KEGG   Oreochromis niloticus (Nile tilapia): 100711188
Entry
100711188         CDS       T06104                                 
Symbol
hltf
Name
(RefSeq) helicase-like transcription factor isoform X1
  KO
K15711  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A3 [EC:5.6.2. 2.3.2.27]
Organism
onl  Oreochromis niloticus (Nile tilapia)
Brite
KEGG Orthology (KO) [BR:onl00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:onl04121]
    100711188 (hltf)
   03400 DNA repair and recombination proteins [BR:onl03400]
    100711188 (hltf)
Enzymes [BR:onl01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     100711188 (hltf)
Ubiquitin system [BR:onl04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    100711188 (hltf)
DNA repair and recombination proteins [BR:onl03400]
 Eukaryotic type
  TLS (translesion DNA synthesis) factors
   Rad6 epistasis group
    100711188 (hltf)
SSDB
Motif
Pfam: SNF2-rel_dom HIRAN Helicase_C zf-C3HC4_3 zf-C3HC4 zf-C3HC4_2 DEAD zf-RING_2 zf-RING_UBOX RING_XB3-XBAT31 ResIII zf-RING_5 zf-C3HC4_4 HDA2-3 Prok-RING_4 zf-ANAPC11 DUF5817 zf-rbx1 zf-RING_6 zf-Nse AAA_34 zf-RING_4
Other DBs
NCBI-GeneID: 100711188
NCBI-ProteinID: XP_005477379
Ensembl: ENSONIG00000000740
UniProt: I3IWE3
LinkDB
Position
LG19:complement(20216778..20231495)
AA seq 968 aa
MQFNRRWKFGWGRFSEVDLFTDRHESNAETLSQAIRAAASEEPDADGSVLFGQLKGTVVG
LRYYSGVVNQGEMVGLVRQPQNPYDRNAVMVANIYGNQVGHIKKELAAAMAYIMDNNLAK
VEGVVYSGTKNTYTMPVMLSFWGKEESKNSVLEHMSRRGYKLNTEGGKLKGDNQQWYSRQ
DARAYSSKKGVTTALTADELKNAFDNLFEGLMESKDGEKEAAVSVATPLLLHQKQALSWM
CARENKAALPPFWEKRGELYYNTLTCFSAKELPERVRGGILADDMGLGKTLTVIALILTN
FHKGKPLPVEKCVEKVSPIKAKMTSQMALTLEGSSSSGGAGVSGTSSGSNLTQEEVICVD
EPDAVKAADKPEKSKSKEKMKATKRKPSKEGSVLFEDLDFAAALSGSTSDTGSKKKKTDK
KSSLTQSAESSIAESTDDLKARTTLIICPLSVLSNWLDQFEQHVDPNVKLNVYLYYGPER
NRSKKFLSSQDVVITTYNVLSSDFGNKSPLHGISWLRVVLDEGHIIRNPNAQMSKAVLDL
KAQRRWILSGTPIQNSVRDLWMLVAFLGLKPFDTREWWNRVIQRPVTQGDRAGLQHLQTL
VKYITLRRTKNSEVNGRPLVSLPEKKVYVEQVELSQPEREEYELARTEGKNTIGRYVAEG
TVLRNYADVLAILMRLRQHCCHPDLLAKISSDLGAAATPAELRERLIEKLRLVLASGSDE
ECSVCLDSVRLPVITHCAHVYCRPCIAQVISTSGQEVARCPLCRSEIKTSELVEFPQEEM
EEENSTKSERWRTSSKVQALMGNLLRLRSKDSSIKCLVVSQFTRFLTILETPLREHGFSF
VRLDGTMTQKKRTQVIQEFQSSAADSPTIMLLSLKAGGVGLNLTAASHVFLMDPAWNPAT
EEQCIDRCHRLGQKRKVVVTKFIVKDSVEENMVKIQRKKQDLMEKAFGSTNTDRKTSRID
DIVALMEL
NT seq 2907 nt   +upstreamnt  +downstreamnt
atgcagttcaaccgcaggtggaagtttggttggggcaggttcagtgaggtggacctcttc
acagatcgccatgaatccaatgcagagactctctcacaggccatcagagctgcagcgtct
gaggagcccgatgcagacggcagcgtgttgtttggccagctcaagggaaccgtggtcggc
ctcagatattactcaggggtggtgaaccaaggggagatggtcggtttagtgcggcagcct
cagaatccatatgaccgcaacgcagtgatggttgccaacatttatggaaatcaagtcgga
cacatcaagaaggagctggcagcagcaatggcttacatcatggacaacaacttagctaaa
gtagaaggggtggtatactcggggacgaaaaacacctacaccatgccggtgatgctgtcc
ttctggggaaaagaagagagtaaaaattctgtactggaacatatgtcacgccgaggatat
aagctgaacaccgagggaggcaaactgaaaggcgacaatcaacaatggtatagtagacaa
gatgctcgcgcatattcatcaaaaaaaggtgtgaccactgcactaactgctgatgagcta
aaaaatgcatttgataaccttttcgaagggttgatggagagtaaggatggagagaaagaa
gctgctgtgtctgtggctactcccctcctgctccatcagaagcaggcgctgtcctggatg
tgcgctcgcgaaaacaaagctgccctgccgccgttctgggagaagagaggcgagctctac
tacaacaccctcacgtgtttctctgccaaagagctaccagagagggttcgtggaggcata
ctggcagatgacatggggctgggtaaaactctgactgtaattgcactgattctcaccaac
tttcacaaaggaaagccgctccctgtggagaaatgtgttgagaaggtttcacccattaaa
gctaaaatgacatcacaaatggccctgacactggaaggaagcagcagttcaggtggagct
ggagtgagtggcacatcaagtggttctaaccttacccaggaggaggtgatctgtgttgat
gaaccggatgcagtgaaggcagcagataagccagagaaaagtaagagcaaagagaagatg
aaagcaaccaagagaaaaccaagcaaagagggatcggtgttgttcgaggatctggacttt
gctgcagctctgagtggctcaacatctgacacaggctcaaagaagaagaaaacagacaag
aagtccagtctcactcagagtgctgaatcctccatcgctgaaagcacagatgacttaaaa
gcaagaacaactctgatcatctgccccctctctgtgctcagtaactggctggaccagttt
gagcagcatgtggaccctaatgtgaagctgaatgtgtatttgtattacggtccagagagg
aacaggagtaaaaagtttctgtcctctcaggatgtggtgatcaccacgtacaatgtcctc
tcttctgattttgggaataagagtcccctccatgggatcagctggctgagggttgtgcta
gacgagggacacatcataagaaacccaaatgcacaaatgagtaaagctgtacttgacttg
aaagctcagagacgctggattctttcaggtactcccatccagaacagtgtgagggatctg
tggatgctggtggccttcctgggtctgaagccctttgatacaagagagtggtggaacaga
gtgatccagagacccgttacgcaaggagacagggccggcctgcaacaccttcagacacta
gtgaagtacatcaccctgagacggaccaagaacagtgaggtgaacgggcggcctctggtg
tcactgcctgagaagaaagtctacgtggagcaggtagagctcagccaaccagagagggag
gagtacgagctggcacgcactgaaggaaaaaacaccattggcagatatgtagctgaaggg
acagtcttgaggaattatgctgatgtgcttgccattctcatgaggctccgacagcactgc
tgccaccctgacctgctggcaaagatttcctcagatttaggtgctgcagcaacaccggca
gagctgcgggagcgtctcatagaaaagctgcggttggtgctggccagcggctctgatgag
gagtgctccgtgtgtctggactcggtccgtctgcccgtcattacacactgtgcccacgta
tactgccggccatgcatcgcacaggtcatcagcacttcaggacaggaggtggcacgctgt
cctctgtgtcgaagtgaaatcaagaccagtgaactggtggagtttccacaagaagaaatg
gaagaagagaatagtacaaagtctgagaggtggaggacaagctcaaaggtccaagcactc
atgggaaacctgctcaggttgcgatctaaagacagcagcataaagtgtttggtcgtctct
cagtttacacgcttcctcaccatcctggagactccactcagagagcatggcttcagtttt
gtgcgtttggacggcaccatgacccagaagaaaaggactcaagtcatccaggagtttcag
agctcagcggccgacagccctaccatcatgctcctgtcactcaaagccggaggagtgggg
cttaacttgactgctgcctctcacgtttttctcatggaccccgcatggaacccagctact
gaagagcagtgcattgaccgctgccaccgtttgggccagaagaggaaagttgtagtcact
aagttcattgtgaaggattcagtggaggagaatatggtgaagatccagaggaagaaacag
gacctgatggagaaggcattcggatccacaaacactgacaggaagacatctcgcatcgat
gacatcgtagctctgatggagctgtag

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