Oreochromis niloticus (Nile tilapia): 102076010
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Entry
102076010 CDS
T06104
Name
(RefSeq) chondroitin sulfate proteoglycan 4
KO
K08115
chondroitin sulfate proteoglycan 4
Organism
onl
Oreochromis niloticus (Nile tilapia)
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
onl00535
]
102076010
04091 Lectins [BR:
onl04091
]
102076010
Proteoglycans [BR:
onl00535
]
Cell surface proteoglycans
Others
102076010
Lectins [BR:
onl04091
]
C-Type lectins
Others
102076010
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin_3
Laminin_G_2
Laminin_G_1
Cadherin_4
ASFV_J13L
Motif
Other DBs
NCBI-GeneID:
102076010
NCBI-ProteinID:
XP_013126245
LinkDB
All DBs
Position
LG7:26707578..26730768
Genome browser
AA seq
2572 aa
AA seq
DB search
MGNVLADVFLLLLVSTGHVYGVSFYGDGYIYLRTVETSIQTLIHVRFRTSSQSGLLFLAA
GHTDFMLLELISGYLQVRIDLGSGEHSLRSEKGIHLSDLAWHTVDLTHTRHNITITVDRN
SHTGLQIQEPDPELGVEDGLLVGGTAGLKHLYLHNISSGFRGCMDEVVFNQHNLLSSLRP
HSGYKTVHEVSLGCSPQFSATEEDPVSFFSSKAFMSLPPWDVLQEGVFECELYPAAKEEE
DGIVLYSSDNQGGFVAIEIIRGHLVASVGGGEGSKTELHSLTNVNSNHTWYTIQLHLLPH
SVQLKVGKELVKASLSPEIQVIQLKGPLFLGGLDEAARGEARQAGLISVPSGGEGGGSFK
GCLREIRVNTQKTGLPHATVTKDVTVGCKTGQAPQRAILTSPTDLPAVDITTTQTNAKRS
PNFLMLRKLEVSEGGRAPLEPKHIKVNLDFRKLGIHPSQFMFRIEEQPVHGQLRLDLSPD
PDRIMEEGQERTITIGIEEKDRTFSMLDLWQGRVMYVHGGSEDQNDFFTFSVFSSNKKEL
PVFLKGNRLHRFEISISPVNDAPVLSLPEGNYFTLLEKSRRQLTTDVLRVLDPDSSPEEL
VFSSLGNLSTEAGYLEHQDYPGRPINLFSLNDLEEGKISFIHTGVSTSRLALRVSDGQKV
SNTVVLRIITVPLEDKLVNNTGLEVNQGEASVITTNHLAVQVNVADPTVEIWYNVTEFPQ
YGELQRLHSSGEWKPATSFSQKVLEKERIRYLSTYRGLQMQNNITDHFKFKVSIGSLAKQ
EAVFPIAVRWIHFKITRSKMELNGVQAAVLTPEDLHVISKGVKLSESDLHFRMVTVPKKG
QLLLNNKVLQRNSTFSQRNISDGLVRYELINRQHDDTRDTFSFQVFSAHSNSTTYDFRIN
IKAESTTVTVISKGLSVMEGGSKVITRDILFTHTASNREVLYNIIESPRHGHIRRINLSN
STSINDNIMAFTNQDITEERIMYVHDDSETKQDSFTFQIGVYKSHKHTNKKEDGNAEEHT
FNISVQLVNDQRPVRVVDKVFHVAREGQRLVTLNDLRYRDDDSDFEDSWLVYTRRGIPMG
ELVLAGDPSHKLYEFTQRDLEQKKVLFVHRGVSFGRFVLFVSDGKHYVSTLLEVMAQDPY
LQVENNTGLMVQQGGITTLTSANLSVFSNLDIRDPQEVTFEVFLPPKHGVICFIDRESGI
ITDADAISIFTQRDLIAGRLAYRHDGSHKLSDSFNVTARARERSTERQLERGKREVHLDI
GVSVKIYLESHQRPPTVRNNRPVVVEEGQNISISRDNLEVVHEDSQPSEIVFTVHSLPKV
GIIQRLSTDNKHQRMNGGQNYKGNKKQSTPTFTQEDLNQGLVIYQQQTAGSTNDSVLLEA
TNGVTKVGPIRLEIDIIPILLPLQVSNLILDEGSSLPLTSDIIKVASHHFSGMNFLYQVI
NPPRHGHLEHSRIPGMPITAFTHTEVEREYISYIHDGSDTLRDNFTIVANQTETRKHSLP
CTVHINITPVNDETPVVTTNHGLKVWVGSVTEITTGDLSAEDIDTPPEGLEFIVTPPSNG
HLALKSSPSRHILNFTQSHIEGKQLVFVHNGAPSGGFHFQVNDGVNFAPRQIFSTTAHSL
ILTLQRNHPMEVYPGSVTPISDKELQVVTNIADGDIRRNQSVVFAVTSPPKLGRLVRRMP
DNSTGNVSTFTQSMLDDGVILYDQNKPESVGWSAADTFSFTVSLPPAFLPPHTFTILISY
QANEHHDSPQHKTRLLNNAGAVVAEGGRVTIDRSKLDASNLLGKIPESRRKDHHIMYRVI
SFPRYGILSIRGHNLTRNQPDFSQVTLNKFGIIYFHDDSETTSDSFTFRAWVAPLDLPSS
SSSSSLSAFSSDSSSSSSSFSSLYSASSSAFSSLDTVSHHHVKDTTGVTEMFNITVTPVN
DQPPLIRSRAPSMKVVVGERVVLGPDSLQVEDHDTPPEELHYLVISKPNNGYLTLGERPE
PVTSFTQYDVNHGRLHFIQQGDSSTGVFYFNVTDGHHRPLYKLFSLEVIKPSVSIVNNTG
LSLIQGRTAVVLTPNQLAAQTNGQSRATVSYTVTTPPRHGRIAINDQEVTTFRHEDLQFG
RVVYHMTDLSESEDTFQMSVSASSPGVNYGNVTATVKVTVRPLIYLREPVRVPSGIAVKL
GKAMIDASELARISRANPVFEVLSPPKHGKLVKITYDPNRASEVLKSFTFRDVVQGRVAI
EENLSDSDNQLHNNESTLTTAQVHAPATPLNDSFSFLVRSGNVQPAKGELHFTILPHHQM
RHGPGGFNKIDRIGREHTTARLPAHNRTTAGGGGGGQGGGRGGSTAHGEVTVGLHPHILS
HKHHNRTHHKLRPHNRLGNHTRNGSHGGRSKSSIEGAGGGHSHAPQPHTPSIPEKHGPEN
PPDTQLIHVEVLPRPASDPLLIILPLLACLLLIIILIVLILVFRHRKEKQARLRLVQELA
AVPVPTEDSPYLGRPERSVAMPSVMVTPLGSASCPTSPRVPTSPRRSLAPGMTFWGPFEA
DLAGGDGNIRGCNSNERDNTTSSNPLPRTAGFRTSVRSRSPTPTLKESQYWV
NT seq
7719 nt
NT seq
+upstream
nt +downstream
nt
atggggaatgttttggctgatgtttttctgctgctgctggtctccaccggacacgtttat
ggagtttcattctacggagatggctacatctacctgcggacagttgagacgtccatacag
acgttaatccacgttcgatttcgaacctccagtcagtcagggctgctgtttttggcagca
ggacacacagacttcatgcttctggagctgatctctgggtacctgcaggtacgtattgat
ctgggctcaggtgagcattcgttgcgctcagaaaagggcatccatctcagtgatctggcg
tggcacactgtggatctcacccacacccgccacaatatcaccattactgtggaccgaaac
tcccacaccggcctacaaatacaggaaccagatccggagctcggtgtggaggatggactg
cttgttggcgggacagctggattaaaacatctgtatcttcacaacatctcctctgggttt
aggggttgcatggacgaagtcgtcttcaatcaacataacttactgtccagtctcaggcca
cattctgggtacaagaccgtccatgaggtatctctgggctgtagtccacagttttctgca
acagaagaagatcctgtcagttttttcagctcaaaagcgttcatgtcactcccaccatgg
gatgtgcttcaagagggagtgtttgaatgtgaactatatcctgctgcaaaagaagaagaa
gacggcattgtcctgtatagctctgacaaccagggagggtttgtcgccattgagatcata
cgtggtcacctggtggcttcggtaggaggtggagaggggagtaaaactgagctgcattct
ttaacaaatgtaaacagcaaccacacctggtacaccatccagcttcacttgctgcctcac
agtgtgcagctgaaggtaggcaaagagctggtgaaggccagtctgagcccagagattcag
gtcatccagctcaaggggcctctcttcctaggagggctggatgaagcagctcggggagaa
gcaaggcaagctggattgatttctgttccatctggaggagaaggaggaggctcctttaaa
ggctgccttcgtgaaatcagggtgaacactcaaaaaacaggcctacctcatgccacagtc
accaaggatgtcaccgtgggctgtaagacagggcaggctccacagagagcaattctcacc
agcccaacagatcttcctgcggttgatatcacaactacacagactaacgcgaagaggagc
cctaacttcctgatgctgaggaaactagaagtatctgagggagggcgggcacctcttgaa
ccaaaacacataaaggtgaatttggacttccgtaaactgggcattcatccatcccagttt
atgttccgcattgaggaacagcctgttcatggccagctccggttggacctgagtccagac
cccgacaggataatggaggagggccaggagaggaccatcacgataggaattgaggagaag
gaccggacgttcagtatgctggacctctggcagggcagggtgatgtacgttcacggcggc
tcagaggaccagaatgacttcttcacattttcagtcttctccagcaataagaaggagctt
cctgtgtttctcaagggcaaccgtctgcaccggttcgaaattagcatcagtcctgtgaac
gatgcccctgtgctcagcctgccagagggaaactattttactctactcgagaagtccaga
cgacagctgactacagatgtgctgagagtgctagaccctgacagcagtcctgaggagctc
gttttcagctccctgggaaacctcagcactgaggctggataccttgagcatcaggattac
cctggcaggcccatcaacttgttctccctaaacgatctagaggagggtaagatcagcttt
atccacacaggggtctcaacttccaggctggctcttagggttagtgacgggcagaaggta
agcaacacagtagttttgaggataataaccgtgccactcgaagataaactggtgaacaac
accggactggaggtgaaccaaggggaagcttcagtcatcaccaccaatcaccttgcggta
caagttaatgtggctgaccccacagtagaaatctggtataatgttacagagttcccacaa
tatggcgagctccagaggttgcactcaagcggcgaatggaagccagcgacctctttctct
cagaaagttctggaaaaagaacggattcggtacctcagcacctaccgtggcttacagatg
cagaataacatcactgaccactttaaatttaaagtcagtatcggttccctggctaaacaa
gaggctgttttccccatcgcggtacgatggattcacttcaagatcacacggagtaagatg
gagctcaatggcgttcaggctgccgttctcactcccgaggacctccatgtgatttctaag
ggtgttaagctcagtgagagtgacctccatttcaggatggtaacagtacccaagaaaggt
cagcttctcctcaacaacaaggtcctacaaaggaactcaaccttcagccagaggaacatc
agtgatggtttggtgaggtacgagctaatcaaccggcaacatgacgatacgagagacacg
ttcagctttcaggtgttttcagctcactccaactcaacaacttacgacttcagaatcaac
atcaaagccgagtcgaccaccgtcactgtgataagcaaaggtctttcagtcatggaagga
gggagtaaagtaatcaccagagatattctgttcactcacacagcgagtaaccgggaggtc
ctctacaacattatagagagccccaggcatgggcacatcaggcggatcaacctctccaac
tcaacttcaattaacgacaacattatggcattcacaaatcaggatataactgaggaaagg
atcatgtacgttcatgacgacagtgaaactaaacaggattctttcacatttcagataggg
gtttacaaatctcacaaacacacgaacaagaaagaggacggaaacgcagaagaacacacc
tttaatatctcagtgcagctcgtcaatgatcagaggcctgtcagggttgtggataaagtt
ttccacgtggcacgggagggccagaggttggtgacgttaaatgaccttcgttatcgtgat
gatgactcagattttgaggacagctggttggtgtacacacggagggggatccccatggga
gagttggtgctggccggtgatcctagccacaagttgtatgagttcacacagcgtgacctt
gaacagaaaaaggtgctgtttgtccacagaggagtgagttttgggcgttttgtgcttttc
gtatccgacgggaagcattatgtttcaacgctgttggaggtgatggcgcaggatccttac
ctgcaggtggagaacaacacaggcctcatggtccagcagggtgggatcacgaccctgacc
tctgctaacctcagtgttttcagcaaccttgacatcagagacccacaggaagtgacgttt
gaggtcttcctcccacctaaacatggcgtgatctgctttattgatagagagagcgggatt
atcacagatgcagatgcaatttcaatattcacccagcgagacttgatagcagggcgcctg
gcgtatcgccatgatggcagccacaagttgtcggatagcttcaatgtgacggcaagagct
agagaaaggagtacagagaggcagctggaaagagggaagagggaggtgcatctagacatt
ggagtttcggtaaagatttatctggagagtcatcagaggccaccaacagtcagaaacaac
cggccagtggtggtggaagagggacagaatatctctataagcagggacaacttagaggtg
gtccatgaagacagtcagccctcagagatagtttttactgtgcacagtcttcccaaggtt
ggcatcattcagaggttgtccactgacaacaagcatcaacgcatgaatggaggacagaac
tataaaggtaacaaaaagcagtcaacacccacattcacccaggaggacctgaaccagggc
ttggttatctatcaacaacagactgcaggaagcaccaatgattctgttctgttggaagca
accaatggggtgacaaaggttggacccatcaggctggagattgatatcatcccaatcctg
cttcctctgcaggtgtccaacttgatcctagatgaggggtcttctctgccgctgacctct
gacatcattaaagtcgccagccatcacttctctgggatgaacttcctgtaccaggtcatc
aatccaccacgacatggacatttggagcacagccgcattccagggatgcccatcactgct
ttcacacacaccgaggtggaacgagagtacatttcctacatccacgatggcagtgacacc
ctgagagacaacttcaccattgtggcaaaccagacagaaaccaggaaacacagcctgccg
tgcaccgtccacatcaacatcacacctgtcaatgatgagaccccggtggttacaaccaac
cacggactgaaggtgtgggtgggttctgttacagagataaccacaggcgatctcagtgcg
gaggacattgacactccacctgaggggctggagttcatagtgacaccacccagcaatggc
cacttggctttgaagagctccccctccagacacattctgaacttcacccaaagtcacata
gaaggcaagcagctggtgtttgtgcacaatggggcgccgtcgggtggctttcatttccaa
gtgaatgacggcgtcaactttgctcctcgtcagatctttagcacaactgcccattctctg
atcctcaccctgcagagaaaccacccgatggaagtctacccaggctctgtgacaccaatc
tcagacaaggagcttcaggtggtaaccaacattgctgacggcgacatcaggaggaaccag
tccgtggtctttgcagtgacctctcctcctaaactcggccgcctggtccgacgtatgccg
gacaactccactggaaatgtttccacctttacacagagcatgttggatgatggcgttatc
ctgtatgatcagaacaagccagagtcagtgggatggtcggctgcagacactttttctttc
acggtgtctttgcctcctgcttttcttcctccacacaccttcaccatcttgatctcctac
caagccaatgaacatcatgacagccctcagcacaagaccagactactaaacaatgcaggt
gctgtggtggctgaaggaggcagggtgacaatagacaggtccaagcttgatgcctctaat
ctcctgggaaaaatcccagagtcccgtcggaaagaccaccacatcatgtatcgcgtgatt
tcttttcctcgctacgggattttgtctattcgaggacacaatctcaccaggaaccaacca
gatttttcgcaagtcaccctgaacaagtttggcatcatatacttccacgatgactctgag
accacaagtgacagcttcactttccgagcctgggtggcacctttggatctcccctcctct
tcctcctcatcatccctgtctgctttttcctctgactcctcctcttcttccagctccttt
tcctctctgtactctgcttcatcatctgccttttcatcactagacacagtttctcatcat
cacgttaaagacaccacgggggtgacagagatgttcaacatcacagtaacaccagtcaat
gaccagccaccactgatcagaagcagggcccccagtatgaaggtggtagtgggggagaga
gtcgtacttggacccgacagtcttcaggtggaggaccatgatactcctccagaggagctg
cactacctcgtgataagtaagcccaacaatggctacctgacgctgggggaaagaccggag
ccggtgacgtcattcacccagtacgacgtcaaccacggccggctgcattttatacagcag
ggcgactcctcaacaggagttttctacttcaacgtaacagatggccatcaccgtccactc
tacaagctgtttagtttggaggtgattaagccctcggtgtccattgtgaacaacactggc
ctgtcgttgattcagggccggaccgcggtggtcctgacacccaatcagcttgcagctcaa
accaatggtcagagccgggccactgtctcctacactgtgaccacaccccctcgccacgga
cgcatcgctattaacgaccaggaggtcaccacattccgccacgaggacctccagtttgga
cgggtcgtctatcacatgactgatctcagcgagtccgaggacacctttcaaatgtcagtg
tcagcctcgtctcctggggttaattatggaaatgtgacagcgacggtgaaagtgaccgtg
cggcctctgatctacctgagagagccagttcgagtccccagtggtatcgctgtgaaactg
gggaaagccatgattgatgcctccgagctggcgagaatcagccgagccaacccggtcttt
gaggttctctctccaccaaaacatggaaaactagtcaagataacatatgatcctaacaga
gcgtcagaggtcctgaagtcattcacattcagagatgtggtgcaaggccgagttgccatc
gaagagaatctcagtgacagcgacaaccagctccacaataatgaatccacgctcacaaca
gctcaagtccacgcacccgccacacctcttaatgactctttcagcttcctggtgaggtct
ggaaacgtccagccagcaaagggcgagcttcacttcaccatcttacctcatcaccagatg
cgccacggtcctggtggtttcaataaaatagacaggataggtcgcgaacacacaacagcc
cgtctaccagcacacaacaggacaactgccggaggaggaggaggaggacagggaggtgga
cgaggaggatctacggcacacggtgaggtcactgtgggtttgcacccccacattttgtca
cacaagcaccacaacaggacacatcacaagttgaggcctcataatcgactggggaaccac
acacggaatgggagtcatggagggaggtcaaagagcagcatagagggagcaggaggaggt
cacagccatgccccccagccccacactccttccatcccagagaaacacggtccagagaac
cctcctgacacccagctgattcatgtcgaggttctgcctcgtcctgcttcggaccccctc
ctcattatcctcccactgctagcttgtttgctcctcattataatactcatagttttgatc
ttggtgttccgccatcgcaaggaaaaacaagctcgacttcgtcttgtccaggagctcgct
gcagtgccggtacccactgaggacagcccgtatctgggcaggccagagcggagtgtggct
atgccctcagttatggtcaccccactcggctctgcaagctgcccaacttctccaagggta
cccacaagtccccggaggagtctggcccctggaatgaccttctgggggccatttgaggct
gatttagctggtggtgatgggaatattagaggctgtaacagtaatgaaagagataataca
acttctagcaatccgcttccacgtactgcaggattcaggacctctgtgagatctaggtcc
ccgactccgactctaaaagagagccagtactgggtttga
DBGET
integrated database retrieval system
