Oreochromis niloticus (Nile tilapia): 100711135
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Entry
100711135 CDS
T06104
Symbol
ttc37
Name
(RefSeq) LOW QUALITY PROTEIN: tetratricopeptide repeat protein 37
KO
K12600
superkiller protein 3
Organism
onl
Oreochromis niloticus (Nile tilapia)
Pathway
onl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
100711135 (ttc37)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
onl03019
]
100711135 (ttc37)
Messenger RNA biogenesis [BR:
onl03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
100711135 (ttc37)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_2
TPR_1
TPR_19
TPR_16
TPR_11
TPR_8
TPR_CcmH_CycH
TPR_17
TPR_14
TPR_12
TPR_9
ANAPC3
ARM_TT21_N
ChAPs
Fis1_TPR_C
TPR_MalT
TPR_15
DUF6979
COG4_N
PAS_4
Motif
Other DBs
NCBI-GeneID:
100711135
NCBI-ProteinID:
XP_005457546
Ensembl:
ENSONIG00000011818
LinkDB
All DBs
Position
LG12:14572242..14589259
Genome browser
AA seq
1564 aa
AA seq
DB search
MSNKEVKAALKSAREAIKNKEFKEALKHCKTVLKIEKNNYNAWVFIGLSASELDQPDQSQ
AAYXKAVELEPEQLLAWQGLANLYDKTDQWDFKVELPNVYQKLVELYASSDKNKCYEVID
KLTEIYESDKEYLKLARVWLQLIQLKEEEPVDKKELVQLLQKMTQLLSDCLKEVEQDSET
QQHLITAFEKALVLIDPVPGEDHKKVSADYVKCLSLLPQEEARMTAACQSMISLYPNQSY
PLEVLCHHYLKTGNFNEEAVSSFSRLMDLVPDSGLGHLCLGTKALLEGRYKDAIDDLTQG
LKKMSSTTGWYSLAEAQFKIYRYADSATSCSQGLNVCDSEEKELRIRLLRLKLEALVRSG
GEKAGEQALETFKQIPEAEKDPVLLALKGRAYLNKGQTDQALKVSSELVASNPNLAQGLA
LKGLVHFAKGEKQLAEQSFLKAASQSPDCGEYFFLLGQLYWDMGEETRKDRSKAHTHLLK
AAKLDPHLGCVFRYLGHYYRDIAKDYGRAQGCYKKAFQLDSEDVESGAASVDLSMGQGDM
DTALAILQSVLEKATPGSAKWAWMRRGLYYLKVGENQQAIADLQAALRADPEDWVCWECL
GEAYLNRRSFTAALKAFGKAHQLQPCSIYSVYQAAAIKQTLGKFKEAVAEYLLITAKQDY
VPALKGLGECQLSLAKSLMQDCRDGGATDLIQQAIQNLFRAVQLRPDLSCLWKLLGDACT
AVSTVSPNRATVIVPALLAGLDANTENQMLNQAQTLKVGERCYAHALKLMPEVASLWYDL
GLNYYHQASLTQNDQNSPAMDIEKAQQCLKKAIMMDSSNHSYWNALGVVSMNKGLENYAL
AQHCFIKSIQVEPNNVVAWTNLGSLYLKKENIELAHEAFKIAQSLEPLYVNCWIGQALIA
ERVGSYDTMDLFRHTTELSTHMEGVKGYAFWVCSTLLDKSNRDSELYRYNIVQMNAISAA
QVALSKYTERIQSDPDAFIMLGYLNEHLQLKRQALQAYQRAVELLQSMSSSEELAFSLGS
YGRALCTSGQWEEAVHVYNSTPLQELSDLVGLALAYCKAGLISESISAYERALAVASSEK
EKAYVLTALALLQHQQGNLDSAKTLLFKCSMLKEPISESLVCLCALGLAHRDATLAAAAL
TELLKQGSASGSAIEQRCLLTCTLLAVQGNFSAVPREVSRAVHSNPGNASLWALLSRVVP
QYYPRKANGGAVAGHVACLSSMTQGKRALLYSGVNQLASGRHSGEDSKKNALKTMQRAVL
LCPDDPATWAGLMAACYTENTSCYLSGSAPRRQALQQTLMSVVSEKVRSVDEIERPLAQA
LEGWVLQQAVTGLMLEGQLEQAEVLCTQVLNVSPEHAAVMLSLRQVQCQRLLMTDGGTVL
PEPVLEQLSSAVMMNPTNLGAWHWLAEVYRSQGLLVQAVMAYRQSLQLASQLGMHSCQVA
SLLRLALLALGPCMVGVPGNDWKDLVLEATTEVLKLDSSPVALLFQALLQFVTKMAARET
RRLLERLVYIQDIPATVVQVASWYLLRHLHAKNDEELMKVLLQHAKMNRDERLLEFHSVL
NSSS
NT seq
4695 nt
NT seq
+upstream
nt +downstream
nt
atgtctaataaagaagtgaaagctgcgctgaaaagtgccagagaggccattaaaaacaaa
gaattcaaagaagctctaaaacactgcaagactgttttgaaaattgagaaaaacaattac
aatgcttgggtcttcatcggcttgtcagccagtgagctggatcaaccggatcagtcacag
gcagcctatnaaaaggcagtggagctggagccggagcagctgctggcttggcagggcttg
gcaaatttgtatgataagactgatcagtgggacttcaaagttgagctgcctaatgtctac
cagaaacttgttgagttgtatgcaagctcagacaaaaacaaatgttatgaggtgatcgac
aaactgacagaaatttatgagtctgacaaagaatatttaaagctggccagggtttggctg
cagctcatacagctgaaggaagaggaacccgtggataagaaggagttagtgcagctattg
caaaagatgacccagctcctctcagactgtcttaaggaggtggagcaggatagtgaaact
cagcagcatttaatcacagcatttgagaaagctctggttctcatcgatcctgtaccagga
gaggaccacaagaaggtctcagctgactatgtcaaatgtctttctctactaccacaagaa
gaagccagaatgactgcagcatgtcagtccatgatttccctctaccccaaccaaagttat
cctcttgaggttctttgtcatcattaccttaaaacaggaaactttaatgaggaggcagtt
agctctttctcccgcctcatggatctggtccctgacagtggattgggtcatttgtgtctg
gggacgaaagcattgctggaaggaaggtataaagatgccattgatgaccttacacaagga
ttgaagaaaatgagctcaactacaggatggtacagtctggctgaagcccagtttaaaatt
tacagatacgctgacagcgctacatcatgctcacaaggtttgaatgtgtgtgactctgaa
gagaaagagctgaggatcagacttcttcgactaaaactagaggctttagtgagaagtgga
ggagagaaagctggagagcaggctttggagacatttaaacagattccagaagctgaaaaa
gacccggttctgttagcccttaaaggacgtgcataccttaacaaaggacagactgatcaa
gcacttaaggtgtcatcagaactggtggcttccaacccaaacctagcccaaggattggct
ctgaaaggactggtgcactttgctaaaggtgaaaagcagctggcagagcagagtttccta
aaggctgcaagtcagagcccagactgtggagagtatttttttttgcttggacagctctac
tgggacatgggagaagagacccgtaaagaccggagcaaagctcacacacatttgctgaag
gctgcaaagctagatccacaccttggctgtgtattccgctacctggggcattattatcgg
gacattgcaaaggattatggccgtgcacaaggctgctacaaaaaggcctttcaactggac
agtgaagatgtggagtctggcgctgcctcggtggatctcagtatggggcagggagacatg
gacactgccttagccattcttcagtctgtgttagagaaagccactccaggctcggctaaa
tgggcctggatgagacgaggcctttactacctgaaagttggagaaaatcaacaggccata
gcggacctgcaggccgctttaagagcagacccagaggactgggtgtgttgggagtgttta
ggtgaagcatatctaaaccgccggagcttcacagcagctctgaaagcttttggtaaagcc
catcagcttcagccctgctccatctacagtgtctaccaggctgctgcaatcaaacagact
ctgggcaagttcaaagaggctgtcgcagagtacttgctgatcacagcaaagcaggactat
gtccctgctcttaaaggtcttggggagtgccagctgtctctggcaaaaagtttaatgcag
gactgcagagatggaggagccactgacctcattcagcaagcaatacagaacctcttcaga
gctgtacagctgcgaccagacctttcctgcttgtggaagctgctgggcgatgcttgcact
gcagttagcaccgtctccccaaacagagccacggttatagtgccagccctacttgctggt
ttagatgccaacactgagaaccaaatgctcaaccaggcccagacactaaaagtcggcgag
aggtgctatgctcatgctttgaagctgatgcctgaagttgccagtctttggtatgacttg
gggctcaactattatcaccaggccagccttacacagaatgaccagaactccccagctatg
gacatagagaaggcccagcagtgtttaaaaaaagccatcatgatggacagcagcaaccac
agctactggaatgccctaggagttgtttccatgaacaaaggtcttgagaactatgctctg
gctcagcattgcttcatcaagtccatccaagttgagcctaataatgttgtggcctggaca
aaccttggtagcctgtatctgaagaaggaaaatatagagcttgcacacgaggccttcaag
attgctcagtccttggagccactttatgtcaactgctggatcggacaggcgctgatagca
gaacgcgtgggaagctatgacaccatggatcttttcaggcacaccactgaactcagcaca
catatggaaggcgtgaaaggatatgccttctgggtttgctccacgctgctggataagagc
aacagagactcagaactgtaccgttacaacatcgtgcagatgaatgccatctctgctgct
caggtggcactcagcaagtacacagagaggattcaatcagatcctgatgccttcattatg
ctgggctatctgaatgagcatctgcagctgaagagacaggccttacaggcttaccagaga
gcggttgaactgcttcagtccatgtcctcttcagaagagttggcattctctctgggcagc
tatggccgtgcattgtgcacttcaggtcagtgggaggaggctgtgcatgtttataattcc
actccactgcaagagctcagtgacctggttgggttggctctggcctactgcaaggcagga
ctcatctcagagagcatcagcgcctatgaacgcgccttggctgtggcttctagtgagaag
gaaaaggcttatgtactgacagctctggccttgctgcagcaccagcagggtaacctagac
tcagccaagactctgctgtttaaatgttcgatgttaaaggagccgatttcagagtccctg
gtttgcttatgtgcgctcggattggcccaccgcgatgctacacttgctgctgctgcgctt
actgagctcctaaagcaaggttcagcctctgggagtgctatcgagcaacgatgtctactc
acctgcaccttgttggctgtgcaggggaattttagtgcagtgccaagggaggtttcaaga
gctgtgcacagcaatcctggaaatgcttctttgtgggcgcttctgtccagagtggttcca
cagtactaccctagaaaggcaaatggtggtgcagtagctggccatgttgcctgtctctcc
agtatgacccaaggaaagagggcgttgttgtacagtggagtgaaccagctggccagtggc
agacactctggagaggacagtaagaagaatgcattgaagactatgcagagagctgtgctg
ctctgtcctgatgatccagcaacgtgggccggattaatggctgcttgttacaccgaaaac
acttcctgttatctttctggttctgctcctcgcagacaagcgctgcagcagacccttatg
tcagtggtttctgagaaagtgcgtagtgtggatgaaatagagcggcctctagctcaggct
ctggaaggatgggtgctacaacaggcagtgactggtctcatgctggagggacagctagag
caagcagaagtcctatgcacacaggtcttgaatgtgtcccctgagcacgcagcagtgatg
ttatcactgaggcaggtgcagtgtcagcgcctccttatgactgatggtggtactgtcctc
ccagagcctgtgttggagcagctcagcagtgctgtgatgatgaaccctaccaaccttggg
gcatggcattggctggctgaggtgtatcgcagccagggcctactggttcaggcggtcatg
gcttacagacagagtctccagctggcctcgcagcttggcatgcacagctgccaggtagcc
agcctcctccgactagccctgctagctctcgggccttgtatggtgggtgtcccaggaaat
gactggaaggacttggtgctggaagctactactgaggtcttgaagctggactcatcccct
gtggcccttcttttccaggctctgctccagtttgtgacaaagatggctgctagggaaaca
agacgcttgctggagaggctggtttacattcaagatataccagcaacagtggtgcaggtg
gccagttggtatctcctgagacacctgcatgccaaaaacgacgaggaactcatgaaggtc
ctattgcagcatgccaaaatgaacagagatgaaagattgctggagtttcattcagtcctc
aactcttcatcctga
DBGET
integrated database retrieval system
