Oreochromis niloticus (Nile tilapia): 100712279
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Entry
100712279 CDS
T06104
Symbol
edar
Name
(RefSeq) tumor necrosis factor receptor superfamily member EDAR isoform X1
KO
K05162
tumor necrosis factor receptor superfamily member EDAR
Organism
onl
Oreochromis niloticus (Nile tilapia)
Pathway
onl04060
Cytokine-cytokine receptor interaction
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
100712279 (edar)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04050 Cytokine receptors [BR:
onl04050
]
100712279 (edar)
Cytokine receptors [BR:
onl04050
]
Tumor necrosis factor receptors
TNF receptor superfamily
100712279 (edar)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Death_EDAR
TNFR_c6
Motif
Other DBs
NCBI-GeneID:
100712279
NCBI-ProteinID:
XP_005451999
Ensembl:
ENSONIG00000004260
UniProt:
I3J922
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All DBs
Position
LG16:complement(12232508..12276873)
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AA seq
521 aa
AA seq
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MSERREKKSIFLSSLLVCCVFASAEYNICGQNEFFNQTSNSCQACPQCQPGHEPYMTCGH
GVKDEGFTCVLCPKGKYSGGKYEICKRHTDCHALYSATVHIPGTPERDAECGPCLPGYYR
LGNRSEKPYWMVCHSCQNAPRNTKECMQTNKPKEKTIVYSGSTTVFPSVIKDSPGQGHLA
TALIIAMSTIFIMAIAIVLIIMFYILKAKPNGQACCSGQVVKAVEAQTNKQEDKKDVPDN
VVIYSEKDEFDKLKAPPQKTVKSENDASSENEQLLSRSIDSDEEAGTEKQGSAETTNLDP
NLCLVNLGNKPDLCLLSLGLLDRGRVCNGTPGIAASQTNIPSPNHMNNVNRIASSNHISS
VNGINNNNKTPGMLQNRRRKILDLYARACNATEGLSPTELPFDCLEKASRMLSSSYSSDA
AVVKTWRHLAESFGLKRDEIGGMSDGLQLFERVSTAGYSIPDLLTRLVQIERLDAVESLC
ADVLGSSEGAAVAGRQGIGSFHSQLVCPSPCPSPSHRCASV
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaaaggagggagaagaagtcgatctttctgtcctcgttattagtgtgttgtgtg
tttgctagtgcagaatataacatctgtggacagaatgagttcttcaaccagaccagtaac
agctgtcaggcctgccctcagtgccagccaggacatgagccatatatgacctgcggtcat
ggtgtgaaggatgaaggctttacctgcgtgctgtgcccaaagggaaaatactccggaggg
aaatatgagatctgcaaacgtcacacagactgtcatgccctttacagtgccactgttcac
ataccaggaactcccgaacgcgacgcagagtgtggaccctgtttacccgggtattacagg
ttggggaacagatcagaaaaaccctattggatggtttgccattcctgccaaaacgcacca
cgcaacaccaaagaatgcatgcaaaccaacaaaccgaaagaaaaaacaatagtttacagt
ggtagcacaactgtgttcccttctgtaattaaagattcccccggacagggtcacctggca
acagctctcattatcgccatgtcgaccattttcatcatggccatcgccattgttctcatc
atcatgttttacatcctgaaggccaaaccgaatggccaggcatgctgctccggacaggtt
gtgaaagcagtggaggctcagaccaacaaacaggaagacaagaaagacgtccctgacaat
gtggtgatatactcggagaaagacgagttcgacaaactgaaagctcctcctcagaagacg
gtgaaaagtgaaaacgatgcatcttcggaaaatgagcagctgttgagccgcagcatcgac
agcgacgaagaggcaggaacagaaaagcagggatcggcagagaccactaacctcgaccct
aacctgtgcctggtcaacttaggcaacaaacccgacctctgcctgctctccctgggtctc
ttggaccgtggccgcgtatgcaatggcaccccaggcattgcagccagtcagactaacatc
ccgagtcccaaccacatgaacaatgtcaaccgcatcgccagcagcaaccacatcagcagt
gtgaatgggatcaacaacaacaataaaaccccagggatgctacagaatcgaaggagaaag
attctagatctgtatgccagagcctgcaacgcgactgagggcctcagccccacagagctt
cccttcgactgcctggagaaggccagccgcatgctgagctcctcctacagcagcgacgcc
gccgtggtgaagacgtggaggcacctggctgagagttttggactgaaacgcgacgagatc
ggaggcatgagcgacggcctgcagctcttcgagagggttagcacggcgggctacagcatc
cccgacctcctgactcgcctggtgcagatcgaaaggctggacgccgtggagtcgctctgt
gcagatgtgctgggcagtagcgagggggcagcagtggctggacggcagggaattggcagt
tttcacagccagttagtgtgtccttccccctgcccatctccatcccatcgctgcgccagt
gtttaa
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