Oreochromis niloticus (Nile tilapia): 100712586
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Entry
100712586 CDS
T06104
Name
(RefSeq) apoptotic chromatin condensation inducer in the nucleus
KO
K12875
apoptotic chromatin condensation inducer in the nucleus
Organism
onl
Oreochromis niloticus (Nile tilapia)
Pathway
onl03013
Nucleocytoplasmic transport
onl03015
mRNA surveillance pathway
onl03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100712586
09122 Translation
03013 Nucleocytoplasmic transport
100712586
03015 mRNA surveillance pathway
100712586
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
onl03019
]
100712586
03041 Spliceosome [BR:
onl03041
]
100712586
Messenger RNA biogenesis [BR:
onl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
100712586
Spliceosome [BR:
onl03041
]
Complex C
Other components
EJC/TREX
100712586
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RSB_motif
SAP
Motif
Other DBs
NCBI-GeneID:
100712586
NCBI-ProteinID:
XP_013120948
LinkDB
All DBs
Position
LG18:7014118..7032737
Genome browser
AA seq
1698 aa
AA seq
DB search
MADLEDVTLDGRPLQSLRVADLKAALEERGLSKSGQKNTLIKRLKGALMLENLQRTSTAH
IGLQPNSQIGEEMSQNSFIKQYLAKQQELLRQRLEREAREAYDTNEQEEHAEVNNSTSCP
PPAEDVTPALAEQHKPAGTSGEEGLFGAVNEGQANRNQEADMSSPPASGSVPMRVPAAEQ
RPERGSASSEVPGDSDDDDSEDGDKDGDDDDWDSSARRRNFREPARGPTTRERSAASRQP
QQQHIPSLLSPQLRQPTPPPSPPPELSFPLPDTPKQSPPSPDVPPARRSPSSSSSGSSSS
GSRSSSPEPQRSGHAERRPGPLTLLARKMESEGAFSGAGWHGTDGEGDRQDSNSSSATSF
PGRGPPESLVSATTHTSNTAEHVPFPIMPGTNQGVTGAHSAHIHVPVSTLEPTVPDERVR
EMESDLERQEKLRKRRPERAAVEEREKALALERKREQALERERFEQQQALEKEEKALQKE
KELALEKEKQEREQALAKEREEQMRALELERQAELQRLKLLEQELQREREEREKREREEM
ERAALERERERLERERALEAERQERERIEREEALERERLEKEKALEQERIEREKALEQER
IEREKALEQERIEREKALEQERIEREKALELERLERERALELERQEREKALELERLEREK
ALEMERREREKALELERLEREKALELERREKERLEREKALERERIEREKALERERVEKER
AERRAALEQERIERERALQQEELERARKEMERALEQEREKALESERLENEKAVQKEKEEQ
ERKLEQEKDKTRVAEKKSEGHLSPSKCGLEAGLTSLPTPHPLSTGPAINSSAEAGDREQI
HAPEPQSEGQATEYSAAISTTSLSPHSSFKKFRFVKDPAQPSSTSMVIKRPRTFSDSPQP
RTSPVTSPTTVGKGQSEGHRPSVKQEDSELRTNQQVTAAPPGSVKIQSEEDTAVITEMGP
NEERATRLVLEDKEQAASGKTEQAAKESIKKVKEAVESKGLGSSVGEAEQRGRDSKKERI
RTRQRSSSDSSSSESDSGSSSSQSSGSSSSSQEKKNSTSRVTKEETSKRDSSTQHVAAQH
EDLKKSSKTSPCKRETSAEKANTTPDGDSHNVAQFAEAPTGEEKHGKRTDSEEEEEKDKQ
RQMKESTMADPEKFQETSEEKSKAFSARKISLSSSKSSPGTSSAEGEQESGTVAGRKRRW
GSSTAVTAKKPSISITTDSLKSLIPDIRPCLGQEAVVDLHPEEAVLSGADDEDRERSDQD
LQIRRTVTQVVHSESQENGQREAKRSRQEEVEEDDLQVDQERTKAHEEQMDTSIPVAVET
HSPTHTSHDVEINTVTPSDTLIRRSISQQKTGVSITIDDPVRTAKQPSPPRGKVSTIVHI
CNLVRPFTLGQLKELLSRTGTLVEEGFWIDKIKSHCYVTYSSVEEAVATRAALHGVKWPQ
SNPKVLSVDFCQQDELDFHKGLGAADKPGAEEQGPGSGRGRTSGLPSLLPERDQWAERER
EMERRERARAEREWDRDKVREFGKHGEEKEGGPRRSRSRERRRKERGKSKEKKEKMAEDP
PAKLLDDLFRKTKAAPCIYWLPLTDEQFAQREAARAERAKEREKRRKEQEEEEKKREEER
KERVKAGGGTTERSEGEKDKDRDRERDRGRDRERERERERERERENDKRRDGYRRPGGSG
AGGGRRSRSRSEPRERRR
NT seq
5097 nt
NT seq
+upstream
nt +downstream
nt
atggcggaccttgaagacgttacgctggacgggagaccgctccagtcccttcgagtagcg
gacttaaaggctgctctcgaggagagggggctgtcgaagagcggccagaagaatactctc
atcaaaagactcaaaggggctctcatgctggagaacttgcagaggacctccacagctcat
attggactacagccaaactctcagattggcgaggaaatgagccagaacagctttataaag
cagtatctggctaagcaacaggagctactgaggcagcgtctggagagagaggctcgcgaa
gcgtatgatacaaatgagcaagaggagcatgcagaagtcaacaatagtacatcgtgtcct
cctccagccgaggatgtcacaccagcattagctgagcagcacaagccagctggcacctct
ggtgaagagggattgtttggtgcggtaaatgagggccaagcaaacagaaaccaggaggct
gacatgtccagtccacctgcttctggctctgtgcccatgcgcgttcctgccgctgagcaa
aggccagagagaggctctgcatccagtgaagtcccaggtgacagcgacgatgacgacagc
gaggatggtgacaaggacggtgacgatgacgactgggacagcagtgctcgaaggagaaac
ttcagagagccagccaggggacccacaacaagggagaggtctgcagcgtcccgtcaacca
cagcagcaacacatcccttctcttttgtcacctcaactccgccagccaacaccgcctccc
tcccctccaccagaattatcattccctttgcctgacacccctaaacagagcccacctagt
ccagatgttcccccagccaggcgttcccccagttcttccagctctggttcctccagcagt
ggtagccgcagtagcagccctgagccacagagaagtggacatgctgaacgcaggcctggc
ccgctaacccttctggcacgtaaaatggagtcagaaggtgctttctccggagcaggatgg
catggcactgatggcgaaggtgataggcaggacagcaattcatcctcagctacatcattt
cctggcagaggaccaccagagagcctggtatctgccaccactcacacctctaacactgca
gagcatgtaccatttccaataatgccgggcaccaatcagggtgttacaggagcacattcg
gcccatattcacgtacctgtgagtacgcttgagcccactgtgcctgacgagagggtcaga
gagatggagtctgacctagaaagacaagagaagctgagaaaacgtcgcccagaacgtgcc
gcggtggaagagcgagagaaagccctagcactggagcgaaaaagagagcaagctttggag
agagagaggtttgagcaacagcaggccttagaaaaggaagagaaggctttgcagaaggag
aaggaacttgctttagaaaaagagaaacaggagagggagcaagctttggctaaagagagg
gaagagcaaatgagggccttagagcttgaaaggcaggctgagcttcaaagacttaaactt
ctggagcaagaactgcagagagaaagggaggaaagggaaaagcgcgagagagaagaaatg
gagagagcagctttggagcgtgagcgagaaaggttagaaagagaaagagctctggaggct
gagagacaggaaagggagaggattgagagagaagaggctctggaacgggaaaggttagag
aaggaaaaggctttggagcaggagaggatagaacgtgaaaaagccttagagcaagagaga
attgagagggaaaaagccttagagcaagagagaattgagagggaaaaagccttagagcaa
gagaggatcgagagagaaaaggctctagagctagaaaggttggagagggagagggccttg
gagttggagagacaagaaagagaaaaagctttagagctagaaaggctggagagggagaag
gccttggagatggagagaagagaaagagaaaaagctttagagctagaaaggttggagaga
gagaaggccttggagttagagcgaagagaaaaagaacgacttgaaagagagaaagcttta
gagcgagagaggatagagagggaaaaggccttggaacgagagagggtggaaaaagagagg
gcagagagacgggcggctcttgaacaggagagaattgagagagagagagccctacagcaa
gaggaactagagagggcaagaaaggagatggagagggctctggagcaagaaagggaaaaa
gctcttgaaagtgaaaggctggagaatgagaaagcagtgcagaaagaaaaggaggagcag
gagaggaagctggagcaggagaaagataaaactagggtggctgaaaagaagagtgagggc
cacctttctccatccaaatgtggccttgaggctggtctcacatccctgccaactcctcac
cccctctccacaggacctgctataaactcgtcagcagaggcaggagaccgggaacaaatc
catgctccagaaccccagagtgaaggccaagcaacagagtatagtgcagccatttcaaca
acatctctttcaccacactcgtcatttaaaaaattccggttcgtaaaggacccagcacaa
ccctcatccacgtctatggttattaagcggccccgtacattttctgatagtccacagcct
cgcacctcacctgtcacttctcccaccactgttgggaaaggacagtctgaaggacatagg
ccctcagttaaacaggaagattcagagctacggacaaatcagcaggttactgctgcacca
ccgggatctgtgaagatccaatctgaggaggacactgctgttattactgaaatgggtccc
aacgaagaaagagccacaaggctagtgttggaggataaagaacaggcagcttcaggaaag
actgaacaggctgccaaggagtccatcaaaaaagtaaaagaagctgttgaaagcaagggt
ttgggaagctcagtgggtgaagcggagcagagaggaagagattcaaagaaggaaaggata
cgaacaagacaaagatcatcatccgattcctcttcctcagaatcggactctgggtcctca
tcttctcaatcatctggttcatcctcgtcctctcaagagaaaaagaactccacctccaga
gttacaaaggaggagacatctaaaagagattcctcaacgcagcacgtggcggctcagcat
gaggatttaaagaaatcctcaaaaacctctccctgcaaaagagagacgtctgcagagaag
gctaacacaactccagatggagacagtcacaacgtggcacagtttgccgaagcaccgact
ggagaagaaaaacatgggaagagaacagacagtgaggaagaggaggaaaaggacaaacaa
aggcagatgaaggagagtaccatggcagatccagagaaatttcaagaaaccagtgaggag
aaatcaaaggccttttcagctcgtaagatctctcttagcagcagtaaatcatccccaggc
accagcagtgcagagggtgaacaggagtctgggacagtggctggtcgcaagaggaggtgg
ggctccagcacagctgtcactgccaagaaaccttccatcagcatcaccactgactcactc
aagtctctgatcccagacatcaggccatgtctaggacaggaggcagtagttgacttgcat
ccagaggaagctgtcctctctggggctgatgatgaagacagggagcgttctgatcaggac
cttcagattagacgcacagttacacaggtggtgcattcagaaagccaggagaatgggcaa
agagaagcaaagaggagcaggcaagaggaggtggaggaagatgatctacaggtagaccaa
gaaaggacaaaggctcatgaagagcagatggatacctctattcctgtagctgttgaaact
cattcaccaacacataccagccatgatgtagaaatcaacactgtgacccccagcgacacc
ctcatccgtcgctccatcagccagcagaaaacgggtgtttccatcacaattgatgaccct
gttcgcacggccaagcagccctcgccacctcgcggaaaagtctccactattgttcacatc
tgcaacctggtgaggccattcactctgggacagcttaaggaactgctcagcagaactggc
actctggtggaggagggcttctggattgacaaaatcaagtcccactgctatgtcacttat
tcaagtgtggaggaggcagtcgccacacgagcagctcttcatggcgtgaaatggccacag
agcaacccaaaagttctcagtgttgacttctgccagcaggatgaattggacttccacaaa
ggtttgggtgcagctgacaaacctggagcagaggaacagggtcctggctccggccgtggt
cgaacatcgggcctgccctctctccttcctgagcgagatcagtgggctgaacgggaacgc
gaaatggaacgcagggagcgagctcgagcagagcgggagtgggatcgtgacaaggtcaga
gagtttggaaaacacggagaagagaaggagggaggtcctcgaaggtcgcgatcaagagag
aggcgacgcaaggagaggggaaagagcaaggagaagaaagagaaaatggccgaggatccc
cctgctaagctgcttgatgacttgttccgcaagactaaagctgctccttgcatatactgg
cttccacttacagatgaacagtttgcccagcgggaagctgccagagcagaacgggcaaaa
gaacgtgagaaacggcggaaggagcaagaagaggaggagaaaaaaagggaagaggagcgc
aaggagagggtgaaagctggaggaggcacaacagaacgcagtgagggtgagaaagacaag
gaccgagacagagagagagacagaggtcgagatagggagagggagagagagagggagagg
gagagagagagggagaacgacaaacgcagggatggctaccgtaggccgggaggcagcggg
gcgggcggaggccgacgctcacgcagccgcagcgaaccacgagaaaggcggcgctaa
DBGET
integrated database retrieval system
