Oreochromis niloticus (Nile tilapia): 100711965 Help Entry 100711965         CDS       T06104                                  Name (RefSeq) aggrecan core protein isoform X1   KO K06792   aggrecan 1 Organism onl  Oreochromis niloticus (Nile tilapia) Brite KEGG Orthology (KO) [BR:onl00001]  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    00535 Proteoglycans [BR:onl00535]     100711965    00536 Glycosaminoglycan binding proteins [BR:onl00536]     100711965    04091 Lectins [BR:onl04091]     100711965 Proteoglycans [BR:onl00535]  Extracellular matrix (ECM) proteoglycans   Aggrecan / versican family    100711965 Glycosaminoglycan binding proteins [BR:onl00536]  Hyaluronan   Extracellular matrix or blood plasma proteins    100711965 Lectins [BR:onl04091]  C-Type lectins   Lecticans    100711965 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Xlink Lectin_C Sushi V-set EGF hEGF EGF_3 I-set EGF_CA Izumo-Ig Motif Other DBs NCBI-GeneID:  100711965 NCBI-ProteinID:  XP_019218487 LinkDB All DBs Position LG1:complement(1054193..1075743) Genome browser AA seq 1378 aa AA seqDB search MHCRRINMIRWTMLMALYVTVISATYDVYEQQSYMDPEDVLSVIIPLEGPQRPLLGGTLL LPCYFEDHTVDDPGAPTIAPLSHRIKWSFVTKEKVTTIIVARGGKVRITENYEDRVQLVA YPGTPTDASIRISELRSSDTGVYRCEVQHDIEDSHSIVHVQVQGIVFHYRAIMGRYSLTF EKAKAACTQNSAVMASPEQLQAAYDDGFHQCDAGWLSDHTVRYPIQSPRMNCYGDKVELP GVRTYGVRDLNETYDVYCFAEKMTGRVFYTATAEKFTFSEAALACSHKGAQLATTGQLYL AWQGGMDVCNAGWLADRSVRYPINIRRSQCGGGLIGVRTVYLHTNQTGYPLPESRCDAFC YTESTDEDGSGMTEDGSGVLRVTTVTQTPQVFFRTTTTESEAAGEVETMMPTNVDFTYTE SPTDLPLAEPPNITESVTDLIESATAQPDVGRELHKGFVIPPTGMVFHYRSAAGRYAFTF VEAQQACQSVGGSIATPQQLQAAYEAGYQQCDAGWLLDQTVRYPIVYPREGCVGDLGDRP GVRSYGLRPAHERYDVYCYTDGFKGEVFHIGSAEGFTYSEAVRSCQEQNATAASTGHLYA AWKMGFDKCRAGWLLDRSVRYPINNPHAECGAGKIGVHTVYNHPNQTGYPELDARFDAYC FRADIQLIANETGLNITEIEEALLNLTSATHLLRPAVPSISPPIDVETSGSGSGSAETSV VDYTSGGHSGESSGSGDKVTSGDGSASGDLPSSGSGDLAVSASADLPSGESGPSSTDLSG SGSGEGSTISILFSGTDSTPSGKDSGSGGPQEAGEGSTEILTFPSSDVGSGVLSGSGDVS WSGSGFSSTESGSSTEMSSGFVTSQEFSGSSSLPSTFSSGSGSGQSGELSESGDAQILLI DDKLIDATTSSKYSELSGDLVEASGVLLYSSAEGSGGYLSGFGSSSFHSLSGSGLSGYES STSGEGGSVTFLSEDVMTKVSENTSPEGSGTLFSKLGKGPLEYSGGGSSSDSGSYPGNGD SHSSAASTTFSEDPSRHLLVAYPIIECRVTESTTGPQEDPNAVPETPDDVPVILAPAVVP AGLAAPPITVAPPSVQTSGPVEGHVGACEPNPCGDASCTAENGFAFCDEVDVCRSDPCAN GATCVETVDSFKCLCLPSYGGERCEIEEQPCEDGWTKFQGNCYRHFTEREAWVTAEQCCR DHNAHLVSIISPEEQHFVNANAQDYQWIGLNDKTVENDFQWTDGTPLQYENWRPNQPDNY VNSEEDCVVMIWHSDGQWNDVPCSYHLPFTCKKGSVSCGAPPEVSNACMFGKKRVVYPVG SIIRYQCNPGFRQRHLPLVRCQPDGQWEKPQVKCTDVKSQRRAQRRSLRSPERNSRHH NT seq 4137 nt NT seq  +upstreamnt  +downstreamnt atgcactgcaggaggattaatatgatccggtggacgatgctgatggctttgtatgtgact gtcatctcagccacatatgatgtttatgagcagcagtcctatatggacccagaggatgta ctgagtgtcatcattcccctggagggtccacagcgccctctgctggggggaacgctgctg ttaccgtgctactttgaggatcacactgttgatgaccctggagctcccaccattgccccc ctgtctcatcggatcaaatggagctttgtgactaaagaaaaggtcacaaccatcattgtg gcccggggggggaaagtgcgtatcactgagaactacgaggacagagtccagctggtagct tatcctgggaccccgacagacgctagcatcaggatatccgagctgcgttccagtgacacg ggagtgtatcgctgtgaggttcagcacgatatcgaggacagccacagcatcgtgcacgtc caggttcaaggtattgtcttccactacagggccatcatgggacgctacagtttgaccttt gaaaaggcgaaggcagcgtgcacccagaatagtgcagtaatggcttcacctgaacagctc caagcagcgtacgatgacggttttcaccagtgtgacgctggctggctctctgatcacaca gtcaggtacccaatccagagtcctcgtatgaactgttacggtgacaaagtagaactgcct ggagtcaggacctacggcgtgagggatctcaatgagacttatgatgtttactgcttcgct gagaagatgacaggcagagttttctacactgcgactgcagagaagttcaccttctctgag gctgcgttggcgtgctctcataagggtgctcagctggccactacaggtcagctgtacctg gcctggcaaggagggatggatgtctgcaacgctggctggctcgcagacaggagtgtccgc tatcccatcaacattcgtaggtcacagtgtggaggcgggctgatcggggtacggactgtt tatcttcacacaaaccagacaggatatcctcttcccgagtctcgctgtgacgccttctgt tacacagagtcgactgatgaagacggttcaggcatgacagaggacggcagtggtgtgctg agagtcaccacagtgacgcagaccccacaggtgttcttcaggaccacgacgacagagagt gaggccgccggagaggtggagactatgatgcctactaacgtggacttcacctacacagaa agccccaccgacctgcctctggctgagccgccaaacatcaccgagtccgtcactgatctg atagagtcagccacagcacagccagatgttggcagggagctacacaaaggctttgtgata cctccaaccggcatggtcttccattaccgttcagctgctggccgctacgccttcactttt gtcgaggcccaacaagcctgccagagtgttggaggctcaattgccacgccgcagcagctg caggcagcgtatgaagctggataccagcagtgtgacgcaggttggctactggatcagact gtaaggtatcctatcgtttaccctcgagaaggctgtgttggagatctgggagatcgaccc ggggttcgatcctacggtctgaggccagcacacgagagatacgatgtgtattgctacact gacgggttcaaaggagaggttttccacattggatcagctgaaggtttcacttacagtgag gctgttcgtagctgtcaagagcagaacgccacagcggcctccacaggacatctctatgct gcctggaaaatgggctttgacaagtgccgtgcaggctggctactagatcgcagtgtgcgt tatcccatcaacaatccacatgcggagtgcggagcggggaaaataggagtgcacactgtg tacaatcaccccaaccagactggctatcctgaacttgatgccagatttgatgcttactgt ttcagagctgacattcagcttattgcaaatgaaactggactgaacatcacagaaattgag gaggctctactaaatctgacatcagctacccatttgttacgacctgctgttccctccata tctcctcccatcgatgtagagacttcaggctctggttcaggctcagcagaaacttctgta gtagattacacatctggaggtcactctggagaatcgtctggatctggagataaggttact tctggagatggctctgcttctggagacctcccttcctctggctctggagacctggctgtc agtgcgagtgcggacctacccagcggagaatcaggtcccagcagtacagatctttctgga tcaggtagtggagaagggtccacgatcagtattcttttttcaggcactgactccactcct tcaggcaaagactcaggttctggaggacctcaagaagctggagagggaagcacagagatc cttactttcccttcatctgatgtgggatctggagtgctgagtggtagcggggatgtgtcc tggtctggatctggcttcagttctacagaaagtggttcttccacagaaatgtcctctggt ttcgtcaccagtcaggagttttctggctctagcagtttaccatccacattttcctctgga agtggtagtggacagtcaggagagctttcagagagtggagacgctcagatcttattgata gatgataaactgattgatgcaaccacctccagtaaatacagtgagcttagtggagactta gtggaggcatctggggttttactctacagttctgcagagggaagtggtggatatctgtct ggatttggaagctcaagttttcattctctgtctggatcaggactttctggatacgagtcc tctacaagtggagaaggaggcagtgttaccttcctgtctgaggatgtaatgacaaaggta tctgaaaacacatcaccagagggctcaggcacgctgttttcgaagcttggtaaggggcct ttggagtacagtggaggaggaagtagtagtgacagtggctcttaccctgggaatggagac tctcactcatctgctgccagcacgactttttcagaagacccttcgagacatctgctagtg gcctatcccatcattgagtgccgtgtgacagagagcaccacaggaccacaggaggaccct aatgccgtgccagagacccccgatgatgtccctgtaattctggcccctgcggttgtcccg gcaggactagctgcacctcccattacagttgcaccaccctctgttcagacatcaggccct gttgaaggacatgttggcgcatgtgaaccgaacccctgtggcgatgcttcatgcactgca gagaacggctttgccttctgtgacgaggtagatgtgtgccgttccgacccttgtgccaat ggagccacctgtgtggagactgtagactctttcaaatgcttatgcctgcccagctacgga ggggagcgctgtgagatcgaggagcagccgtgtgaagacggctggactaagtttcagggg aactgctaccgacacttcaccgagagagaggcgtgggtgacagcggagcagtgctgccgc gatcacaacgcccacctggtcagcatcatctccccagaagagcagcactttgtcaacgca aatgcacaagactaccagtggatcgggctgaatgacaagaccgtagagaatgacttccag tggactgacggcactcctctgcaatacgagaactggaggccgaaccagccggacaactac gtgaactctgaagaagattgtgtggtgatgatctggcattctgacggccagtggaacgat gtaccctgtagctatcatctgcccttcacctgcaagaaaggctcagtgtcctgtggtgcc ccgccggaggtgtccaatgcttgcatgtttggcaaaaagagggtggtgtaccccgtcggc tccatcattcgttatcagtgcaatccaggatttagacagcgccatctaccgctagtgcga tgtcaaccagacggacagtgggaaaagccccaagtgaaatgcaccgatgtgaaaagtcaa aggagagcacagaggaggagcctcaggagtccagaacgcaacagccggcatcactaa

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