Oreochromis niloticus (Nile tilapia): 100712461
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Entry
100712461 CDS
T06104
Symbol
srrm1
Name
(RefSeq) serine/arginine repetitive matrix protein 1 isoform X2
KO
K13171
serine/arginine repetitive matrix protein 1
Organism
onl
Oreochromis niloticus (Nile tilapia)
Pathway
onl03013
Nucleocytoplasmic transport
onl03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
100712461 (srrm1)
03015 mRNA surveillance pathway
100712461 (srrm1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
onl03019
]
100712461 (srrm1)
03041 Spliceosome [BR:
onl03041
]
100712461 (srrm1)
Messenger RNA biogenesis [BR:
onl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
100712461 (srrm1)
Spliceosome [BR:
onl03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR-related proteins
100712461 (srrm1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PWI
Motif
Other DBs
NCBI-GeneID:
100712461
NCBI-ProteinID:
XP_013127374
Ensembl:
ENSONIG00000008206
LinkDB
All DBs
Position
LG19:complement(27499396..27510886)
Genome browser
AA seq
783 aa
AA seq
DB search
MQINLTGFLNGKNARDFMKDLWPLLLSAQENIAGIPSAFLEQKKEEIKQRQIEQEKLASL
KKVDEEKKEKDLRERAQSKSPRRRKTRSPSPRRRSPSPRRRSPAKRERKRSPSRSPRRKQ
ASPVGGSSPPPPLMQLSTKSSEQPVEPDTSGRAVPEAVVQEASSTCETVVEVVKADSVNE
VKEQSPEKTLKKEERPRSREREKDTRRERHHRSRSHSRSRRRRSRSRSYSPRRRQSPRRR
MSPRRRSPPRRAPASARHRHRRSPVRRRRSRSASSSGSSSSGSRSPKKAVKRISTTPPRK
QVHHPDTSISPTGKNRRSPSPRARRGRGSPSPPRSSGFKRKQGGRADSPPDNVKPRPSEG
SESEEDKNEKGATADSVQQRRQYRRQNRQSSSETGSSSSEDEAPKRATGGSGARNGEVRR
RRSRTPSPRRRHRDPSPRKRRSPSPVRRRRTPTPPRRRRSPSPPQRRRSPSPPPRRRSPS
PRRYSPPIQRRYSPSPLPSQKRKLSNSPMKRSSPATRRRPSRSPRHRSSPPPRRRSPPSS
SSPPRHRRSPMLPPGRRSRDARSPVAASRRLSPSPANRSHAVRGSTTPPRRYETSSTSPS
NQRRQQSPPHNKVIRRVSRTPERRDNQRPSPSPQPIRRASSRSVSPEPAAQKRPTQASAS
PSPSRSASASPPPAKKASSGSGSRSPSKTSDVDGSAKKKKKKKEKKHKKEKKHKKHKKHK
KEKSSGAAVTGDTQENQAAEEDRDSRKESDSDVENTLDDLEKHLREKALRSMRKAQMSPS
QMS
NT seq
2352 nt
NT seq
+upstream
nt +downstream
nt
atgcagatcaacctgacaggctttctgaacgggaagaacgcccgggactttatgaaggac
ctttggcccctgctgctgagcgcccaggagaacattgccggcatcccctcagcttttctg
gaacagaagaaagaggaaatcaaacagagacagattgaacaggagaaacttgcttctctg
aagaaggtggatgaggaaaagaaggaaaaggacctcagagaacgggctcagtcaaagagc
cccaggaggcggaaaacgaggtcaccatcaccgcgaaggaggtcaccatcaccacggagg
aggtcaccagcaaagcgggaaaggaaacgcagcccctcgcgctcaccaaggcgcaaacaa
gctagtccagttggtggcagttcaccccctccgcccctgatgcagctgtccacaaaatct
tcggagcagccggtagaaccagatacttcaggaagagctgtgccagaggcagtcgtccaa
gaagcttcttccacctgtgagacagttgtggaagtagtgaaagccgactctgtgaatgaa
gtcaaagaacagtcgccagagaaaacccttaagaaggaagaaagaccaaggtcgcgagaa
agggagaaggacacgaggagggaaagacaccatcgctcacgctctcattcccgctctcgg
agacgccgctcgcgctctagatcgtactcccctcgcagaagacaaagtcccagaaggaga
atgtctcctcgtcgtaggagccctcctcgacgtgcaccagctagtgccaggcacagacac
aggcgttcccccgtccgcaggaggcgctcccgctctgcttcatcctctggtagcagctca
tcaggctctcgctcgcctaaaaaagcagtgaaaagaatatctaccacaccaccccgaaaa
caggtccatcatcctgatacttccattagtcccacaggcaagaacagacgatcgccgtct
ccacgagctagaaggggccggggctctccttccccacccagatcatcagggtttaagaga
aaacaaggaggaagggctgattctccccctgacaacgtcaagcccagaccatctgaaggc
tccgagtcggaggaggataaaaatgagaaaggggcaacagcagattcggtgcagcagcga
cgtcagtatcgcaggcagaaccgacaatcgtcttcagaaacggggtcttcatcctcggaa
gatgaggcgcccaagagggcaacaggagggtcaggtgccagaaatggtgaggtcaggagg
aggcgcagtcgtacaccgtctcctcgaaggcgacacagggatccctctccgaggaaaaga
cgttctccatctccagtacgcagacgtcgcacccctactcctcctcgccgtcgcagatct
ccctctcctcctcaaagacgcaggtctccttccccaccaccccgtcgtagatctccatcc
cccagacgatattctccccctatccaacgtcgctacagcccttcacctttgccttctcag
aagaggaaactgtctaactcgcccatgaaacgctcttcaccggctaccaggcgacgtccc
tccagatcccccagacacagaagctctcctcctccaagaagacgatcccctccctcctct
tcatctccacccagacacaggaggagccccatgctgccaccggggcggcgaagcagagat
gcacgatcccctgttgcagcatccagacgcctctccccatcccctgcaaaccgcagtcac
gctgttagaggatccacaacccccccacggcgctatgaaacctcgagcacatctccgtct
aaccagcgcagacagcagtcacctccacacaacaaagtcatccgcagagtttcacgcacc
ccagaacgccgtgacaaccagagaccgtctccaagccctcagcctataagaagagcgtcc
tccagatctgtttcccctgaaccagcagctcagaaacgtccgactcaagcatccgcctcc
ccctccccgtctcgctctgccagtgcatctccaccaccagccaagaaagccagcagcggt
tccggaagtcgatctccaagcaagacttcggatgttgacggcagtgcaaagaaaaagaag
aagaagaaggaaaagaaacacaagaaggagaagaagcataagaagcacaagaagcataag
aaggagaagagcagtggtgctgctgtgactggagacacacaggagaaccaggctgcagag
gaggacagagattccagaaaggaatcggacagcgacgtggagaacaccttagatgatctg
gaaaagcaccttagagagaaagcgctgcgctccatgaggaaggcccagatgtctccatca
cagatgtcctga
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integrated database retrieval system
