Oreochromis niloticus (Nile tilapia): 100712059
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Entry
100712059 CDS
T06104
Symbol
chd9
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 9 isoform X1
KO
K14438
chromodomain-helicase-DNA-binding protein 9 [EC:5.6.2.-]
Organism
onl
Oreochromis niloticus (Nile tilapia)
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
onl03036
]
100712059 (chd9)
Chromosome and associated proteins [BR:
onl03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
100712059 (chd9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
BRK
Helicase_C
Chromo
ResIII
DEAD
HDA2-3
Motif
Other DBs
NCBI-GeneID:
100712059
NCBI-ProteinID:
XP_005447710
Ensembl:
ENSONIG00000002816
UniProt:
A0A669D4L7
LinkDB
All DBs
Position
LG1:30894291..30964308
Genome browser
AA seq
3005 aa
AA seq
DB search
MDFFNDPSLFGGGLEGLDDDGFASAPSLVDELNLTADFEPLQVEPLGPGKHQDMMPPAST
QQAMPSYSQSMGHYIDIKANVAQAFSGSQGISEGMITEQHGSYHNAPMSQVPQSNGLFCN
SGSPMWGNQDQNGNMYQALPQQQLCHQQQQLQSQQLHGRHQTQHHPCYQQEEQQHRMRQQ
QLQQQQSHQQQLLNQHQQINTQTVSLQQQHHNFPFHQGGQSSSQQQIHHTQQQVQRQLTV
REQQFHSRALPNKHYLESPNASMTATCLQTQPQQGNYQLVRECQAFPGTGLEESNLSFPM
HSSSMVHSLPTCSVSSARAYQPTQYPTYPGEPELPSLNEQSLSSASVSRPSNTTAPLSST
IPELTGTPCQFSSTAHLSQQHTRTPISQAEECPFRAIRCSGETQGNCKSSEMFGESMRSY
PNITTHLPSEQPQSCRVINTNGYQALGDSLLPSAAHDEDLDGLEPPDLLPDLLPQLEHAF
KQEDKSNCGWTDTTQEMGIEYRKPSPIEYSEDKPRKNANGPGSQIRVLSPPMKSSSSSSS
SSSSSSSSSSSSSSEKRVPRRTHHQMESTPQDKQEKANRIISEAIAKARQRGEKNIPRVM
SPESFPSSSSQYKAHRDHEHKGNGKARSKEKACRKACIVPSSKPKQKAKIGKIVIKIGKK
KRRKPESSEESDDDPPPQHTLKDDDSKRRSNRQVKRKKYAEELETRLSDDEVKVIVKTKK
TNTAASREPAVQLFVENPSEEDAAVVDKIMSSRIAKKEVSPGVVIEVEEFFVKYKNYSYL
HCEWATEQQLEKDKRIQQKIKRFKMKQAQRALFFADMEEDPFNPDYVEVDRVLEVSYCED
KDTREEVVYYLVKWCSLPYEDSTWELKDDVDQSKIEEFEQLQAAKPDSRRVERPPANLWK
KREQSRQYRNGNSLRDYQLEGVNWLLFNWYNRRNCILADEMGLGKTIQSITFLEEIHRIG
IKGPFLIIAPLSTIANWEREFRTWTHLNVIVYHGSMVSRQMLQQYEMYFRDAQGRIIRGA
YRFQAVITTFEMILGGCPELNAIEWRCVIIDEAHRLKNKNCKLLEGFKLMNLEHKVLLTG
TPLQNTVEELFSLLHFLEPARFPSENTFMQEFGDLKTEEQVQKLQGILKPMMLRRLKEDV
EKKLAPKEETIIEVELTNIQKKYYRAILEKNFSFLAKGAGQANMPNLVNTMMELRKCCNH
PYLIKGAEEKILEDFREVHSPTALDFHLQAMVQSAGKLVLIDKLLPKMKAGGHKVLIFSQ
MVRCLDILEDYLIQRRYLYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGIN
LTAADTCIIFDSDWNPQNDLQAQARCHRIGQNKAVKVYRLITRNSYEREMFDRASLKLGL
DKAVLQSMSGRDNSLGGGTGGGAVQQQLSKKEIEDLLRRGAYGAIMDEEDEGAKFCEEDI
DQILQRRTKTITIESEGRGSTFAKASFVASGNRTDISLDDPNFWDKWAKKADIDMDMVNG
RNSLVIDTPRVRKQTRPFSATKDELAELSEGESDGDETKPKLRRNYDRLNSYGRTECFRV
EKNLLVYGWGRWKDILNHGRFKKQLTEWDVESICRALLAYCLVHYRGDDKIKSFMWDLIA
PTEDGRTKELQNHLGLSAPVPRGRKGKKMKTQSSSFDIHKAEWLRKHNPEHMLQDDGYKK
HLKHHCNKVLLRVRMLYYLKQEVIGSQAQKVLDGVDSSEVKIWVPEPDNSELPTLWWDAI
SDKCLLLGVFKHGYEKYNTIRGDPTLCFLERVGKPDEKAIAAEQRNNDFMDGDVDDPEYK
PAPALLKDDMEDDASSPGDLVITDSAGDPVPVTESESAYWPSPSVLTARLRRLITASQRY
TKSRQILHIHQTQSQSSQQTMVLSAPLCPLPPTLNDTLNPKMAAKIERQQRWTRREEADF
YRVVSTFGVVFDPNLGRFDWTKFRAMARLHKKTDESLQKYLCAFTAMCRRVCRLPPKEGD
SAVDPSLNIQPITEERASRTLYRIELLRQVREQVLRHQLLYERLPLCQMSSDLPVWWEAG
THDRDLLIGAAKHGVSRTDYHILRDPELSFMAAQRNYSQTKAQQQSRTSTPLLHPQYQAT
TSALTGSPLPPPTQRDADLCGVTPKVEPISESEESKERQGASWTPTQAPATPTGLEEKPV
SVTRDNERQMVAARTKPLTPNSSERKPKKTKRSRREARHGSESDSDGSSSSSSSRSSSSS
SSSSSSSSHSGSSSSSSSSSCSSGSSSSSSSSSSSSDDSESEGEEGKKKVPTATSVKGFD
EDSVASLSTTQDETQDTHVAENGISNNSSHPFQGGGYMLAASYWPKDRVIINRLDSICQA
VLKGKWPGTRRVYEPGGAVASFYTTKLLDNANSMCEDPSASPQGSKVTKHVAENKEFSVK
LNDEGGLKLTFQKQGLPLKRPLESEEGPQAQQQYLARLHELQSASDTGLADITKPQCSFQ
TVPPGLTGQMRPNGVIDGQPVVKRRRGRRKNVEGMDLLFMNRSKVPTVPDQVPPGWGGIG
QVGMPPAPASSYSQNSSQVPADTESRVPVINLKDGTRLAGDDAPRRKELEQWLKENPGFV
ADTGAFICGVNKMQMQFHFQDGRPKQKRHRCRNPNKIDVNSLTGEERVQIINRRNARKIG
GAFAPPLKDLCRFLQENPEYGVPPEWADVVKQSGYLPESMFDRILTGPIVPEEVSRRGRR
PKNPLAKAAAAAAAAAGAPPNPAASALGLNPLLANGLLSGMDLTSLQAFQQNLQNLQSLQ
LTAGLMGLPSDASNLAASNLAAMFPMMLSGMAGLPNLLSMGSLLGKPAQEAAGGSEEKTK
GITSGGTGESSASKAPSHTSDTKGERTEGSNTTPSSTSSSASSSSATQSASAASAASSQP
LSLNPLLLSSMLYPGMLLTPGLNLPVSTTQPQSSNSDPTLPTGPPLPSVSQSSHKETEQP
EGDKDGEEEDEPLDEGEGEEEEEEEDESIEQKDNSGPEGSGKAESSSESGSSSSSSDDSD
SSDED
NT seq
9018 nt
NT seq
+upstream
nt +downstream
nt
atggacttctttaatgaccccagcctctttggtggaggtttggaagggctggatgacgat
ggcttcgcttcagcaccatcacttgtggatgagctaaatcttactgctgactttgaacca
ctccaagtggagcctcttggccctgggaagcatcaagacatgatgccaccagcttctacc
caacaagctatgcctagttacagccagtcaatgggtcattacattgacattaaggccaat
gtggctcaggcattttctggttctcagggcataagtgagggcatgattacagagcaacat
ggctcataccataatgctcccatgagtcaagttcctcaatccaatgggctcttctgtaac
agtggcagtccgatgtggggtaaccaagaccagaatgggaacatgtaccaggccttacct
caacagcagctttgtcatcaacagcaacaactacaaagccagcaacttcatggcagacat
caaacacagcaccatccctgttatcagcaagaggagcagcagcacagaatgcgacagcag
cagctgcaacaacagcaaagtcatcagcaacagctgttaaaccagcaccaacaaattaac
acacagactgtgtccctgcagcagcagcatcacaatttcccgtttcaccagggaggccag
tccagcagccaacagcaaattcaccacactcagcagcaggttcagcgccaactaactgtg
agagagcagcagttccactcaagagctcttccaaataagcattatttggaaagtccgaat
gcttctatgactgcaacttgcttgcaaacacagccacagcaaggtaactaccagttggtc
agggaatgtcaagctttccctggaacaggactggaagaatctaacctgtcctttcccatg
cattcatcatctatggttcattccctgcccacatgctctgtcagttctgccagagcttat
cagccgactcagtaccctacttatcctggggagccagaattacccagtctcaatgagcaa
tctttgtcctcagcctcggtgtctaggcccagcaacaccactgcaccactcagttctaca
atacctgaacttacagggacaccatgccagttttcatccactgcacatttgagtcagcag
cacactaggaccccaattagccaggcagaggaatgtcctttccgtgctatacgttgctcc
ggagaaacccagggaaactgcaagtcatctgagatgtttggtgaatctatgcgatcctac
cccaacattaccacccacctgccttctgagcagcctcagagttgcagggttatcaacact
aatggataccaagctttgggagacagccttttaccatcagcagctcatgatgaagacttg
gatggcctggagcctcccgacctcctgcctgacctactgccccagcttgagcatgctttt
aagcaagaggacaaatctaactgtggctggactgatactactcaggagatgggaattgag
tacaggaaaccatcacccattgagtacagtgaagacaagcctcgaaagaacgctaatggt
cccggaagccagatacgggtcctcagtcccccaatgaagagcagctcatcttcgtcatca
tcctcttcatcttcctcttcatcttcatccagctcctcatcagagaagagggttccacgg
aggacacatcatcagatggagtcaactccacaggacaagcaggagaaggccaataggata
atatcagaggctattgcaaaggctcggcaaagaggggagaaaaacatcccaagggttatg
agcccagagagcttccccagctcttcttcgcagtacaaagcccaccgtgatcatgagcac
aaaggaaatgggaaggcacggtccaaggagaaggcctgcaggaaagcttgtattgtaccc
tcgtccaagcccaagcagaaggccaagatcgggaaaattgtcatcaagattggaaagaag
aaaaggcgaaagcccgagtcttcagaggagtctgatgatgaccctccccctcaacacact
ttgaaggatgatgactctaagaggcggtctaatcgacaggtgaagagaaagaagtatgct
gaagagctggagaccaggttgtcagatgatgaagtcaaggttattgtcaaaaccaagaaa
accaatactgcagcatccagggaacccgctgttcagctatttgtagagaatcccagtgaa
gaggatgctgctgttgttgacaaaatcatgtcttctcgtattgctaagaaggaggtctct
ccaggagtggtcattgaggtggaagagttttttgtaaaatacaaaaactactcctaccta
cactgtgagtgggccacagaacagcagctggagaaggacaagaggattcagcagaagatc
aaacgcttcaagatgaaacaggcacagagggcactcttctttgcagatatggaagaggac
ccatttaaccctgactacgtagaagtagatagagtgctggaggtgtcatattgcgaggac
aaagatacaagagaggaagtggtgtactacctggtgaagtggtgctctctgccttatgaa
gacagcacctgggagctgaaggacgatgtagatcagagcaagattgaggagtttgagcag
ctgcaggcagccaagccagactcacgcagggtggagcgtcctcctgccaatctgtggaag
aagagggaacaatcgaggcaatacaggaatggcaacagcctcagggactaccagctagaa
ggagtcaactggcttcttttcaactggtacaacagacggaactgcatcctggcagatgag
atgggcctagggaaaacaatacagtccatcactttcctagaagaaatccatcgcattgga
atcaaagggccctttctcataattgccccactctccaccatcgccaattgggagcgggag
ttccgtacctggacccacctcaatgtcatcgtttaccacggaagcatggtcagcaggcag
atgctccagcagtatgagatgtatttcagggatgcacagggtcgtatcatacgtggtgcc
tacaggtttcaggctgttattaccacatttgagatgattcttggaggctgtcccgaactc
aatgccatagagtggcgctgcgttattattgatgaggcccatcgtctcaagaacaagaac
tgcaagctgctagagggattcaagctcatgaacctggaacacaaggtcctgctgacaggt
actcctctccagaatacagtggaagagctcttcagcctgcttcactttctggaaccggca
cgcttcccttctgaaaacaccttcatgcaggagtttggagaccttaagactgaagagcag
gtgcaaaagcttcagggtatcctgaagcctatgatgctgcgtcgtttgaaggaagatgtg
gagaagaagttggctccgaaagaggaaaccatcattgaagttgagctcaccaacattcag
aagaagtactaccgtgccatcctagagaagaatttttctttcctggctaaaggagctggc
caggcaaatatgcccaacctggtcaacacaatgatggagctaagaaagtgttgcaaccac
ccctacctaatcaaaggagcagaggaaaagatcctagaagacttcagggaagtgcacagc
cctactgccctagactttcacctgcaggctatggtgcagtctgctgggaagctcgtcctc
attgacaaattgctgcctaaaatgaaggcaggagggcacaaggtgctcatcttctcccaa
atggtgcgctgtctggacatcttggaagactacctcattcagagaaggtatctgtacgag
cgtattgatggacgggttcgtggaaatctgcgacaggcggccatcgaccgcttcagtaag
cctgactcagatcgctttgttttccttctgtgcacaagagctggtgggctgggaatcaac
ctcacagcagcagacacctgcatcatcttcgactctgactggaacccacaaaacgacctg
caggcccaggctcgctgccatcgcatcggtcagaacaaggcagtgaaggtgtaccgtttg
atcaccaggaactcgtatgagcgagaaatgtttgatcgcgccagcctcaagttgggtttg
gataaagcagtgttgcagagcatgagtggccgagataacagcctgggaggaggcactggc
ggaggggctgtgcagcagcagctgtccaaaaaggagattgaagatctgttgcgacgtggg
gcctacggggcaatcatggatgaggaggatgaaggggccaaattctgcgaggaggacatt
gaccagatcctgcagcgcaggacaaagaccattaccattgagtctgaggggcgaggatcc
acttttgccaaggccagttttgtagcatctggaaaccgtacagacatctccctggatgac
cctaatttctgggacaagtgggccaaaaaggctgacattgatatggatatggtcaacggc
agaaacagcctggtcattgacactcctcgtgtcagaaagcagacaaggccctttagtgcc
accaaggatgagctagcagagctttcagagggcgagagtgacggtgatgagaccaaacct
aagctcagacgaaactacgatcgcctgaacagctatggccgcacagagtgcttcagagta
gagaagaacttgcttgtatatggatggggtcgttggaaggatatcctcaaccatggccgt
tttaagaagcagttgactgagtgggatgtggagtccatctgcagggccttgttggcctac
tgcctggtccattatcgtggagatgacaaaatcaaaagcttcatgtgggacctcatcgcc
cctactgaggatggacgcacaaaggagttgcagaatcacctaggcttgtctgccccagtt
cctcgggggagaaagggtaaaaagatgaagacccagtctagttcttttgacatccacaag
gctgagtggctcaggaagcacaaccctgagcatatgcttcaggacgatggctataagaag
cacctgaaacaccactgcaacaaggtgctgctcagggtcagaatgctctactacctgaaa
caagaggtgataggaagccaggcccagaaggtgctagatggtgtggactccagtgaagta
aagatctgggttccagagcctgacaattcagagcttccaaccctgtggtgggatgcaatc
tctgacaagtgtcttctgctgggtgtctttaagcatggttatgagaagtacaacactatt
cgtggagaccctaccctgtgtttcctagagcgtgtgggaaaaccagatgagaaggccatc
gctgctgaacagagaaacaatgatttcatggatggggatgtggatgatccagaatacaag
cctgctccagcactgttaaaggacgacatggaggacgacgcctcttctcctggagacttg
gttatcactgacagtgctggagatcctgttccagtgacagaaagtgaaagtgcctactgg
ccctccccctcagtgctgacagccaggctgagacgtctgataacagcttctcagcgctac
accaagagccgccagatcctacacatccaccagactcagtctcagtcctcccagcagact
atggtgctgtctgctccactttgcccgctaccccccacactcaacgacaccctcaacccc
aagatggctgctaagattgaacggcaacaaagatggaccagacgagaagaggctgacttt
tatcgtgttgtctccacttttggtgtcgtttttgacccaaacctcgggcggtttgattgg
accaagttcagggctatggctcggctgcacaagaagactgatgagagcctgcagaaatac
ctttgtgcttttactgccatgtgccgacgtgtgtgccgcctgccacctaaagaaggagac
tctgcagtggacccgtctctaaacatccagcccattacagaagagcgagcatctcgtacc
ctgtacagaatagagctgcttcggcaggtgagggaacaagtccttcgacatcaattactg
tacgagcgtctgccactgtgtcagatgagctctgacttacctgtttggtgggaggctggt
actcatgaccgtgacctgctaattggtgctgcaaagcatggtgtaagtcgcactgattac
cacattctgagagaccctgaactcagcttcatggctgcccaacgcaactacagccaaaca
aaagcacagcagcaatcacgtacatccacaccgctcttacaccctcagtaccaagctacc
acctcagcgttgacaggctctccactgcctccacccactcaaagagacgcagacctatgt
ggggtcacgcccaaagtggaaccaatttcagagagtgaggagagcaaggaaagacaggga
gcgagttggaccccgactcaagcaccagctactcccacaggtctggaagagaagcctgtt
tcagtaaccagggacaatgaacggcagatggtggcagcacgaacgaaacccctcacaccc
aactcctcagagaggaaaccgaagaagaccaagaggagtcgcagggaagccaggcatggc
tcagagtccgactcagatggctcctcctcaagttcgtcgtcacgctcttcttcctcttca
tcgtcatcctcatcttcctcatcacattcagggtccagctcctcctcctcttcttcatct
tgctcttctggctcttcgtcatcatcctcctcctcctcatcttcttctgatgacagtgaa
agtgagggagaggaaggaaaaaagaaggttcccactgctacaagtgtaaagggatttgat
gaggacagtgtggcatctctgagcacaacgcaggatgaaacacaagacacccatgtagct
gagaatggcatctcaaacaactcttcacacccgttccagggtggagggtacatgctggct
gcatcgtactggccaaaggatcgcgtgattattaaccgcctggatagcatttgccaggca
gtgcttaaaggcaaatggccgggaacacgtcgggtctatgagcctggaggcgctgtggcc
tccttctacaccaccaagctgctggacaacgccaacagcatgtgcgaggacccctctgct
tcaccacaggggtcaaaggtgaccaagcatgttgcagaaaacaaggagttctcagtaaaa
ctcaacgatgagggaggtctgaagttgaccttccagaaacagggtctacctctgaagagg
cccctggagtccgaggaaggtccccaggcccagcagcagtacctggctcggcttcatgag
ctccagagtgcctcagacaccggacttgctgacatcaccaaacctcagtgcagcttccag
acggttcctccaggtcttactggtcagatgaggccaaatggagtaatagatggccagcca
gtggttaaaaggaggagagggaggaggaagaacgttgagggaatggacctgctcttcatg
aataggagtaaagtcccaacagttcccgatcaggtacctccagggtgggggggtattggc
caggtgggcatgcctccagcccctgcatcaagctacagtcaaaactccagtcaggtccct
gcagacactgagagcagggtcccggttatcaacctgaaagatggcacccggctggctggg
gatgatgctcccaggaggaaagaactggagcagtggctaaaagaaaatcctggctttgtg
gcagacacaggagcttttatctgtggagtaaataagatgcaaatgcagttccacttccag
gatggtcggccaaagcagaaaaggcaccgctgtagaaaccccaacaagattgatgtcaac
agcttgacgggagaagaaagggtccagatcatcaacaggagaaacgcacgcaagattggt
ggagcctttgctcctccgctgaaggacctatgccgattccttcaggaaaacccagagtac
ggagtcccgcctgaatgggccgatgttgttaaacagtcgggttacctcccagagagcatg
tttgacaggatcctgactggacccattgttcccgaggaggtaagtcggcgtggacgacga
cctaagaatcctttggccaaggcggcggcagctgcagctgcagcggcaggagcaccacct
aacccggcagcctcggcactgggtttgaacccactgctggcaaacggcctcctctctgga
atggacctcacgagtctgcaggccttccagcaaaacctccagaatttacagtccctgcag
ctcactgcaggcctgatggggctgccgtctgatgctagcaacctggctgcaagtaacttg
gctgccatgtttcccatgatgctgtctggtatggcgggactgccaaacctccttagcatg
ggcagcttgcttgggaagcctgctcaggaagctgcaggaggctctgaagagaaaacaaag
ggaataaccagcggtggaacaggagagtcatctgcctctaaagccccctctcacacctca
gacaccaaaggagaaaggacagagggctcaaacacgactccttcctccacttccagctct
gcttcctcttcctccgccacacaaagtgcttcagctgcctctgcagcctccagtcagcca
ctgtctcttaaccccttgttactctccagtatgctttacccagggatgcttctcactcca
ggccttaaccttcctgtgtccaccacacagccacagagctcaaacagtgaccccaccctt
ccaactggtcctcctctaccttcagtttcccagtcatcacataaggagacagagcagcca
gagggagacaaggatggagaggaggaagacgagcctttggatgagggtgagggggaggag
gaggaggaggaagaggatgaatccatagaacaaaaggataacagtggtcctgaaggttca
gggaaagcagagtcttcttcagagtctgggagctcttcctcatcctcagacgattcagac
tccagtgatgaggactga
DBGET
integrated database retrieval system
