Oreochromis niloticus (Nile tilapia): 100712012
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Entry
100712012 CDS
T06104
Name
(RefSeq) neural cell adhesion molecule L1.1 isoform X1
KO
K06550
L1 cell adhesion molecule
Organism
onl
Oreochromis niloticus (Nile tilapia)
Pathway
onl04514
Cell adhesion molecule (CAM) interaction
onl04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
100712012
04517 IgSF CAM signaling
100712012
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
onl04515
]
100712012
04090 CD molecules [BR:
onl04090
]
100712012
04091 Lectins [BR:
onl04091
]
100712012
Cell adhesion molecules [BR:
onl04515
]
Immunoglobulin superfamily
L1 family
100712012
CD molecules [BR:
onl04090
]
Proteins
100712012
Lectins [BR:
onl04091
]
I-type lectins (Siglecs)
100712012
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ig_3
I-set
fn3
Ig_2
ig
Bravo_FIGEY
V-set
Pur_ac_phosph_N
FN3_DSCAM-DSCAML_C
Ig_VEGFR-1-like_5th
C2-set_2
Ig_5
Fn3_VIN3
Tissue_fac
Interfer-bind
Receptor_2B4
Fn3_Dep-1_2nd
MAP17
Motif
Other DBs
NCBI-GeneID:
100712012
NCBI-ProteinID:
XP_005477847
Ensembl:
ENSONIG00000014786
LinkDB
All DBs
Position
LG20:complement(1676130..1720616)
Genome browser
AA seq
1296 aa
AA seq
DB search
MCVSQSRWMGCRGMCSPALPLVLLLLLPLSFLSSTPPFAQGAIHIPESYTKDNIFQPPVL
TEMPKSHTVFSLEDFNLACEATGNPTPTFRWLKDGELFGSETEGSGTLRGDNSSLDMLEG
EYRCYASNSLGTAMTQAVKVNVEPQPVLMKQQVMREQGDVGQSMVLSCNPPESSPPPSIH
WMNMNLMHITRSERVTIGLDGKLYFANLMESDKKKDYICHAQYREARTILPATAVSLSVK
PSNSVAHGGKPEFFHHRNHSQISALKGNSVTLECLPKGLPTPKVEWKKKDGVLADTTGQV
INFDRWLHFDSITLDDDGEYECKASNAHGSITRSFTVTVEAAPYWVKEPQNLMYTPGETV
RLDCQADGVPRPSITWRINGQLLTEVDEEPRRTVTGGTLIMKDVNIGDTAVYQCEAKNGH
GSILLNTYLYVVELPPQILSPDGFIYNVTKGRDVALHCESFGSPRPRVTWDREDTGALLS
DPLLYPRISILTNGTLKLSDVSHNDSGEYICSVQNTNISITAKLDVFRPSEILTGPQAVR
VVQGESAFLDCDVDTDPRLRDYQVVWKKGNRKLEETSVDDKYTFLKNNTLKVTDVQLNDS
TEYSCEVITKVDNVIAQGSITVVAKPDPPSGLTLSNAEGVSVTLSWSPGLSHNSPITEFI
IQAREEYHTEERKWTWEELKKVPGDFNHVELTLHPFSTYRFRVIAINEVGRSRHSNPSDH
HSTPPAAPSINPTGVRSNSAEPGTLIITWDEIDKRFHNGQDFQYEVLWREADGSNVNWNS
GRVRSPPFIVNNTGTYTPFEIKVRSVNALGGGPDPEPEIGHSGEDKPEEAPTGVSTTVMN
STVRVSWKEAERVRGRLLGYRIYYKRLGPKAERSRRSLRQSQHEEDRGERSKQSSETDEH
SWQVEEVDHSKTSAEVTGLRLFSEYELMVTAFNSKGESPQSPPHRFHTPEGVPGPPASLE
FESPTEKSLILSWSPPAETNGVLQGYIVQYQQEVESKNSPVEILNVNDPKVKHITLDNLD
PNSHYVFKVIARTKTGQGPPITRRGATLLDGEPPKNITVTSGNTSVNLSWVPGERNRNHG
FHIQYLKKSGGGGWEKSEQVNTTQGFYTLTGLQPGAQYHLKVVHGNSTHWEGEAKTVEPL
PSEITGRFATQGWLIGLISAIVLLVLILLILCLIKRSKGGKYAVKDKESKEVDSEARPMK
DEAFGEYRSLESDGDEKRSDSQQSLEESKMGSVDSLAEYGDSVDIQFNEDGSFIGQYSGR
ASVPHGNESSGPASPVNAVPPPPVAPSMSSILNRPS
NT seq
3891 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgtgtcacagagtcggtggatgggctgtagggggatgtgctcccccgccctcccg
ctggtcctcctcctcctgctccctctgtccttcctctcctccacgcctccgtttgctcag
ggagccatccacatccccgaaagctatacaaaagacaacatatttcagcctccggtgctg
acagagatgccaaaatcacacacagtgttttctctagaagacttcaatctggcctgtgag
gccaccgggaacccgacacccacattccgttggctgaaagatggcgagttgttcggatca
gagactgaaggatccggaacgctgagaggcgacaattcttccctggatatgttagagggt
gaataccgctgctacgcctccaacagtctgggcaccgccatgacacaagccgtcaaagtc
aacgtagagcctcagccagttctcatgaaacagcaagtcatgcgtgaacaaggagacgtg
ggacagagtatggttctgtcctgcaaccctccagaaagctcgcctcctcccagcatccac
tggatgaacatgaatttgatgcacattactcggagtgagagagtgacgatcggcctggac
gggaagctgtacttcgcgaacctcatggagagtgacaagaaaaaggactacatctgccac
gcccagtacagagaggccaggactattctccctgccactgctgtctccctctctgtcaag
ccgagtaacagcgtggctcatggaggaaagcccgagttcttccatcacaggaaccactcc
caaatatcagccctcaaggggaacagcgtcaccctggaatgtttacccaaaggcctaccc
acacctaaggtggaatggaagaaaaaggatggtgtcctggcagacacaaccggccaagtt
attaactttgaccgctggctccacttcgacagcatcaccctggatgacgacggcgagtac
gaatgcaaagcctccaacgcccacggcagcatcacgcgctccttcacggtcactgtggaa
gcggctccttactgggtgaaggagcctcagaacctgatgtacactcccggggaaacagtc
cgactggactgtcaggctgacggcgtcccgaggcccagcatcacctggagaatcaacggt
cagctgttaacagaagtggatgaagaacctcggcgcacggtgaccggaggaacgctcata
atgaaagacgtgaacattggcgacacggccgtgtaccagtgtgaagccaaaaacggccac
ggctccatcctcctcaacacctacctctacgtcgtcgagctcccccctcagatcctgtcc
cctgatgggttcatctacaacgtcaccaagggccgagacgtcgcactgcactgtgagtct
tttggctcgccacgaccccgcgtcacatgggaccgggaggacacaggtgctctgctgtcg
gaccctctgctgtatcctcgtatctccattctgaccaacgggaccctcaagctgtccgat
gtcagccacaacgacagcggcgagtacatctgctccgtacaaaacaccaacatctccatc
acggccaagctggacgtcttccgtccaagtgagatactgacgggcccccaggccgttcgc
gttgtccagggagagagcgccttcctggactgtgacgtcgacaccgatcctcggctgagg
gattaccaggttgtctggaagaaagggaatcgcaaactagaagagacatcagtagatgac
aagtacaccttcctcaagaacaacacgctgaaagtgacagacgtccaattaaatgacagc
acagagtattcctgtgaggtcatcactaaagtggacaacgtgattgcacagggctccatc
actgtcgtagcaaaaccggaccctcccagcggtctgactctgtctaatgctgagggggtc
agtgtgactctcagctggagcccaggactctcccacaacagccccatcacagagttcatc
attcaggctcgggaggagtaccacacggaggagaggaagtggacgtgggaggaactgaag
aaagtgccgggcgacttcaaccacgtggagctgaccctccatccattctccacctaccga
ttccgggtcatcgccatcaacgaggttggcaggagcagacacagcaacccctcagaccac
cacagcacgccacctgctgctccctccatcaaccctacaggggtgcgcagtaactccgca
gaaccagggacactgatcatcacgtgggatgagatagacaagcgtttccataacggccag
gacttccagtacgaggtgctgtggagggaggccgacgggtcaaatgtaaactggaactcc
ggccgtgtgaggtctccaccgttcatagtgaacaacacaggaacgtacacaccgtttgag
atcaaagtccgatcggtcaacgccctcggaggaggaccggacccagagccggagatcggg
cactccggagaggacaagccagaggaagcgccgactggagtttcaaccacggtgatgaac
agcaccgtcagagtgagctggaaggaagccgagagggtccgaggtcggctgctgggatac
aggatctactataagaggctgggtcccaaggccgaacggagccggaggtctctcagacaa
tcccaacatgaggaggacagaggagaaaggtcaaaacaatcgagtgagacagacgagcac
agctggcaggtggaggaggttgaccatagcaagacctcagcggaggtgacggggctgcga
ctgttttctgagtatgagctgatggtcactgcgtttaacagcaaaggggagagtcctcag
tccccgccgcaccgcttccacacgccggagggagttcctggtcctcctgcatctctggag
tttgaaagcccgacagaaaaatccctgattctctcctggagccctccggctgagaccaac
ggcgttctgcagggatacatagtgcagtaccaacaggaggtggagagcaaaaacagtcct
gtggagatactgaatgtcaatgatcccaaagtaaagcacatcacgctggacaacctggat
cccaacagccattacgtcttcaaagtgatagcacgcacaaagactggacaaggccctccc
atcacacgcaggggagccactctgcttgatggagagcctccgaaaaacatcacagtaacc
tctggtaacacatcagtcaacctgagctgggtgcccggagagagaaaccgaaaccacggc
ttccacatccaatacctcaagaagagcggaggcggtgggtgggagaagtcagaacaggtc
aacactacgcagggtttctatacgctgacgggcctccaaccaggagctcagtaccacctg
aaggtcgtgcatggaaactccactcattgggaaggcgaggcaaagaccgtggaaccactg
ccgtcagagataactggcaggttcgccacccaaggctggctgatcggactcatcagcgcc
atcgtgctgctggttctcatactgctcatcctctgccttatcaaacgcagcaagggcggc
aaatatgcagtgaaggacaaagaaagcaaggaggtggactctgaagctcgaccaatgaaa
gatgaagcctttggagagtacagatccctggagagcgatggcgatgagaagcgctcggac
agccagcagtctctggaggaaagtaagatgggcagcgtcgactctctggctgaatacggg
gacagtgtggacatccagttcaacgaggacggctccttcatcggccagtacagcggccgg
gcatctgttccccacggcaacgagagctcgggccccgcctcccccgttaatgcagtcccg
cctccccccgtcgctccctccatgtcgagcatcctaaaccggcccagctag
DBGET
integrated database retrieval system
