Oreochromis niloticus (Nile tilapia): 100711462
Help
Entry
100711462 CDS
T06104
Symbol
pkd1l1
Name
(RefSeq) polycystic kidney disease protein 1-like 1
KO
K04987
polycystin 1L1
Organism
onl
Oreochromis niloticus (Nile tilapia)
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
onl03037
]
100711462 (pkd1l1)
04040 Ion channels [BR:
onl04040
]
100711462 (pkd1l1)
Cilium and associated proteins [BR:
onl03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
100711462 (pkd1l1)
Ion channels [BR:
onl04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
100711462 (pkd1l1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
REJ
PKD
Polycystin_dom
PKD_4
PLAT
PKD_channel
WSC
GPS
MJ1674_2nd
Motif
Other DBs
NCBI-GeneID:
100711462
NCBI-ProteinID:
XP_025766125
LinkDB
All DBs
Position
LG9:complement(21625986..21649207)
Genome browser
AA seq
2938 aa
AA seq
DB search
MVTRLKLSNNNNSVSCTATKGRDFFFLLDSRSLKRSPSSLTWSVFDPLFAYSYSLFTPPT
HLVCTVAGLGAPAPLSYSLLLSHLKRPPQSQFIPSFALFKARVRADMLRAFVFFALHSLS
ALASSSGQQSSPWFIGCVGASSSLGFHGPTGAGARDLDPVACSAHCLDEGYGVAALSSQT
CYCGNQLSGLVFIECFKTSSSEGTKDVKGGSERQSALNLPLGKAQDGSMALYRTEGPFLH
NISVFTSPARLEAGKTFVIEVKGNLAGRPNQPSGILGLSSQALFYVTVESLGMTLKVNVT
DDGSFTVSSDWILNVAGKYEINITVPNPLSTLSSTLYLYILPPSPGNLTVSLLHGSLDLP
SCIPTVHLDSDGVTDGVAAYRADPVSLQAFVSDGLAAEFCWRFTHREEETASLSQPPCLN
SMMKWTFESEGVHAVSVNASCIHGWKQKTIHVVVLSPGCSHLKGILCGNHLTTAVRIFAA
RQAYPTNTDIIFQAVTDVPDPVEFVWHFGDYTSATTTSRTITRKYLKPGRYNVSVTMSHG
KMAVTSDMFPVVVQRTVKLNKLVHRASVLQNHTVVFSCQVNVGTDVNFLWSFGDGTSRSG
QSTERHIFHRMGEFRVEVTASNLVSSASLSSHIFVVDQPCQPPPVKNMGPLKLQVQRYEV
VHLGVTYETEVDCDVSRGLRYSWTLFDSAGRAVPLRLTDTHRQTLIVQSHLLQYDTYTAT
ARVQVVGSVVYSNYSVKVQVMPSPPVAFIQGGTNIFLNNRNTIVTLDGQASYDPDFPTNP
LSYSWACKPVSTITSSCFNQHIPTSSPVLKFPASFLKTNFDQFQFTLTVQSRESSASSET
FLTVTSNLIGKLSIYCPECRGDRVNWDQSFSVSAVCEDCHIPAQHIQYTWSLYLVNASSK
PFTEVPFCYTVDLSTMSAIMESPATSTLHPPVTNVSQNTHTNPYLSSSPVTVATFETRDG
DVDLADSLSESSPRVLNNDGVLYSDYLIQGDSSEIPVEPDSSADWDFSFPLLESGNAGGR
LNPDYGAPFPNAEEGDPGMSAGRPRGEDGESLSAGDVSMFDMGLHEDEGSNLVDSKPFVA
IQAPTLLDLPRNPLNRGLFESFTYTGISRSFLKIKPFSLRPGSRYMLEVTAKSQSRRLGR
TQLFLKTNPVPEGLACQVQPVRGLELHTHFSIFCTSGREDLLYEYSFSVGDRLPRTLYQG
RDFQYYFSLPSGDPRDDYKVTIYTEIRSSTYGSATKPCPVTVQVQPSFLRDTSSSSSHHD
PDLELSESGLRNLSAVVQLGNSVEIRNYISLLTSILNRLSLETEANTHAQRHMRTVLIRT
LCELESSDQESMTDNICILNDLLRVTSQVTVASAKRVTAHIQMISEQFSTSSAPRRYLIN
QKVLNTALTLLSHSLRVVTTCTFTPDITQEDSTADENLRNDENTPNSTAVNSSTGGHIKQ
GSSTPAKQAVTLVADILQAAPELMLKYILFHETKEHRVSSSLINLYAASQNNKSTVINSG
SVRVHMPASFIQILFLQHGPCVLTVLTELAHSPYTWANPTQLSGPVVDLSLYKCNTRRRI
HISSLIQPINTELRHTQRNKSSSWEFTLLRSRVNYHSFNINQEHLLQSIQLTLVFRPTTK
KAFPLMVLFRMFEKPTPRMHHLHKIYRWESNTSRITLPSSYLNAAGVGHLALLNADFGKA
PRANHLTEEISYSLTVDSSLCLSWDGQQGAWTHQGCRTQLADTDSTVRCSCHRLRLLTVK
QQQIQSIHSTADVDLFLSASTDLTVLGMLLLFVCLYVTGLVACKRADVVATQSQRVHYLS
DNSASDPYLYAVTTHTGLSSAARMSAKVYISLYGEDGFSQTKELQVPGCTLFRRNSKDTF
ILSAAESLGPVWAVHIWHDNSGPSPDWYLTQVEVSEVLRGHVVGCSWLFAAQCWLAASKG
DGRVERMLRVCTQGINFAQMLRLKLYDYLADFHTWVSVYSCPSPSSFTHTQRLSVCLLLL
LGYACVGAVIAAQTDDQLLFVLGFVDVSAGAVTNGLVSVVAVLPVATAVSFLFRLRAVQP
TGSRVQRAKGRKTEKEYSEDALSLSDSTFDRRLSWSGLQQWDESWMQKYQDADLSVSYSN
ADEAPHKKQSEFLPDSSTFHETQRACLSRAKDEGQKEKDRQGRCSPDSSSERRSYYDDID
KLRERPTCQWCVYLAWTLCLLLSLSCLVLSALLGMRFNSGKVLLWVHSLFISLMSCIFII
QPALILAVAMAVSCWHRKTSEFHTFFKTREFNIEALKLWSHRGINGAEEQLTESAFPHKR
RSHLKKLLGARRRARYLGLVRPPTLAELRKTHRRKRREALIHKTLRDLSLSVAMLSLMMC
ITYDSSFRDHYQLNRAVRRHFVRNHDNSFMSIQKHVDWWNWSQTALIESLYEHTSPKTEQ
PHIVIGEPILQKIEISDTSPAEVPIMTSTTLCGRLSCYSGPSATVGLGHTKSDSASKLKL
LRSAGWLDGRTVGLKVQFTLYSPAPNLFTSMTLLAEQSPTGVLLPSVEVHSVRVHHTPTA
WDYAVIVCKLLFLFLSLIQISCQVSSMGQQGLIGYWTTPCSWVEVGVPTAALVHYVCHIY
HSTVIMSVAELLERNNDVDVRLLASWEQFLRTLRGIMLFLLTIKCVAVLRVNRTFATSAT
LLARLLSSLLWPMISGVILLIASSCLGHLLHIQSSWAVSPFHVLLRTLPCILYRGLGATS
NNRGLLQSDCDVFTCGFLYLSAVVWTAVVIGVMSSLVRSARRSHSRRNLITIAELANYIR
LSVSELTAGQHEEARNDNHTEGRAYYLKECESLVDELLFRLNALSDSLHHKAHRYREDSP
VISPTPEPSNMDSQGSARSQIIVNGTHSDDQCLLNLGGTPTVSQMFRSQANKDILQQRGQ
TGCNPSSNFVVASDDGLKSKNCPESAGKSQIAYTGSPQDVVVNVLVHEEPRRAVPDKH
NT seq
8817 nt
NT seq
+upstream
nt +downstream
nt
atggtaacacgccttaaacttagtaataacaacaatagtgtttcctgcacagcaacaaaa
ggccgtgattttttttttctgttagattcccgatcattaaagcgatctccctcctccctc
acgtggtcggtctttgacccattatttgcatacagttactctctgttcacacctcccaca
caccttgtatgcacagttgcaggtctcggtgcacctgctcctctctcctattctctcctt
ctctcacacttgaagcgtcctcctcaatcgcagttcatcccgagcttcgctctattcaag
gcccgtgtccgagcagacatgctccgcgcttttgtcttctttgcattgcactccttgtcc
gcgctggcctcctcatcaggtcagcagagttcgccctggttcatcggatgcgtcggcgcc
agctcttccctcggatttcacggacccacgggtgccggtgcccgtgaccttgacccggta
gcctgctctgcacactgcttggatgaggggtatggggttgctgcattgtcttcacagacc
tgttactgtgggaaccagctcagtggtttggtgtttatagagtgtttcaagacatcttcc
agtgaagggacaaaggacgtgaaaggaggaagtgaaagacaaagtgccttgaacttacct
cttggaaaagcacaagatggaagcatggcactctacagaactgaagggccatttttgcac
aacattagtgtatttacttctccagcgagactggaggctgggaagacttttgtcattgaa
gtgaaaggaaacctcgctggacgtcccaatcagccgtcaggcattctgggtcttagcagc
caggccctgttctatgtcactgtggagtctctggggatgaccctaaaggtcaacgtgacg
gatgatggctcctttactgtgtcatctgattggattttgaatgtagcaggcaaatacgaa
ataaacatcactgttcccaaccctctctccacactctcctccaccctctacttgtacatc
ttgccgccctctccaggaaacctaacggtgtctttgctccacggctctctggatctcccc
tcctgcatccccacggttcacttggactctgacggtgtgactgacggtgtggctgcatat
cgggccgatcccgtctctctgcaggcgtttgtgagtgacggattagcagctgagttctgc
tggcgctttactcacagggaagaagaaacggcttccctttcacagccaccctgtctgaac
agcatgatgaagtggaccttcgaatcagagggagttcacgcagtgtcagtgaatgcatca
tgcatccatgggtggaagcagaagacaatacatgttgtggtcttatctcccggctgctct
caccttaaagggatcttgtgtgggaatcatttaactacagctgtgaggatttttgcagca
aggcaagcatatccaacaaatacagatataatcttccaagctgtgactgacgtaccagat
ccagtggagttcgtctggcactttggagactacacatcagccacaactacctctaggacc
atcactagaaaatacctaaagcctggcaggtataatgtgtctgtaaccatgtcacatggt
aagatggccgttacctccgacatgttcccggtggtagtccagagaacagtgaagctcaac
aagctggtccaccgggcctcagttttgcagaatcatacagtggtgttcagttgccaggta
aatgtggggactgacgtcaatttcctgtggagctttggggatggaacaagtcggtctgga
cagagcacagaacggcacatcttccacagaatgggagagttcagagtcgaagtgacggca
tctaacctggtcagctctgcttccctgagcagccacatctttgttgtggaccagccttgt
cagcctccacctgtcaaaaacatggggcctcttaaactgcaggtacaaagatatgaggtt
gtccatctgggtgtgacgtacgagacggaagtggattgtgatgtatcaagaggcctgcgc
tactcctggactttatttgactctgcaggccgggcagtgccgctgcgtctcacagacaca
cacaggcagaccctcatagtgcagagccatctcctgcagtacgacacttatacggctaca
gccagggttcaggttgtcggcagtgtggtgtacagtaactacagcgtaaaggttcaggtg
atgccaagccctcctgtggctttcatccagggtggcaccaacatcttccttaacaacagg
aacaccatagtaaccctggatggacaggcatcttacgaccctgacttccccacgaaccca
ctcagctacagttgggcatgtaaaccagtgagcaccatcaccagctcctgcttcaaccag
cacattcccacttcgtcaccggtgctcaaatttcccgccagcttcttaaaaaccaacttt
gaccagttccagttcacgctcactgtgcaaagcagagagagttcagcttcatcagagacc
ttcctcactgtaacatcaaacctcatcgggaagctgtccatttactgccctgagtgtcgg
ggagaccgtgtgaactgggatcagtctttctctgtcagtgccgtgtgtgaagactgccac
attcctgcacagcacatccagtacacctggagtctgtacctggtcaatgcttcatccaag
cctttcacagaagtcccgttttgctacacagtagatctcagcaccatgtctgccatcatg
gaaagtcctgccacctctactctacaccctcctgttacaaatgtgtcacagaacacccat
acgaacccttatttgtcttcttcacccgttaccgtggctacctttgaaaccagagatggt
gatgtggacctggctgatagtttgtcagagtctagtccacgtgttctcaacaacgatggt
gtcctatattccgactacttgatccaaggggacagcagtgaaatcccggtggagcctgac
tcctctgccgactgggacttttcttttcctcttctggagagtggcaatgcgggtggtcga
ctaaatccagattatggtgctccctttccaaacgcagaggaaggagacccagggatgtca
gcaggaagacccagaggtgaagatggtgagagcctcagcgcaggagacgtctcgatgttt
gatatgggattacacgaagatgaagggagtaatctagtggattctaagccttttgtggca
attcaggcaccgactttgctcgacttacctcgaaaccctctgaacagaggcctctttgag
tcctttacttacacaggaatctcccgttcttttctcaagatcaagcccttcagtctgagg
cccgggagcagatacatgttggaggtcactgccaaatctcagagcaggcgtctgggccgg
actcagctgttcttaaagaccaatcctgttccggagggcttggcgtgccaagtgcagcct
gtcagaggactcgagttacacacacacttcagcatcttctgcacctcagggagggaggac
ttactgtatgagtacagcttcagtgtaggagaccgactccccaggacactgtaccagggg
agagacttccaatactacttcagccttccttcaggtgaccccagggatgactataaagta
actatatacacagaaataagaagcagcacgtatgggtcagccaccaaaccctgtcctgtc
acagtacaagtccaaccaagcttcctcagagacacctcatcttcctcttcccatcatgat
cctgatcttgagctgtcggagtcaggtctgaggaacctgtcggctgtggtgcagcttggg
aacagtgtggagattcgtaactacatcagcctcctcaccagcatcctgaacagactcagc
ctggaaacggaggccaacacacatgcacagaggcacatgcgcactgtgctcattcgcacc
ttgtgtgagcttgagagcagcgatcaggaatcaatgacagacaatatttgcattctgaac
gacctgctacgagttacaagtcaggtgacagtagcgagcgccaaacgagtaacagctcac
attcagatgatctcagagcagttttctacgtctagcgctcctcgtcgctaccttataaac
cagaaggtgctcaatacagcgctcaccctgctttcacacagccttcgagtggtgactact
tgcaccttcacgcctgacattacacaagaagactcaactgctgatgaaaacctaagaaat
gatgaaaacactccaaacagcactgcagtgaattcatccaccggtggccacatcaaacaa
ggaagttcaactccagcaaagcaagcggtgacgctcgtagctgatattctgcaggctgca
ccagagctcatgctgaagtacattttgtttcatgagaccaaggagcacagagtcagcagc
agcctcattaatttgtatgctgcatcccaaaacaacaaatccacagtcataaacagtggc
tcagtcagggtccacatgcctgcttctttcatccagattctgtttctccagcatggaccg
tgtgtcctcactgtgctcactgagcttgctcacagtccttatacctgggccaatcctaca
cagttaagtggaccagtggttgacctgagtttgtacaagtgcaacacaaggagaaggatc
cacatttcctctctcattcaaccaatcaacaccgagcttcgtcacacacaaagaaacaaa
agctcttcatgggagttcaccctcctgcgcagccgggtcaactaccacagcttcaacatt
aaccaggaacacttgctgcagtccatccagctcactctagtcttcaggcccacgaccaaa
aaggcgtttcccctcatggtgctcttcaggatgtttgaaaagccgactcctagaatgcac
catctgcacaagatttacagatgggagagcaacacctcacgcatcactctgccctcatcc
tacctcaatgctgcaggtgttggtcacttggcactgcttaatgctgattttggtaaagca
cccagagccaatcacctgactgaagagataagctacagtctgacagtggacagcagtctg
tgtttgtcctgggacggccagcagggggcctggacacatcagggctgcaggacacagcta
gcagacacagattcaactgtcagatgcagctgccatcggttgagactgctgaccgtgaag
cagcagcagatccagagcatccacagcacagcagatgtggacctgttcctaagcgcatcc
actgatctgacagtgctgggcatgctgttgctgttcgtgtgcctgtacgtcacggggttg
gtggcgtgtaaaagagctgatgttgtcgccacgcaaagtcaaagggttcactacctgtct
gacaactctgcgtccgatccgtatctctacgcagttacaacccacacgggtctcagctct
gcagcccgtatgagtgcaaaggtgtacatatcactgtatggtgaagatgggttctcacag
acaaaagaattacaagtcccaggatgcactctgttcaggagaaactctaaagacaccttc
atacttagtgcagcagaaagcctgggcccagtgtgggcggttcatatctggcatgacaac
tctggaccttcccctgattggtaccttacacaggtggaagtatctgaggtgctcagaggg
cacgtggtgggatgctcttggctgtttgctgcccagtgctggctggctgcgagcaaaggc
gatggccgagtggagaggatgctgcgtgtttgcactcaggggataaactttgctcagatg
ctgcgtctcaagctttatgactacttggctgatttccatacgtgggtatccgtgtacagc
tgcccctctcccagctccttcacacatactcaaagactaagtgtgtgtctgctgctgctc
ttggggtacgcatgtgttggtgcagtaatcgctgcacaaacggatgatcagctgctgttt
gtgttgggttttgtcgatgtgtccgctggtgctgtaacaaatgggcttgtaagcgtggtg
gctgtgctgcccgtagcaacagcggtgtctttcctgtttcgactgcgtgcggtacagccg
acggggtcacgagtccaacgtgcaaaaggcagaaagactgaaaaggaatattctgaagac
gccctctcactaagtgacagcacgtttgaccgccgcctctcctggagcggcctccagcag
tgggatgaatcctggatgcagaaataccaggacgcagacctgtcggtttcatacagtaat
gctgatgaagcaccccacaaaaagcagtctgaattccttcctgacagcagcacgtttcat
gaaacccaaagagcttgtctgtccagggcaaaagatgaaggtcagaaagagaaagatcgc
caaggacgatgttcaccagactcttcctctgagagaagaagctattatgatgacatcgac
aaactgagagaaagaccaacatgtcagtggtgtgtctatttggcctggactctatgtctg
ctgttgtccctctcctgcctggtgctctctgcactgctgggaatgagatttaacagtggc
aaggttctgctttgggtgcattctcttttcatctccctgatgtcttgcatcttcatcatt
cagccagctttgatacttgcagtggccatggcagtctcctgttggcacagaaaaacatca
gaatttcatacttttttcaaaacgagggaattcaatattgaggctttgaaactttggagc
cacagaggcattaatggagctgaagagcagcttactgagtctgcttttccccacaaacga
cgctcacaccttaaaaagctgctgggagctcgacggcgagctcggtacctgggtcttgta
cggcctccgactctggcagagctgaggaaaactcataggaggaaaagaagagaggctctt
attcataaaaccctgagggatttgtctctcagtgtcgccatgctttccctgatgatgtgt
ataacctatgacagctcattcagggaccattaccagctcaacagagctgtcagaagacac
tttgtgaggaaccatgataattcatttatgtcgatacaaaagcatgtggactggtggaac
tggtcacagacagctctgatagagtcactgtatgagcacacatcacccaaaacagagcag
ccacatattgtgattggagagccaatcctgcagaagattgaaatatctgacacttctcca
gctgaggtacccattatgacttcaacaacgctatgcggtcgccttagttgttactcagga
ccaagcgctacagttggcttaggccacacaaagtctgattctgcatcaaaactgaagctt
ctgcgttcagctggctggttggacggacggacggtgggcctgaaggttcaattcaccttg
tacagccccgcaccgaacttgttcaccagtatgacgctgctcgctgagcagagccccacc
ggtgtcctgctgccctctgtggaagtccattcagtcagagtacatcacactcctactgcc
tgggactatgctgttatagtctgcaagcttctcttcctcttcttgtctctcatacaaatc
tcatgccaagtgtccagtatgggacagcaagggctgattggatactggacaacaccttgc
agctgggtggaagtcggtgtgcccacagcggcacttgtgcactatgtgtgtcacatttat
cactccactgttatcatgagcgttgcagagctgctggagagaaacaacgatgttgacgtt
cgcctcctggcttcctgggaacaatttcttcgtactctgcgtggcattatgctcttcctt
ctcaccatcaagtgtgtggctgtgctgagggtgaacaggacctttgccacctctgctaca
ctccttgcccgcttactctcaagtcttttatggccaatgatttcaggtgtgatcctgctg
attgcatcgtcctgcttgggtcatctgctgcacattcaaagctcctgggcagtcagccct
tttcacgtcctcctgaggactctgccctgcatcctttaccggggactcggagccaccagc
aataacagaggcctcctccagtctgactgcgatgtatttacctgtggatttctgtatctg
tctgctgtggtgtggacagcagtggtgattggtgtgatgtcctcactggttagaagtgcc
agaagatctcacagcaggaggaatttgatcaccattgcagaattggcaaactacatcaga
ctgagcgtctcggagctgactgctgggcaacatgaagaagcacgaaatgataaccataca
gaggggagggcctattatctcaaggaatgcgaaagtttagtggacgaattgttgttcaga
ctcaacgccctctctgacagcctgcaccataaagcccatcgttacagggaggacagtcct
gtcatctcccccacaccagagccctccaacatggactcacagggctcagcaaggtcacag
ataattgtgaatggcacacattcagatgaccaatgtttgttaaatctgggaggaacccca
actgtgtctcaaatgttcaggtcccaggctaacaaggacatcctgcagcagaggggtcag
actggatgtaacccctcctccaactttgttgtggcatctgatgatggtttaaagagtaaa
aactgcccagagtcagcaggcaaaagtcagatcgcctatacaggttcaccacaagatgtt
gtggtgaatgttctggtccatgaagagcctaggagagcagtcccagataaacactag
DBGET
integrated database retrieval system
