Oreochromis niloticus (Nile tilapia): 100711095
Help
Entry
100711095 CDS
T06104
Name
(RefSeq) lumican
KO
K08121
fibromodulin
Organism
onl
Oreochromis niloticus (Nile tilapia)
Pathway
onl04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
100711095
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
onl00535
]
100711095
Proteoglycans [BR:
onl00535
]
Extracellular matrix (ECM) proteoglycans
Small leucine-rich proteoglycan (SLRP) family
class II
100711095
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_1
LRR_4
LRR_6
LRR_5
LRRNT
Motif
Other DBs
NCBI-GeneID:
100711095
NCBI-ProteinID:
XP_003441559
Ensembl:
ENSONIG00000019285
UniProt:
I3KT24
LinkDB
All DBs
Position
LG5:24997730..25012875
Genome browser
AA seq
368 aa
AA seq
DB search
MSMALLCSGLLFLLSGFQSASATFVADMDYGGIPLWINRLLGEPSVLSLQGRMDPAWFRA
NNPQPCPEECDCPIQWPTALYCDQRALAHIPDSLPDRTQYLFLQGNNISTLSSSVLANVT
GLRWLILDNNQLESDKLKQDSLQSQTQLWYFFANHNHLSSVPSALPAGLKQLRLAYNQIS
SISPEAFQNMHSLALLLLQGNRLNTITEGDLRGLVSLNLLDLSGNSFSTIPRHLPSSVEQ
LYLSNNSLTGLDEDSFEGFLNLKYLRLSHCGLQNRGVHSQVFNHSSLVELDLSYNKLTAI
PTVPTTLQYLYLEANKIQEFNVTSFCREVGPQSYSKMKFLRLDGNKISYHQLPPDWVFCL
RVLQRIYI
NT seq
1107 nt
NT seq
+upstream
nt +downstream
nt
atgtccatggctcttttgtgctctggcctcctgtttctgctgagtggttttcagtctgct
tcagccacatttgtagctgatatggactatggaggcattcctctgtggattaaccgcctg
ctaggtgagcccagtgtgttgagtctgcaggggcgaatggatccagcctggttccgcgct
aataatccgcagccctgccctgaagagtgtgattgccccatccagtggcccacagcactc
tactgtgaccagagagccttggcacacatccctgacagcctgccggacagaactcaatac
ctgtttctacagggcaacaacatctcaaccctgtcctcctctgtgctggccaacgttacc
gggcttcgatggctcattctggacaacaaccaactggagagcgacaagctgaagcaggac
tctttacagagccagacccagctgtggtacttctttgctaaccacaaccacctgagttca
gtgcccagtgctttaccagctggactcaaacagctgcgactggcctacaaccaaatcagc
agcatcagcccagaagctttccagaacatgcatagcctggcattgctgctgctgcaggga
aacagactgaataccatcacagagggagacctcagaggtctggtcagtctgaacctgttg
gacctcagcgggaattcattttcaaccattcccaggcacttaccttcctccgttgagcag
ctctatctgtcaaacaactctctcactggactggatgaggacagtttcgagggatttctc
aaccttaagtatctacgcctaagtcactgtggcctgcagaaccgtggggtccactcgcag
gtctttaaccactccagcttggtggagctggacctttcatataataaactcactgctatt
cccacagtccccaccaccctccagtacctctacctggaggccaataaaatacaagagttc
aatgtgaccagtttctgcagagaggtgggacctcagtcttactccaagatgaagtttcta
cgattggatggaaacaaaatatcctaccatcagctgcctcccgactgggtgttctgcctg
cgagtccttcaacgtatttacatctga
DBGET
integrated database retrieval system