Oreochromis niloticus (Nile tilapia): 100711479
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Entry
100711479 CDS
T06104
Name
(RefSeq) histone-binding protein RBBP4
KO
K10752
histone-binding protein RBBP4
Organism
onl
Oreochromis niloticus (Nile tilapia)
Pathway
onl03082
ATP-dependent chromatin remodeling
onl03083
Polycomb repressive complex
onl04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
100711479
03083 Polycomb repressive complex
100711479
09140 Cellular Processes
09143 Cell growth and death
04218 Cellular senescence
100711479
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
onl03036
]
100711479
Chromosome and associated proteins [BR:
onl03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
100711479
Histone modification proteins
HAT complexes
HATB complex
100711479
HDAC complexes
Sin3A-HDAC complex
100711479
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
100711479
PRC2.2
100711479
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
100711479
Heterochromatin formation proteins
Other heterochromatin formation proteins
100711479
Chromatin remodeling factors
NuRD complex
100711479
NuRF complex
100711479
NuRF complex (fruit fly)
100711479
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
CAF1C_H4-bd
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
Beta-prop_RIG_2nd
Beta-prop_TEP1_2nd
WDR55
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_WDR75_1st
Beta-prop_EML
EIF3I
WD40_MABP1-WDR62_2nd
WD_LRWD1
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR19_1st
WD40_RFWD3
Beta-prop_DCAF12
ANAPC4_WD40
Beta-prop_RIG_1st
WD40_MABP1-WDR62_1st
eIF2A
Beta-prop_IFT140_1st
MIOS_WD40
Beta-prop_SPT8
NBCH_WD40
Beta-prop_IFT122_1st
Beta-prop_DCAF4
Motif
Other DBs
NCBI-GeneID:
100711479
NCBI-ProteinID:
XP_003447806
Ensembl:
ENSONIG00000012228
UniProt:
A0A669CH09
LinkDB
All DBs
Position
LG19:complement(8554822..8559519)
Genome browser
AA seq
424 aa
AA seq
DB search
MADKDAAFDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKD
YSVHRLVLGTHTSDEQNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIK
INHEGEVNRARYMPQNPCIIATKTPTSDVLVFDYTKHPSKPDPSGECTPDLRLRGHQKEG
YGLSWNPNLSGCLLSASDDHTICLWDISTVPKEGKIVDAKTIFTGHTAVVEDVSWHLLHE
SLFGSVADDQKLMIWDTRSNNTSKPSHAVDAHTAEVNCLSFNPYSEFILATGSADKTVAL
WDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAE
DGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIYNDEDPEGAADS
EVQA
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atggctgataaagacgcggcttttgatgacgctgtggaggaaagggtgatcaatgaggag
tataaaatttggaagaagaacacccctttcctctatgatctggtcatgacccatgctctg
gagtggccaagcctcactgctcagtggctcccagatgtcaccagaccagagggaaaggac
tacagtgtgcacaggctggttctggggacccatacttctgatgagcagaatcacctcgta
attgccagcgttcaactgccgaatgatgatgcccagtttgatgcttcacactatgacagc
gagaaaggagagtttggaggctttggatctgttagtgggaaaatagagattgagatcaag
atcaaccatgaaggagaagtgaacagagcccgatacatgcctcagaatccttgcatcatt
gccaccaagacccccaccagtgatgtcctagtctttgattacacaaagcacccctccaag
cctgacccttctggagaatgcaccccagatctccgtctgaggggccaccagaaggagggc
tatggcctctcatggaacccaaaccttagtggctgtctcctcagtgcttctgatgaccat
actatatgcctgtgggatatcagcacagttcccaaagaggggaagattgtggatgccaag
actatcttcacaggccacactgctgtggtggaggacgtctcctggcaccttcttcacgaa
tcgctctttggatctgtggcagatgaccagaaactgatgatttgggacacgcggtccaac
aacacctccaagcctagccatgcagtggatgcccacactgctgaggtcaactgcctgtct
ttcaatccttacagcgagttcattcttgccactggctctgcagataagactgtggctctt
tgggacttgagaaacctgaagctgaagcttcactcatttgaatcccacaaggacgagatc
ttccaggttcagtggtctcctcataacgaaaccatcctggcctccagcggcaccgacagg
cggctcaacgtctgggaccttagtaagattggagaggagcagtcaccagaggatgctgag
gatggccctcctgagctgctgttcatccacggaggacacacagctaagatctcagacttc
tcttggaaccccaacgagccgtgggtcatctgttcagtatcagaggacaacatcatgcaa
gtgtggcagatggctgaaaatatctacaatgacgaggacccagaaggtgctgcagattca
gaagtccaggcatga
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integrated database retrieval system