Oreochromis niloticus (Nile tilapia): 100711604
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Entry
100711604 CDS
T06104
Symbol
lrrtm1
Name
(RefSeq) leucine-rich repeat transmembrane neuronal protein 1
KO
K16665
leucine-rich repeat transmembrane neuronal protein 1/2
Organism
onl
Oreochromis niloticus (Nile tilapia)
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99995 Signaling proteins
100711604 (lrrtm1)
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_1
LRR_5
LRR_9
LRR_14
LRR_LRWD1
LRR_NXF1-5
LRR_EndoS
LRRNT
DUF4750
HemY_N
EphA2_TM
Motif
Other DBs
NCBI-GeneID:
100711604
NCBI-ProteinID:
XP_005458792
Ensembl:
ENSONIG00000020971
UniProt:
I3KYS7
LinkDB
All DBs
Position
LG6:20474025..20478490
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AA seq
517 aa
AA seq
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MLMDFLLIGLYLKWPLKKPPGLILCSLGIFLRTVPLVEGVCPRLCRCDSKLLYCEGLNLT
DIPRNLSSAMGLSMRENNLTELREGQLAGLSQLTWLYLDHNSIDIVEEGAFDKLRRVKEL
DLSNNRIESLPNGTFRPLPNLRILDLSYNRLQALEPDLFHGLRKLTNLHLRYNALKFVPV
RIFQDCRSMQFLDLGYNQLQSLARNSFAGLFKLTELHLEHNELVKVNLAHFPRLISLRTL
YMHNNRATIVVNTLDWTWHFLEKIDLSANEIEYIEPHVFESTPNLKVLMLDSNRLTSVDQ
RILDSWSSLDSITLAGNDWECSRNVCALASWLSAFRGQHDNSLLCSSPDTAQGEDVLDAV
YAFQLCEDPPVEVTTAGLYASTRDLGPITPNPYEGEGSEVVTNSFTVTVGHDDLESTMQI
HKVVTGTMALIFSFLIIVLMLYVAWKCFPAGIRQLRQCFSSQRRKQKQKQSMQQMAAIST
PEYYVDYKPNHIEGALVIINEYGSCTCQQQASRECEV
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atgctaatggatttccttctaattggactgtacttaaagtggccactgaagaagccccct
gggttgatactgtgttcattgggcatttttctaagaacagttcccttggtagagggggtt
tgtccaaggttgtgccgctgcgacagcaagctgctgtactgcgaggggctcaacctcaca
gacattccccgcaatctgagcagtgccatgggcctgtccatgagagagaacaacttaacg
gagctgcgtgaaggccaactggctggtctgtcacagctcacctggctctatttagatcac
aacagcattgacattgtagaggaaggtgcatttgacaagctgagacgagtcaaggagtta
gacctgagcaacaaccggattgagagtctgccaaatggcacctttaggcccctcccaaac
ctccgtatcttggacctctcatacaacaggctgcaggcactagagcctgacctgttccac
ggccttagaaagctcaccaatttgcatttgcgctacaatgctctcaaatttgtgccagtg
cggatttttcaggactgcaggagcatgcagtttctggacttgggatacaaccaactgcag
agcctggcacgaaactccttcgctggcctctttaagttgactgagttgcatcttgagcac
aatgagctagttaaagtcaacctagcccacttcccacgcctcatctctttacgcactctg
tacatgcacaacaatcgtgccactattgttgtaaacacactagactggacatggcacttt
ttagagaagattgacctgtcagcaaacgaaattgagtacatcgagccacatgtttttgag
agtacaccaaacctcaaggtactgatgctagactctaatcgcttgacctctgtggaccag
cgcattctggattcgtggtcatctctggacagcattaccctggcagggaatgactgggag
tgcagccgcaatgtgtgtgccttggcctcttggctgagtgccttccgaggccagcatgac
aattccctgctgtgttcaagccctgacacagcacagggtgaggatgtgttggatgccgtc
tatgcttttcagctatgtgaggatcccccagtagaggtgaccacagcaggcctgtacgcc
tccacgagggatctgggccccattactcccaacccctatgagggcgagggtagtgaagtg
gtcacaaattctttcactgtcacagtgggccatgatgacctagagagcaccatgcagatc
cacaaggtggtaacaggcaccatggcactcatcttctcctttctcatcatagtgctcatg
ctatacgtggcatggaagtgctttccagctggaataaggcaactgaggcagtgcttcagc
agtcagcgccgtaagcagaagcaaaagcaaagcatgcagcagatggctgcaatttctaca
ccagagtactatgttgactataaacctaaccatattgagggagctttggtaatcatcaat
gaatatggctcttgcacttgccaacaacaagcttctcgggaatgtgaagtgtga
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