Entry |
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Symbol |
atrn
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Name |
(RefSeq) attractin isoform X1
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KO |
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Organism |
onl Oreochromis niloticus (Nile tilapia)
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Brite |
KEGG Orthology (KO) [BR:onl00001]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:onl04091]
100711932 (atrn)
Lectins [BR:onl04091]
C-Type lectins
Others
100711932 (atrn)
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SSDB |
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Motif |
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Other DBs |
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LinkDB |
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Position |
LG19:7593408..7724317
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AA seq |
1373 aa
MYGATRRACSGSGRDRSLLMLTTALLLSVIGLLSGLPGFTEAKECDKPCMNGQCNTATGE
CVCFPGWVGDQCQHCGGRFRLTGPSGYLTDGPGNYKYKTKCTWLIEGQPNTILRLRFNHF
ATECSWDHLYVYDGDSIYAPLLAAFSGLIVPERYGNETVPEVVSQSGYALLHFFSDAAYN
LTGFNISYRVNTCPNNCSGHGECQVGNSTSSVYCKCETYWKGEACDIPYCLADCGEPERG
SCKDKTCVCKTGWQGPDCSVSVPANSSFWSREEYTEAGLARASHKAVVEQGVMWVIGGYV
FNASDYHMVKAYNISSKTWMSLDPSVNTVTPRYGHSLALHEGKIYMYGGKIDATGNVSSQ
LWVFHIQNQTWVLLSPRAKEQYAVVGHSAHIVPPVHEGDGPVMLVLFGHCPLYGYISQVQ
EYNIAKNTWSIVSTDGALVQGGYGHSSVFDPSTRAIYIHGGYKAFSANKYGLAGDLYKFD
VGKRKWTILRDSGFFRYLHTAVMVSGMMLVFGGNTHNDTSMSHGAKCFSSDFLAYNLACD
EWTVLPRPDLYHDVNRFGHSAVFSDGVMYVFGGFNSLLLSDVLTYTSPSCSAFSSPTSCS
QAWPGIHCVWNATQEACLPWESDVIGTEQQQQPSCNTRSYGDAERCDQYTDCYSCTANTN
GCQWCSSQCVSLGSNCTSASGAIAEYEVCPKDNPSYVCNKKTSCKSCAVDQNCQWDSRNQ
ECISLPENVCGESWHLVGNSCLKFITTKDSYDNAKLTCRNHNAVLASLTTQKKVDFVLKE
LQIMSVVYKATVTPWVGLRKINVSYWCWEDMSPFTNTTLQWLPGEPSDAGFCGYLAEPAA
TGLKAQTCISPVNGSLCERPANHSAKQCRTPCAMRTTCSECTSSSSSECMWCSNMKQCVD
SNAYVASFPFGQCMEWYTMNTCPPENCSGYRTCGQCLDQPGCGWCTDPSNTGKGQCIEGS
YRGPFQTSVPAPSTLPGLPANPQPALNASMCPSESKYNWSFIHCPACQCNGHSQCVNESI
CEKCEDLTTGRHCESCISGFYGDPTNGGSCQPCKCNGHASMCNPNNGKCFCTTKGIKGDR
CHLCEVENRYQGNPLKGTCYYTLLIDYQFTFSLSQEDDRYYTAINFVATPEEPNRDLDMF
INASKNFNLNVTWATSFTAGTQAGEEIPIVSRSNIKEFKESFSNENFDFRNSPNITFFVY
VSNFTWPIKIQIAFSQHSNFMDLVQFFVTFFSCFLSLLLVAAVVWKIKQSCWASRRREQL
LREMQQMASRPFATINVALETEEEPPDLIGGNVKSVPKPIALEPCFGNKAAVLSIFVRLP
RGTGGIPPPGQSGLAVASALVDVSQQMCVGYKEKSGGLRNRKQQPTAQPSTCI |
NT seq |
4122 nt +upstreamnt +downstreamnt
atgtacggggcgacgcggcgggcctgctcgggctctggtcgggaccggagcttgctgatg
ctgaccaccgcgctccttctctcggttatcgggctgctgtccggcttgcctggcttcacc
gaggccaaggagtgcgataagccgtgtatgaacggccagtgtaacaccgccactggcgaa
tgtgtatgttttcccggctgggttggggaccaatgccagcactgcggagggcgattcaga
ctaacggggccctctggttatctgactgacggcccaggaaactacaaatacaagaccaag
tgcacctggctcattgagggacagcccaacaccattctgcgattacggttcaaccacttt
gctactgaatgcagctgggaccacctctacgtgtacgatggcgactccatctatgcgcct
ctcctggcggctttcagcggtctgattgttcctgagcgatatgggaacgagaccgtcccg
gaggtggtgtctcaatctggctacgccctgttgcacttcttcagcgatgctgcctacaac
ctgactggcttcaacatttcctaccgagtgaacacctgtcccaacaactgctctggccat
ggagagtgtcaggtggggaactccacttcttctgtgtactgcaagtgcgaaacctactgg
aagggggaagcctgtgacatcccgtactgcctggctgactgcggggaacctgaaagaggc
agttgcaaggacaagacctgcgtctgtaagactgggtggcaaggtcctgactgctccgtc
tcggttcctgccaattcctctttttggagccgagaggagtacactgaggccgggctggcc
agggcttcccacaaggctgtagttgagcagggcgtcatgtgggtcatcggaggctacgtc
tttaacgcctccgactatcacatggtcaaagcgtataacatcagcagcaagacatggatg
agcctcgacccctccgtcaacactgtcacaccacgatacggccactcgctagccctgcac
gagggtaagatctacatgtatggcggaaagatcgatgctacaggaaatgtctccagccag
ctgtgggttttccacatccagaatcagacctgggtccttttaagccccagggccaaggag
cagtacgccgtggtgggacactctgcccacattgtgcctcctgtccacgagggggacggt
cccgtcatgctagttctgttcgggcactgtcctctgtacggttacatcagccaggtgcaa
gagtacaatattgccaagaacacatggagcatcgtgtctacagatggtgccctggtccag
gggggctatggccacagcagtgtgtttgaccccagcaccagagccatctacatccacggt
ggctacaaagccttcagcgccaacaagtatggcctagcaggagacctgtacaagtttgat
gtgggcaagaggaaatggaccattctgagagacagcggcttcttccggtacctccacaca
gcagtgatggttagtgggatgatgctggtgtttggtggaaatacgcacaacgacacatcc
atgagccacggcgccaagtgcttctcatcggacttcttggcctacaatttagcatgtgat
gagtggacagtgttaccccgaccggacctgtaccacgatgtcaaccgcttcggacactct
gcagtcttcagtgatggcgttatgtacgtgttcggtggctttaacagtctactgctcagc
gatgtcctcacgtacacctcgcccagctgctcggccttttccagcccgacgtcctgcagc
caggcctggccaggaattcactgcgtgtggaacgccacccaggaggcctgcctgccttgg
gaaagcgacgttatcggcactgaacagcagcagcagccctcctgcaacacgagatcatac
ggtgatgctgagagatgtgaccagtataccgactgttacagctgcactgccaacaccaac
ggctgccagtggtgttcgagccaatgcgtgtctctcggaagtaactgcacctctgcatcg
ggggccatagccgagtatgaagtttgccccaaggacaacccgtcgtacgtgtgcaacaag
aaaacaagctgcaagagctgtgctgtggaccaaaactgtcagtgggattctcgcaaccaa
gagtgcatctcgctgccagagaacgtgtgtggtgaaagctggcacctggtgggcaactct
tgtctgaaattcatcacgaccaaggactcgtatgataacgccaagctgacctgcaggaac
cacaacgccgtcctggcttctctgaccacgcaaaagaaggtggactttgtcctgaaggag
ctgcagataatgagcgtggtgtacaaggccactgtgacgccgtgggtagggctcaggaaa
atcaacgtgtcctactggtgctgggaggacatgtcgccgttcaccaacaccaccctgcaa
tggctgccgggcgagccaagcgacgccgggttttgcggctacctggccgagccggcagcc
accggactgaaagctcaaacctgcataagcccggtgaatggcagcctgtgcgaacgacca
gccaaccacagtgccaagcagtgccggacaccctgcgccatgagaaccacctgcagcgaa
tgcaccagcagcagcagctcagagtgcatgtggtgcagcaacatgaagcagtgcgtcgac
tccaacgcctatgtagcctccttcccctttggccagtgtatggagtggtacaccatgaac
acttgtccaccggagaactgttctggatacagaacgtgcgggcagtgtctggaccagccg
ggctgcggttggtgcactgaccccagtaacacgggcaaaggtcagtgcatcgagggttcc
taccgcgggcccttccagacctctgtcccggccccttccacccttcctggtctgcccgcc
aatcctcagccggccctcaacgccagcatgtgcccgagcgaatcaaagtacaactggtcc
ttcattcactgcccagcttgtcagtgtaatggtcacagccagtgtgtcaacgaaagcatc
tgtgagaagtgcgaggacctgacaaccggccgacactgcgagagctgcatctccggcttc
tacggagatccgaccaacgggggcagctgccagccctgcaagtgtaatggccacgcaagc
atgtgcaaccctaacaatggcaagtgcttctgtacaaccaagggcatcaaaggagacaga
tgccacctgtgtgaagtcgagaaccgctaccaaggcaaccccctcaaaggaacatgctat
tacacgctactcatcgactaccagttcaccttcagcctgtcgcaggaagacgaccgctac
tacacggccatcaactttgtggccacacctgaggagccaaaccgagatctagacatgttc
ataaatgcctccaagaacttcaatctgaatgtaacctgggccaccagcttcaccgcgggc
acccaggccggagaggagatccccatcgtctctcggagcaacattaaagagttcaaagaa
agcttttccaatgagaactttgatttccgaaacagccccaacattactttcttcgtctac
gtcagtaacttcacgtggcccatcaagatccaaattgccttctcccagcacagtaacttc
atggatctggtgcagttctttgtcacattcttcagctgcttcctgtccctgctcctggtg
gctgccgtagtttggaagatcaaacagagctgctgggcgtcacggcggcgagagcaactg
ctgagggagatgcagcagatggccagccggccttttgccaccatcaacgtcgccttggag
actgaggaggagccgcctgacctcataggaggaaacgtcaagtccgtcccaaaacccatt
gccctcgagccttgctttggcaacaaagccgccgtgctctccatctttgtacggttaccc
aggggcaccggcggaatccctcctcctggacagtctggtttggccgtggccagcgcgctg
gtcgatgtatctcagcagatgtgtgtggggtacaaggagaagtctgggggactgaggaac
cgtaaacagcagcccacagcgcagccatccacctgcatctga |