Oreochromis niloticus (Nile tilapia): 100711543
Help
Entry
100711543 CDS
T06104
Symbol
tpm1
Name
(RefSeq) tropomyosin alpha-1 chain isoform X3
KO
K10373
tropomyosin 1
Organism
onl
Oreochromis niloticus (Nile tilapia)
Pathway
onl04260
Cardiac muscle contraction
onl04261
Adrenergic signaling in cardiomyocytes
onl04814
Motor proteins
onl04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
100711543 (tpm1)
04820 Cytoskeleton in muscle cells
100711543 (tpm1)
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
100711543 (tpm1)
04261 Adrenergic signaling in cardiomyocytes
100711543 (tpm1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
onl04812
]
100711543 (tpm1)
04147 Exosome [BR:
onl04147
]
100711543 (tpm1)
Cytoskeleton proteins [BR:
onl04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Tropomyosins
100711543 (tpm1)
Exosome [BR:
onl04147
]
Exosomal proteins
Exosomal proteins of microglial cells
100711543 (tpm1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tropomyosin
Laminin_II
CLZ
CCDC39
TMF_DNA_bd
Rod_CreS
ATG16
CENP-F_leu_zip
DUF745
PUMA_CC
Sec2p
DUF3450
HAUS1
CC_Bre1
Laminin_I
TMP_N
Lebercilin
ADIP
FKBP15
DUF1664
Motif
Other DBs
NCBI-GeneID:
100711543
NCBI-ProteinID:
XP_003440472
Ensembl:
ENSONIG00000032668
LinkDB
All DBs
Position
LG7:52745548..52756748
Genome browser
AA seq
284 aa
AA seq
DB search
MDAIKKKMQMLKLDKENALDRAEQAESDKKAAEDRSKQLEDDLVALQKKLKGTEDELDKY
SEALKDAQEKLELAEKKATDAEGEVASLNRRIQLVEEELDRAQERLATALTKLEEAEKAA
DESERGMKVIENRAMKDEEKMELQEIQLKEAKHIAEEADRKYEEVARKLVIIEGDLERTE
ERAELSEGKCSELEEELKTVTNNLKSLEAQAEKYSQKEDKYEEEIKVLTDKLKEAETRAE
FAERSVAKLEKTIDDLEEKVSQAKEENLEMHQMLDQTLMELNNL
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atggatgccattaagaagaagatgcagatgctcaagctcgacaaggagaatgccttggac
agagctgagcaggccgagtcagacaagaaagcagcagaggacagaagcaaacagcttgag
gacgatttggtagctctgcagaagaaactgaagggaactgaggatgagttggacaagtac
tctgaggctcttaaagatgcccaggagaaacttgagctggctgagaagaaagccaccgat
gctgagggagaggtcgcttcccttaacagacgtatccagctggttgaggaggagttggat
cgtgctcaggagcgtctggccactgctctgaccaagctggaggaggctgagaaggctgct
gatgagagtgagagaggcatgaaggtcattgagaacagggccatgaaggatgaggagaag
atggagctgcaggagatccagctgaaagaggccaaacacatcgctgaggaggctgaccgc
aaatatgaggaggttgcccgtaaactggtcatcattgagggtgatctggagcgtacagag
gagcgcgccgagctgtcagaaggcaaatgctctgagcttgaggaagagttgaaaactgtg
accaacaacctgaagtcactggaggcacaggctgagaagtactcacagaaggaggacaag
tatgaggaggagatcaaggtcctcactgacaagctgaaggaggctgagactcgtgctgag
ttcgctgagagatcagtagccaagcttgagaagaccattgatgacctggaagagaaagta
tcacaagctaaagaagagaacctcgaaatgcaccagatgctggaccagactctaatggaa
ctgaataatttgtga
DBGET
integrated database retrieval system
