KEGG   Oreochromis niloticus (Nile tilapia): 100712509
Entry
100712509         CDS       T06104                                 
Symbol
patl2
Name
(RefSeq) protein PAT1 homolog 2 isoform X1
  KO
K24823  protein PAT1 homolog 2
Organism
onl  Oreochromis niloticus (Nile tilapia)
Brite
KEGG Orthology (KO) [BR:onl00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:onl03019]
    100712509 (patl2)
Messenger RNA biogenesis [BR:onl03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     100712509 (patl2)
SSDB
Motif
Pfam: PAT1
Other DBs
NCBI-GeneID: 100712509
NCBI-ProteinID: XP_013121938
Ensembl: ENSONIG00000011519
LinkDB
Position
LG8:16371920..16378806
AA seq 719 aa
MSDSEQQHDAEQVCEPQWPENGEDWSDGEGGTDMDSGLLQAMAEEDEEINVHNEETFGMD
LDANGTTEESSSSLQFGEALPPPPPPPPPPATPPPPQPKPRSPRRAPSPPQQKPQYFPRA
SLRQRGRSRGQRGALGRGQMFEDPAVMRIIEGRPSLKSLDSAIVDCGTAMYQRPFEDDTM
MPSYRKTRRTSGSILEDSAIVCVIGHRGRGQHLNSNFVDLPYSAGPLYGVRRGESRGLYS
RRPFGHRGPTQVYPPIVPRSPLFPRQPRQHYNQQTRAFMFPPTHPCPSTPQTPKMMQLRF
GANSPRPSPFYSPSSNPVQPFSRYPGPATQLHPQHKRLLSQKQRLFQRKPEGWDPYCNLM
TAKEKEWITRLQMIQLQSENPYLEDYYYQEYYRRIEAKMAEEELGIRSKREPPKLTTPYV
KKTDAYTPVVHIEGSLGQVAVSTCYSPRRAISAVHAVQPQGLLEDQKDTRLQRLDILNKI
EKLFMVLLEVEETERMKTPLLSEAEERRLMEKIQRKVEHIYSQLQHHNPLESGGDFLPFL
LISKGKKLVARLLPFLKHDSALKILRVVTINLPTLMSRDTDETLPVLYPPLRNVIGGMAF
SQLIGVLKDLTSLESLTAYECLELACQNKFGLSLLYALLSHGEKLLSSGVPLEPSIGDFE
TWTDIIFQVAGQLSQCSLVEPLLLPSNLLTLFCRYLDKRTVHQLKSNMESVTGCLALPS
NT seq 2160 nt   +upstreamnt  +downstreamnt
atgagtgactcagagcagcaacacgatgcagagcaggtgtgcgagccgcagtggcctgag
aatggagaggactggagtgatggagaaggtgggacggatatggactcggggcttctgcag
gccatggcagaggaagatgaggagataaacgtccacaacgaggagacgtttgggatggat
ttggatgcaaacgggaccacagaagagtccagcagcagccttcagtttggagaggctctg
ccaccgccgcctccgccgccgccaccacctgcaacaccccctcccccacagcccaaacct
cgctctccccgcagagccccgtcgcctccccaacagaagccgcagtattttccgcgggct
tccttgaggcagcgcggcagaagtaggggacagagaggagctctgggcagggggcagatg
tttgaagacccagctgtgatgagaataatcgagggccgaccaagcctcaagagccttgac
agtgccatagtagattgcgggaccgccatgtaccagcgtccctttgaggatgatacgatg
atgccctcttacagaaaaaccagaagaacctcaggatccatacttgaggacagtgctata
gtgtgtgtaattggtcacagaggtagaggtcagcacctgaactccaactttgttgacttg
ccgtactccgccgggcccctttatggggtcaggcgaggggaatccagaggattgtactcc
agaagaccgtttggccatcgaggacccactcaggtgtacccacccatagtaccaagatcc
cccctcttcccacgtcagccacgccagcattacaatcagcagaccagggcattcatgttt
cctccaacccacccctgcccctcgacgcctcagactcccaaaatgatgcaacttcgcttt
ggagccaactcaccaaggccgtcccccttttacagcccctcttctaatccagtacagcct
ttcagtaggtaccccggtccagccacgcagcttcatccccaacacaaacgactgcttagt
caaaaacagcggctattccaaagaaagccagagggctgggatccgtactgtaacctcatg
acggccaaagagaaggagtggatcacccggctgcagatgatccagctgcaaagtgagaat
ccttaccttgaagactactactatcaggagtactatcgtcgaatagaagcaaagatggcc
gaagaggagctgggcataaggagcaagagggagccccctaagctcaccacgccttacgtc
aaaaaaacagacgcctacacaccggtggtgcacattgaaggctctttgggtcaagttgca
gtttccacgtgttactctcctcgccgagccatcagtgctgttcatgcagtccagcctcag
ggtctgcttgaggatcagaaagacaccagactacagcgattagacatccttaacaaaata
gaaaagttgttcatggttctgttagaggtggaggaaacggagaggatgaaaactccattg
ttgtccgaagcagaagaaaggaggttgatggagaagattcagaggaaagtggagcacatc
tactcccagctgcagcaccacaatcccctggaatcgggaggggacttccttccttttctg
ctcatctccaaaggcaaaaagctcgtcgcccgtctgctgccgttcttgaaacacgattct
gcactaaaaatcttgcgtgttgtcaccattaacctaccaacactgatgagcagagacaca
gacgagacccttccagtgctttacccacctcttcgaaatgtgatcggtgggatggcgttc
agtcagctcattggcgtcctcaaagatctgacctctttggagtctctaacggcatacgag
tgtcttgagctggcatgtcagaacaagttcggactgtccttactgtacgctctgctctcc
catggagagaagctgctgtcctcgggtgttcctctagagcccagcatcggggactttgag
acctggactgacatcatattccaggtggcaggacaactatcccagtgttcgctggtggag
ccgctcctcctgccctcaaacctgctcactctcttctgccgttacctggacaagcgtacg
gtgcatcagctgaaaagcaacatggagtctgttactggatgcctggctcttccatcttaa

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