Oreochromis niloticus (Nile tilapia): 100712331
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Entry
100712331 CDS
T06104
Name
(RefSeq) uncharacterized protein LOC100712331
KO
K17386
platelet-derived growth factor subunit B
Organism
onl
Oreochromis niloticus (Nile tilapia)
Pathway
onl04010
MAPK signaling pathway
onl04020
Calcium signaling pathway
onl04510
Focal adhesion
onl04540
Gap junction
onl04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
100712331
04020 Calcium signaling pathway
100712331
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
100712331
04540 Gap junction
100712331
09142 Cell motility
04810 Regulation of actin cytoskeleton
100712331
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
onl04052
]
100712331
00536 Glycosaminoglycan binding proteins [BR:
onl00536
]
100712331
Cytokines and neuropeptides [BR:
onl04052
]
Cytokines
Growth factors (RTK binding)
100712331
Glycosaminoglycan binding proteins [BR:
onl00536
]
Heparan sulfate / Heparin
Growth factors/receptors
100712331
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDGF
PDGF_N
Motif
Other DBs
NCBI-GeneID:
100712331
NCBI-ProteinID:
XP_003459406
Ensembl:
ENSONIG00000038264
UniProt:
A0A669EL51
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Position
LG6:9323557..9338762
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AA seq
545 aa
AA seq
DB search
MRSLVLVLLVAALLAARLRLGSAEGDPLPSSLVDLVRNSPISSVEDLKLLLQEETDAIEE
EEDVHDIIPNRTHGRYIRSLVEAQPAQQAACKVRTEVMEVTRSMLDRRNANFLLWPPCVE
VQRCSGCCNSPRMECVPTVTSTRYLQVIKIQYINRKAHYEKAIISVEDHVSCRCQSLSSF
SSSSVPSNPIPPPPPPQQPPPSSHVPRPVQPPSPKTQTSKADLHRHDDLKYNQQHYGPEE
REPAVRQWQHGSYTQLVHLTQPRVHQIPQPGLLRPVSSWPSEARAEHSVMGSTQQVGHGS
GFEGSREESGVHTSNSGGQVHHPDHTKRQQQLLEHQQRQQYQHHHQSHYPQQYNHGATED
RELRTQYRLNAPQSDSASPPASQTEPPKFEETTTLPLTTIQKDFVTSQKSIEVTNHKQAE
TETASQKEGNEREESGSANSGDSATAELANQGKKKDSNVTGEDGHLTEAERRQKLLELVQ
REPNEQTHPLHPHQRPKPTTFKTASSTAAPISPSARKAPFRPASPRRRRKHRKRISKAAM
RVMIM
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atgaggtccttggtcctggtgctgctggtggctgcgcttttagcggcccgtctccggctc
ggcagcgctgagggggatccactcccttcatctctggtcgacctggtgaggaactctccc
atctcctctgtggaagacctgaagctgcttctgcaggaggagaccgatgcaatagaagag
gaagaggacgtgcatgatataatcccaaaccgcacccatggtcgctatattagaagtctt
gtggaggcgcagccagcccagcaggcggcctgtaaagtgcgaacagaggtgatggaagta
acgaggtctatgctagatcgccgcaatgccaacttcctattgtggccgccatgtgtggag
gtgcagcgatgttcaggctgctgcaacagtccacggatggagtgtgtccctacagtcacc
tccaccagatacctacaggtgataaagattcaatacattaacaggaaggcccattatgaa
aaagccatcatctcagtggaagatcacgtcagctgcaggtgccagagcctgtcctccttt
tcctcctcatctgttccctctaaccccattcctcctccacctcccccacaacagccgcca
ccttcctcccacgttccccggcccgttcagcccccttcacccaagactcagacctccaag
gccgacctccatcgccacgatgacctaaagtacaaccagcagcattacggtcctgaagag
cgtgagccggcggtgaggcagtggcagcatggcagttacacccagcttgtacacctgacc
cagcccagggtgcatcagataccccaacctgggttgctcaggccggtcagcagctggcca
tctgaagcgagggcggagcacagtgtcatgggaagtacacagcaagtggggcacgggagt
gggtttgaagggagcagggaggaaagcggtgtgcatacatcaaacagtgggggccaagtg
catcaccccgatcacacaaagaggcagcaacagttgttagagcatcagcaaaggcagcag
tatcagcatcatcaccagtcacattatccacagcagtacaaccacggagcaacggaggac
cgagagctgaggacgcagtatcgcctcaacgctccccagtcagacagtgcctcaccccct
gccagccaaaccgagccacccaaatttgaagaaaccaccacccttccattaacaaccatt
cagaaagactttgtgaccagccaaaaaagtatagaggtcacaaatcacaaacaggctgag
actgaaacagccagtcaaaaagaagggaacgagagggaggaaagtggctcagccaacagc
ggggactcggccaccgcagagctggccaatcaggggaagaaaaaagactctaatgtgacc
ggtgaggacggtcacttaacagaggcagaaaggaggcagaaacttctggagctggtacag
agagaaccgaatgagcagactcatccgcttcatcctcaccagagaccaaagccaactaca
tttaaaacagcttcctctacggcggctcctatttcaccttcagcccgtaaggctccgttt
cgtcccgcctcgccacgccgcaggaggaagcaccgcaaacgcatcagcaaagcagccatg
agagttatgatcatgtaa
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