Oreochromis niloticus (Nile tilapia): 100711980 Help Entry 100711980         CDS       T06104                                  Symbol focad Name (RefSeq) focadhesin isoform X1   KO K27498   focadhesin Organism onl  Oreochromis niloticus (Nile tilapia) Brite KEGG Orthology (KO) [BR:onl00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:onl03019]     100711980 (focad) Messenger RNA biogenesis [BR:onl03019]  Eukaryotic type   mRNA degradation factors    3'-5' decay     Other 3'-5' decay factors      100711980 (focad) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Focadhesin DUF3730 Motif Other DBs NCBI-GeneID:  100711980 NCBI-ProteinID:  XP_019204833 Ensembl:  ENSONIG00000019846 LinkDB All DBs Position LG3:75886..110913 Genome browser AA seq 1809 aa AA seqDB search MMESLKTRLEFPSPVIQAQTVRSLVAAVLKEKGSNGQISWSCAQGPALEALWQQCCSDCA VVCSACCDTLVLLVDQGHADLEYILNGVLNLLPSARHTQGLIKVIRRLLEMQADQSDGHF TCPYSIRSSPHPYVTALENRADCWPALLFEIDDFIQKAVDRDKAAYITILAPFLRYLYCQ PHRQPEHALLRQSLLRVMLPIQGGSRSAPQNKEQETPSPVSDRLLLCLCQLVPHMQVDSV EAVLELCAFVGALLQDLTGTSGDQWKPEKAVLALQLLCACRRCLELNGDCRPIIGLIQQL VPACQELLLDELVMGVALLLLEAPSDQLTSLLRLALSLVPEQAEASPWLSPVLILPVLQL LSCLGLTEPLSDQNTHSTNHRLAHSLLHSISRPADKPQQVAQQPAPSLPLSLSSWYSELS VSLSVLRKVANNPAAATDWLLAVSSALSSSQRLSSSLVLIVTYLIIMGQENICQLALRAS QAVAAADPCQVPPLLLLLLFKLTKEKNPVLAHAVLTSLPNLGTHKLCFPIVLHSLHMLAG SPKLRAVGLRLMTALWKKQDRVYPELQRLMSQQDSRVVLGRDAQWEQILARAACVRDICR ERPYQHAGDMVAAISLTLKQCNRPDLATPAALVLQGLQELCRAEVVDIISAWRTVWPELS CHSQPGVLQAMAELLALVPQLTVKSEQYEKLKEEVVSILWNYALSEDPEVASCGYRALAN FPETDHTINHLPEAARPPAKLPENEEDEHSKEKEEDEKDLSVPGSSYVKLMTLTTSSVLP AFELFLTSLVRQEMSQMPRGIYFSALRGGNLRSDQGKTVAGIPSFMLKTYEKNKQPGLKP GLAAGLLLSYSLSVQTDRAGRPIGRFLVSRSRSYQQTLTALIHEVNIQPSEWHRALLLPQ AWRGFMSRAFYAVMEGRRAELEMLQKQGKEDPQELQYKHHCAWLWARDQLADVIKGATKD SPVVQGNAILALSGLAAVLAKYESNLPTDGDGSLGAGPEFVATGSWLTTVLDTLLSISSS SFKSRGRVFPWFLHRSYSGENTASTIARSCASLALSLLVSVLVVWQRDSLTHILSALQAG LPGSPAADDSQAIQFHSGLGLGMVLSSLLHQRLSDESAQKDADLLFGPLDALESSSFNPN LEYNTGCILGLGLVLSASCSSGQRSQHVRVSMTLDKLLANLQDCSGRGRMVQEVLAYSVA CVSVSAFSAGLIDAAKAEEVMDTLRSLTEESQQTPGFSLALGLAVHGLSVSGHGRAEHIH PHLLAAWIKILLAEGCPTMQRLAAVNGLVALVGSESYLIQLKSETELVSKQQNRLNEVIR AVTQIITFSGAIGLQSNSACLLGHLHLAHMSSSHSHTAVPPDFSYLSEKSVVRSTTEFIT EAGQTGPQSSHPGLVKTALTALASVGASFQYPPINWSAALSPLMRMSFGEDVQHQCVVLA ACQTQSSHSAALFLGSWLSPPLVHSLSYQTRAHLYETLGSWMKHVTEDKLQVYVESLGVQ QFQEDLRPQRASLCCSVLRGLAQAMALPNPSSSCWTILCSATEKIFTFLPDRIQDNEVDL YVGVAKCLSEMSDTEIERIMKVSETQMEKTCFILAYLTSQGRVPLLSLNDVIAGVLRGWP SRRVGWLLLQTFYQCRLATSINTGISRRMEWLLELMGHIRNVAYGVTDVQCGDTRSATDF LFQLFAAAVVSWSDHIMPLLFGIRVQWFPWQPDPKPHALTHGLYGEESLVEGALSQCLLA MSHSLPRLLDKEPWSSQTPKFIDWLLSIMEAPEQSVSASTVSTAKAALLGLRSSAEFKKK AVWTRAYGW NT seq 5430 nt NT seq  +upstreamnt  +downstreamnt atgatggagagtttaaagacgcggctcgagttccccagccctgtcatacaagcccagacg gtgagaagtcttgttgcagctgtcttaaaggaaaaagggtcaaatgggcaaatcagctgg tcctgtgctcagggcccagcactggaagctttgtggcagcagtgctgcagtgactgtgct gtggtgtgttcagcgtgctgcgacaccttggtgttattggtggaccagggccatgcagac ctggagtacatcctcaatggtgtcctcaacctcctgccttctgcaagacacactcaaggg ttgataaaagtcattcggcgattgttggagatgcaggctgaccagagcgatggacacttc acctgtccgtattctatcaggagcagccctcacccgtacgtcacagccctggagaacaga gcggactgctggccggctctgctgttcgagatcgatgactttatccagaaagctgttgac agagataaagcggcttatatcaccatactggcccccttccttcggtacctatactgccaa cctcacaggcaacccgagcacgcgctccttcgacagagtcttctcagggtgatgctgccc attcagggaggatccaggtccgccccccagaacaaggagcaggaaacgccgtccccagtg tctgacaggctgctgctctgtctttgtcagctggttccacacatgcaggtggacagcgtg gaggcagtcctggagctgtgtgcatttgtgggcgctctgctccaagatctaactgggacc tctggagaccagtggaaaccagagaaagcggtgctggctctgcagctgctgtgtgcatgt cggcgatgcctcgagttaaacggagactgcagaccaataatcggcttaatacagcagctg gttccagcctgtcaggagttgctgttggatgagctggtgatgggcgtggccttgctcttg ttggaagccccttcagatcagctgaccagccttctcagacttgcactgagtttggtccct gaacaagcggaggcgtcgccctggttgagtccggtcctgattctccccgtgttgcagctc ctgtcctgcttgggtctcactgagccgctgtctgaccagaacacacacagcaccaaccac aggctggctcacagcctgctgcacagcatcagcaggcccgcagataaaccccagcaggta gcccagcagccggccccatcactgcctctgtctctgagttcctggtatagtgagctcagc gtgtctttgtcggtactgcgcaaagtggccaacaatccagcagcagcgaccgattggctg ttggcggtcagctccgccctgtcgtccagccagcgcctgtcctcctctcttgtcctgatt gtgacttatctcatcatcatgggtcaggaaaacatctgccagctggctttgagagcaagc caggctgtcgccgctgccgacccctgccaggtcccgcccctcctgctgcttcttttgttc aaactgaccaaagaaaagaatcccgtcctggctcacgctgttctcacaagcctgccaaac ctcggcactcataagctttgcttcccgatcgtgctgcacagtctgcacatgctggccggc tcccccaagctgagagcagtgggactgcgcctcatgaccgctctgtggaaaaaacaggac cgggtctacccagagctgcagcgtctaatgagccagcaggacagcagggtggtgctgggg agggacgcccagtgggagcagatcctggccagggccgcctgtgtcagggacatctgcaga gagaggccttaccagcatgcaggggacatggtggctgccatttcactcactttaaaacag tgcaacagaccagacctggcaaccccggctgctctcgtcctgcagggactacaggagctg tgtcgagcagaggtggtggatattatctcagcatggagaactgtttggcctgagctcagc tgtcactcacagccaggagtgcttcaagccatggctgagcttttggctctggtgcctcag ctcacagttaaatcagagcagtatgagaaattaaaagaagaggtggtcagcattctctgg aattatgctctgagcgaggatccagaggtggccagctgtggctacagggctttggcaaac tttcctgaaacagatcacaccataaaccaccttcctgaggcagcccgaccacctgcaaag ctccctgaaaacgaagaagatgaacacagtaaagaaaaggaggaagatgagaaggatctc tccgtcccaggctcatcttatgtgaagctgatgactctcaccacctcgtctgttcttcca gcctttgagctcttcttgacgtcactggtgaggcaggagatgagtcagatgccacgggga atctacttctcagccctgagggggggtaacctccgctcagaccagggtaaaacggtggca ggaatcccgtcgttcatgctcaagacctacgagaaaaacaagcagcctgggctgaagcca ggactggcagctgggctgcttctgtcgtacagtttgtctgtgcagaccgatcgtgctggg agacccatcggccggttcctcgtcagccgcagccgcagttaccagcagacgctgacagcc ctcattcatgaagtcaacatccagccctctgagtggcaccgtgccctcctcctgccacag gcctggaggggcttcatgagccgagctttctacgccgttatggagggtcgacgtgctgaa ttagagatgctccagaaacaaggcaaagaggatccacaggagctgcagtacaagcatcac tgtgcctggctgtgggccagagatcagctggcagatgtcatcaaaggtgctacaaaggac agtcctgttgttcagggaaacgccatcttggctctgagcggcctcgctgctgtccttgct aagtatgagagcaacctgcccactgatggtgacggcagcctgggggctggaccagagttt gtggccacaggcagctggttgaccacggtgctggacaccctgctcagcatcagcagcagc agcttcaagtccagaggacgagttttcccctggtttctgcaccgctcctactcgggtgag aacacagcgagtaccatagcgcgctcctgtgcaagcctcgccctgtcgctgctcgtctca gtgctcgtggtgtggcagcgggacagtctgacccacatcctgtcagcactgcaggccggc ctcccgggctcccccgctgcagacgactcccaggccatccagttccactccgggctcggt ctcggcatggtgctgtccagcctgctgcaccagcgcctcagtgatgagtctgctcagaag gatgctgatctcctctttggccctctggatgctctggaaagttcctctttcaaccccaac ttggaatacaacactggctgtatactgggtctgggtctggtgctgtctgcctcctgcagc agtggacagaggagtcaacatgtccgtgtcagcatgacactcgacaagctactggccaac ctgcaagactgcagtggacggggacgcatggtgcaggaggtcttggcgtactctgtggcg tgtgtgagcgtttcagcgttcagcgcaggtcttattgacgccgccaaggccgaggaggtc atggacacgctgcgcagcctgactgaggagagccagcagaccccgggcttctccctggct ctggggttagcagtccacggcctgtcggtgtccggccatggcagagcagagcacatccac cctcacctgctcgcagcctggatcaaaatcttactggctgagggctgtcccaccatgcag cggctggctgctgtcaacgggctggtggctttggtggggtcagagagttacctcatccag ctgaagagtgagacggagctcgtgtccaagcagcagaacaggctgaatgaagttattcgg gccgtcacacagatcatcacgttctctggagccatcggtttgcagtccaacagcgcctgt ttgctgggacatttgcatctggcccacatgtccagcagtcacagtcacacagcagttcct ccagatttcagttacctctcagagaaaagtgtggtcagatccacgactgagttcatcaca gaagctggacaaacaggtcctcagtcctcccatccaggcctggttaagaccgctctcacc gctttggcgtcagtcggcgcctctttccagtatccgcccatcaactggagcgccgctctt tctcctttaatgaggatgagctttggagaggatgtgcagcatcagtgtgttgtactggca gcctgtcagacccagtcctcccacagtgctgctctctttttgggctcctggttgtcccct cccctggtccacagtctcagttaccagacccgggcccacctctatgagactctgggctcc tggatgaagcacgtgactgaggacaagctccaggtctatgtggagagtttgggggtgcag cagtttcaggaggacctccgaccccagcgggcgtccctgtgctgctctgtgctgcggggc ctggctcaggccatggccctcccaaacccctctagcagctgctggaccatcctctgctct gccacggagaagatcttcaccttcctgcccgaccgaatccaggataatgaagtggatctg tatgtgggcgtggccaagtgtctgtctgagatgtctgacacagagattgagaggatcatg aaagtgtctgagactcaaatggaaaagacctgcttcatcttagcctacctgacctctcag ggacgagtgcccctccttagtcttaatgatgtcattgctggggtcctccgtggttggcca agccgcagagtggggtggctcctcctgcagactttttaccagtgtcgcctggcaaccagc atcaacacaggcatctccagacggatggagtggctcctggagctaatgggacatatccga aatgttgcctacggcgtcacagacgtccagtgtggagacaccagatcggccaccgacttc ctgttccagctctttgctgctgcagtggtttcctggagtgaccacatcatgccactcctc tttggcatccgggtccagtggtttccatggcagccagaccccaagcctcatgctctaaca cacggtctgtatggcgaggagtcgttggtggagggcgccctgtcccagtgccttttagcg atgtcccacagcctccctcggctgctggacaaggagccctggagcagccaaacacccaag ttcatagactggcttctcagcatcatggaagctcctgaacagagcgtgtcagcatcaact gtcagcacagccaaagctgctctgttgggactcaggtcctctgcagagttcaagaagaaa gccgtgtggaccagagcgtacggctggtag

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