DUF2415 GSDH Beta-prop_IFT122_2nd
Other DBs
NCBI-GeneID: 100710937
NCBI-ProteinID: XP_003447564
Ensembl: ENSONIG00000012845
UniProt: A0A669CCH8
LinkDB
Position
LG7:complement(44285545..44295069)
AA seq 305 aa
MSTQYSILFKQEHAHDDAIWTAAWGKSEADGSETIVTGSLDDMVKVWKWSDEKLELQWTL
EGHQLGVVSVDISHNGAIAASSSLDAHIRLWDLESGKQIKSMDAGPVDAWTVAFSPDSKY
IATGSHLGKVNIFGVDSGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATG
KLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHGSWVLSVAF
SPDDTHFVSSSSDKSVKVWDAGSRACINTFFDHQDQVWSVKYNSTGSKIISAGDDRAIHI
YDCPM
NT seq 918 nt   +upstreamnt  +downstreamnt
atgagcactcaatacagcattttgttcaagcaagaacacgcacacgacgatgccatctgg
acagcagcgtggggtaaaagtgaagcagacggctcagaaaccatcgtcacaggctcactc
gatgacatggtgaaagtctggaaatggtcagatgagaagctggagctgcagtggacgctg
gagggccaccagctgggggtggtgtcagtagacatcagtcacaatggggccatcgctgcc
tccagctctctcgacgcacacatccgtctctgggaccttgagtccgggaaacagataaag
tcgatggacgctgggccagtggatgcatggacggtggccttctcaccagactccaagtac
attgccacaggaagccatcttggcaaggtcaacatctttggcgtagacagtggaaagaag
gaatattctttggacacgcgaggaaagttcatcctgagcatagcttacagcccagatggc
aagtatttggccagcggagctatcgatggaatcattaacatctttgacatcgccactgga
aagctactccacacgctggaaggtcatgccatgcccatcagatccctcaccttctccccg
gactcccagctcctggtgacagcttcagacgacggctacattaaaatatatgacgtgcaa
cacgccaacctggccggcacactaagcggccacgggtcctgggttctcagtgtcgccttc
tctcctgatgacactcattttgtctcaagctcgtctgacaagagtgtgaaggtgtgggac
gccggctccagagcatgcatcaacacattcttcgaccatcaagaccaggtgtggagcgta
aagtacaacagcaccggctcaaagatcatctcagctggggacgaccgtgccatccacatc
tacgactgtcccatgtga

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