Oreochromis niloticus (Nile tilapia): 100711155
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Entry
100711155 CDS
T06104
Symbol
gigyf1
Name
(RefSeq) LOW QUALITY PROTEIN: GRB10-interacting GYF protein 1
KO
K18730
PERQ amino acid-rich with GYF domain-containing protein
Organism
onl
Oreochromis niloticus (Nile tilapia)
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
onl03019
]
100711155 (gigyf1)
Messenger RNA biogenesis [BR:
onl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
100711155 (gigyf1)
Surveillance factors
Other surveillance factors
100711155 (gigyf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GYF
GYF_2
Motif
Other DBs
NCBI-GeneID:
100711155
NCBI-ProteinID:
XP_013121116
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All DBs
Position
LG3:8386007..8411553
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AA seq
1066 aa
AA seq
DB search
MTAETLNFGPEWLRALSSGGSVTSPPPSPAMPKYKLAEYRYGREEMLALYVKDNKVPEDM
QDKEFAAILQEEPMQPLALVPLTEEEQRNFSMSVNSVAVLRLMGKGVGGAAPAGVVRGRG
ATRGGRGRGRGEGGFYQRSIEDAEVGFSRSVREIHRSQSWDDRGERRFEKPLRREXGRPG
FEETGVPGGPGRKEYTRADSDNWRTLREEQEEDEGEPGSNWRLAGSRRDDGGPRSAGWRD
HSGPGEGRRRKFDFDFRDSDGHGGGRRRAGSDGLEDDRDGLPEWCTDEEDGEMGTFDSSG
AFMPMKKSGKETILEEFEFKGIEEEEEEGDSLADMERNSAEGDKDKEIKEAISVVGDGET
KPASPSSSPTAHCPPPSLESQPSSACQVVDSAQLSNSQSVKASSTPGEDAAPLGGSKAQL
SPSAAATSSSLPPPPPSSAAPLLPPSGGDAEDDEGMKHLQQEAEKMVASLQDTSLEEECF
TQALQQQESRNTAAALPLSHEAAMKWFYKDPQGEIQGPFTTVEMCEWFQAGYFTMTLLVK
RGCDEGFQPLGDVIKMWGRVPFAPGPSPPPLLVRQLPPTQRPQPNRGPAGTGNLDQERLK
KQQELAAAALYQQLQQQQQLFQLMNRCSEQSMMPSMNRSMSVPDTGSMWDMHTSASQPSG
GEASLWDITMNPSTQGPTLEQLQKLQQERRDAELRAKREEEEQRKRREEKRRQQEEQKRR
EEEEIFRRKQCRQQQELIMKLLQQTPQQQGPGAGSSSWSGASSSGLSKAGKPQALALLEI
QQETERLLKQQQRAQQQRDRHSGLSMGSSSMGGQWVDGVGMWGGPGSLESKSSSGGSSGS
MGMWDEAVKNQTGLRGNSNNNMGLKNSRSSPSLSDQYMIRRKRTEEEEKLLKLLQGMKPQ
DGFTTWCEQMLHALNTSANNSSSSVDVATIVAYLKEVESPYAVLDFIRSYLGDTVEAKEF
AKQFLERRAKQKANQQRQQQQLSKEVAGLNMNFPLQDSMRGMNPNTLQSMFQANHMGKAG
LYDNQGGKMKKKQPMMLHSDPSILGYSFHNTGECMSLNEMEMVEDY
NT seq
3201 nt
NT seq
+upstream
nt +downstream
nt
atgactgctgagactcttaacttcggcccagaatggctccgtgcactgtccagtgggggg
agtgtgacgtctccccctccttcccccgccatgccaaagtacaagctggccgagtaccgc
tacggccgagaggagatgttagcactttatgtcaaagacaacaaggtcccagaggacatg
caggataaggagtttgctgctattctgcaagaagagcccatgcagccactggcactggtg
cctctcactgaggaggagcagaggaacttctccatgtctgtgaacagtgtggcagtgctg
aggctcatgggaaaaggagtgggtggtgcggccccagctggagtggtccgtggacgagga
gccacacggggtggtcgaggcagaggccgtggtgaaggtggattctaccaaagaagtatt
gaagatgccgaggtgggtttcagtcgcagtgtccgagagattcaccgaagccagagctgg
gacgaccggggtgagcgtcgatttgagaagccgctgcggcgggagngtggacgtcctggc
tttgaagaaactggagttcccgggggtccggggaggaaagagtacacaagggctgacagt
gataactggcgcaccctacgggaggagcaggaggaagacgaaggggagccgggcagtaac
tggagacttgctggatcccgtagggatgatggtggtcctcgctcagcgggctggcgggac
cacagtggtccaggagaaggtcggaggaggaagtttgatttcgacttccgggactctgac
ggtcacggtggcgggcgtcggcgggcaggcagcgatggtctagaggacgatagggatggc
ctgcccgagtggtgtacagatgaggaggatggggagatgggcacttttgactcgtctgga
gcgttcatgcctatgaagaagagtggcaaggagacaatcctggaggagtttgagtttaag
gggattgaggaggaggaagaggagggagacagccttgctgatatggagaggaacagcgct
gaaggagacaaagacaaggagattaaagaagccatctctgttgttggagatggtgagaca
aagccagcatctccttcgtcttctccaacagctcactgtccccctccatcgctggagtcc
caacccagcagtgcttgtcaagtggtggatagtgctcagctgagcaacagccagtctgtg
aaggccagcagcacgcctggtgaagatgcagctccattagggggctccaaggcccagctg
agtcccagcgccgcagccacctcttccagcctgcctcctccacccccctcgtctgctgct
cctctcctcccgccatctggaggagacgctgaggacgacgaaggcatgaaacacctgcag
caggaggcagagaagatggtggcatcactgcaggatacttctttggaggaggagtgcttc
acccaggctctgcagcagcaggagagcaggaacacggcagctgctctgccgctaagtcac
gaggctgccatgaagtggttctataaggacccccagggagagatccagggtccattcacc
acggtggagatgtgtgagtggtttcaggctggctacttcaccatgaccctgctggtgaag
cggggctgtgatgaaggtttccaacccctgggggatgtcatcaagatgtggggccgcgtg
ccctttgccccgggtccctccccgccgcccctgctggtgagacagctaccaccaacgcag
cgcccgcagcccaaccgggggcccgccgggactggaaacctggaccaggagcgcctgaaa
aagcaacaggagctcgcagcagcagctctttatcaacagctccaacagcagcagcagcta
ttccagctcatgaacaggtgcagtgagcagagtatgatgccttcgatgaacagatcgatg
tcagtgccagatacagggtccatgtgggacatgcatacctcagcttcacagccgtcaggt
ggtgaagccagtctttgggacataacaatgaatccttctactcagggtccaactctcgaa
cagcttcagaagctccagcaggagaggcgagacgctgaactcagggcgaagcgtgaggaa
gaggagcagcgtaagcgaagggaggagaagagaaggcaacaggaggagcagaaaaggagg
gaggaggaggagatcttcagacgcaagcagtgtcgtcagcagcaggaactgatcatgaaa
ttgctgcagcagaccccccagcagcaaggaccgggggcaggcagctcaagttggagtggg
gcttcctcctctgggctttctaaggcaggaaagccccaggctctggctttgctggaaata
cagcaggagactgagagactcctgaagcagcagcagagagcccagcagcagagagaccgc
cattctggtttgtcgatggggagctcctccatgggagggcagtgggtggatggcgtcggc
atgtggggagggccgggtagtctggagagtaagagcagtagtggagggtcttcgggcagc
atgggcatgtgggacgaggctgtgaagaaccagaccggcctgcgtgggaacagcaacaac
aacatgggccttaagaacagtcgcagcagcccatcactcagtgatcagtacatgatccgt
cgtaagcgcaccgaggaggaggagaagctgctgaagctgctgcagggcatgaagcctcag
gacggcttcaccacctggtgtgaacagatgctgcacgctctcaacacctctgccaacaac
tcctcctcctctgtggatgttgccacaattgtggcatacctgaaggaggtggagtctccc
tatgcagtgctggatttcatccggtcctacctaggggacacagtggaagccaaagagttc
gccaaacagtttctggagcgacgtgccaaacagaaagccaaccaacagagacagcagcaa
cagttatcaaaggaagtggctggattgaacatgaacttccctctgcaggattcaatgcga
ggtatgaatcccaacactctgcagtccatgtttcaggccaaccacatgggcaaggctggt
ctctatgataaccagggaggaaagatgaagaagaaacagcccatgatgctgcactctgac
cccagcatcttagggtactcattccacaacacgggcgagtgtatgagcctgaatgagatg
gagatggtggaggattactga
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integrated database retrieval system
