Oreochromis niloticus (Nile tilapia): 100712199
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Entry
100712199 CDS
T06104
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-1
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
onl
Oreochromis niloticus (Nile tilapia)
Pathway
onl04080
Neuroactive ligand-receptor interaction
onl04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
100712199
04082 Neuroactive ligand signaling
100712199
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
onl04040
]
100712199
Ion channels [BR:
onl04040
]
Ligand-gated channels
GABA-A
100712199
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Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
CytochromB561_N
Motif
Other DBs
NCBI-GeneID:
100712199
NCBI-ProteinID:
XP_003446980
Ensembl:
ENSONIG00000008432
UniProt:
A0A669EA97
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Position
LG10:complement(20896337..20932593)
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AA seq
461 aa
AA seq
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MCGHSRTLFLYLWACLLFTNSVLFGKSSGQNGMTDQQKDNTTVFTKILDSLLDGYDNRLR
PGLGERVTEVKTDIFVTSIGPVSDHDMEYTIDVFFRQSWKDERLKFKGPMAVLRLNNLMA
SKIWTPDTFFHNGKKSVAHNMTMPNKLLRITEEGTLLYTMRLTVRAECPMHLEDFPMDAH
ACPLKFGSYAYTRAEVVYVWTRGAAQSVVVAEDGSRLNQYDLMGQSVDSGVVQSSTGEYV
VMTTHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVLTMTTLSI
SARNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTKRGYAWDGKSVVPEKQKKKK
ESLLKKNNTTAYPAATATAFAPNIARDPGLATIAKSAPPPPTEPKEEPKPKPPEAKKTFN
SVSKIDRIARIAFPLLFGTFNLVYWATYLNKKPKLQGANPH
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atgtgtggacacagccggacgctctttctgtatctgtgggcttgcttgctttttaccaac
agcgtactgtttgggaaaagctctgggcagaacggcatgacagatcaacagaaagataac
actacagtcttcacaaagatcttagacagccttctggatggctatgacaatcgcctcagg
cctggactaggagagcgtgtaactgaagtcaagactgacattttcgtgactagtattggg
ccagtttcggaccatgacatggagtacacaattgatgtgttcttcagacaaagctggaag
gatgaaagattaaagttcaaaggccccatggccgtgctacgtctcaacaacctgatggcc
agcaagatctggacccccgatactttcttccacaatggcaaaaagtcagtggcacacaac
atgaccatgccaaacaagcttctgcgaattacagaggaaggcacactactttataccatg
aggcttacagtaagagcagaatgtcctatgcatctagaggacttccctatggatgctcat
gcttgtccattgaagtttggcagctatgcctacactagagctgaggtggtgtatgtgtgg
actagaggggctgcccagtctgtagtggtggcagaggatggatccagattaaaccagtat
gatctgatggggcagagtgtggattctggtgtggtccagtccagcacaggagaatatgtt
gtgatgacaacccacttccacctgaagaggaaaattggttactttgtgatccagacatac
ctaccctgcatcatgacagttatcctctcccaagtgtctttctggctcaacagagaatct
gtccctgccaggactgtctttggagtgacaactgtcctgactatgaccacgctgagtatc
agtgccaggaactctctccctaaagtggcctatgccacagctatggattggttcattgct
gtctgctatgcctttgtcttctcagccctcattgagtttgcaacagttaactacttcacc
aagaggggttacgcttgggatggaaaaagtgtggtgccagagaagcaaaagaaaaagaag
gaatctctccttaagaagaacaacactacggcctacccagctgccactgctacagccttc
gcccccaatattgccagggaccctggattggctactatcgctaaaagcgccccaccaccc
ccaactgagcctaaggaggagccaaagcccaagcctccagaggccaagaagacctttaac
agtgtgagcaagatagacaggattgccagaatagccttccctctgctctttggaaccttt
aacttggtctactgggcgacctacttgaataagaagcccaaattgcagggggccaatcca
cactaa
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