Oreochromis niloticus (Nile tilapia): 102076380
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Entry
102076380 CDS
T06104
Symbol
taf1c
Name
(RefSeq) TATA box-binding protein-associated factor RNA polymerase I subunit C
KO
K15214
TATA box-binding protein-associated factor RNA polymerase I subunit C
Organism
onl
Oreochromis niloticus (Nile tilapia)
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
onl03021
]
102076380 (taf1c)
Transcription machinery [BR:
onl03021
]
Eukaryotic type
RNA polymerase I system
Basal transcription factors
SL1/TIF-1B
102076380 (taf1c)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF1C_beta-prop
TAF1C_HB
Motif
Other DBs
NCBI-GeneID:
102076380
NCBI-ProteinID:
XP_005470556
Ensembl:
ENSONIG00000024316
UniProt:
A0A669BMT8
LinkDB
All DBs
Position
LG7:33311244..33320252
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AA seq
1076 aa
AA seq
DB search
MDYQFPQELFPSFYNCGPPNLVQKHNAGGWGSYDRVKPQVGSGPLSTWTFTSRHQVRGEL
WRQVEPVPVPLLAPKHTILSPLTPPDPMNFTEHMNNFFIDHSLDAFGCMSNILSEHFSFK
LKGQKEKYFKDAVRMGRVTYFLDLLKVKMCEQKYPCQKLARHSCQLYDVVHSIPPELLGS
LLYDELAEQRDHLLFSERTTGGALSFVPFSQSDGGSRRGCLLYPGNPALNTLNFHKVELQ
HNRGGPFCVDTSSKPFSFPLRGAVRQISTASLFGECCVAVRSDYLCGVWRFSERNEPQAL
QVVSTSEVATCISASPHVLGEVLVASESGAANLWTVGKGMQKVRFEDSNLYFNAKSPWRW
CEFTAHPRVVLYADRTGVDLTDIRVSPASCHTLFRISSTAECRSGERLVLSRYLGDSHSF
HHLITTQYSAYIMDERFPCVPMIKWDHMMTSPPIFCHIVPGCASSGLSADEATTKVLLSS
HSSQEMMMLQYAGGRGDACFSRGPPQALLRPRDSLKHLPVQIPHRLDVATNRLSSYVAGL
TCIQKAAEGGGGGEECMCVLQLTEAGDIFYQILEHEQLDADESQPQAEEGGLKPRQQIRP
GPTTRARKTAESLPPDSQMIISETSSDEDVVGPTQCPSRIVPETPERGRQASSSSEDSES
EMNRNRRRLQLQVVVNDHSGAEEEIGFDVDVNDKAVEVAETVSGASQRKTPAKLSSGALV
TWKHWLQKLMHKTYENKPRSHLLQHFRANTQGLLCIPEGDQGTSRQDHGVQSLRKELRLG
MSRRSLLVHSMVSTSLRPPHVVPLPNQFNTNVWTDPLSHRLTLSWQGEDAWRKWWKDQLG
FTKEAKVQALRRKRRKEKAAKQATGRRLNLSASFTSSVSYQSALDDLSDSAGWSSGVSQG
AWSDTEDRGRLSQFLSMLDDETSRAATPSTVLNDTPTATPTPTPTATPQRDKLGDPSRTT
TLPQTQTLGLDSTPASQRRSKRPADDYLKSLFAPQDDPSQSHYLDEGSSTNPFLASSQLP
SSQSIPLRNYSVNLTRMNFGSPGSSQSKSQTYSQSQSSQGRLSQASQPKKKSRMGF
NT seq
3231 nt
NT seq
+upstream
nt +downstream
nt
atggattaccagttcccccaggagctttttccatcgttttataactgcgggccgccgaat
ttggtgcagaaacacaatgctggaggctggggcagctacgaccgggtcaaacctcaggtt
ggttctggtcctctctccacctggactttcacatccaggcatcaggtcagaggggagctg
tggcgtcaagtcgagcctgtgccggtccccctcctggctcctaaacacactattctttca
cctttgacgcctccggatccgatgaacttcacggagcatatgaataatttcttcatagat
cactccctggacgcctttggctgcatgagcaacattctgtccgaacacttctcctttaag
ttaaaagggcaaaaagagaaatattttaaggatgcagtgaggatggggagggtgacctac
ttcctggatttgctgaaggttaaaatgtgcgagcagaagtatccctgccagaagctggcc
cggcacagctgccagctgtatgatgtggtgcactccatccctccagagctgctcggctca
ctgctgtacgatgagctggcggagcagagggaccacctgctgttctctgaaagaaccaca
gggggtgctctgagtttcgttcccttttcacagagtgatggtggctctcggcgtggctgc
ctcctctatcctggaaaccctgcactgaataccctcaactttcacaaggtggagctgcag
cacaacagaggcggtcctttctgtgtggataccagcagcaaaccgttcagcttcccgctc
agaggcgccgtcagacagatcagcaccgcctcgctgttcggcgaatgttgtgtcgctgtg
cggtcagattacctctgtggtgtttggaggttcagtgagagaaatgagccgcaggcactc
caggtggtcagcacgtcggaggtcgcgacctgtatcagtgccagtcctcatgttttaggt
gaagttttggtggcgagcgagagcggagctgcaaacctgtggactgtggggaaagggatg
cagaaggtccgattcgaggacagcaacctgtacttcaacgctaagtctccatggagatgg
tgcgagttcacggcccacccgagggtggtgctgtacgcggacaggacgggggtggaccta
acagacatcagggtgagtccggcctcctgccacactctgtttcgtatcagcagcaccgct
gagtgtcggagtggagagagactcgtcctgtccaggtatctaggagactcccactccttc
caccacctcatcaccactcagtactcggcctacatcatggacgagcgcttcccgtgcgtc
ccaatgatcaagtgggatcacatgatgacgtctccacctattttttgtcacattgttcct
ggctgcgcctcctcagggttgtcagctgacgaagcaaccactaaggtcctgctcagctcc
cacagttctcaggaaatgatgatgctgcagtatgcaggaggcagaggggacgcctgtttc
agtcgaggtcctcctcaggctctgctcaggcccagagacagtctgaaacatctcccagtc
cagatccctcaccgcttggacgtcgcaaccaacagactgtcctcatatgtcgcaggtctc
acttgcatccagaaggcagcagaaggtggaggtggtggtgaggagtgcatgtgcgtcctc
cagctgacggaggcaggagatatattctatcagatcctggagcacgagcagctggacgca
gacgagtcacaacctcaagcagaggagggtggcctcaagcctcggcaacaaattcgtccg
gggccgacaacaagggcaaggaaaaccgctgagagccttccacctgattctcagatgatc
atctcggagacatcgagtgacgaggacgtcgttgggcccacacagtgtccatcgaggatt
gtacccgaaacaccagaaagaggacggcaagcatccagctcctctgaagattcagagtca
gagatgaaccgaaaccgaaggcggttgcagctgcaggttgttgtcaacgatcattcaggg
gcggaggaagaaattggatttgacgtcgatgtgaatgataaagctgttgaagtggcggaa
actgtcagtggtgcatctcagagaaagactccagcaaagctgagtagtggtgctcttgtc
acatggaaacattggctccagaaactgatgcacaaaacctatgaaaataagccccgctca
cacctcttgcagcatttcagagccaacactcaaggtctgctttgtattcctgaaggcgat
caaggcacttcacggcaggatcacggtgtgcaaagtctgaggaaggagctgaggttgggc
atgtccagacggtcgctcctggttcacagcatggtctccacctctctgaggcctccacat
gtagtacccttaccaaaccagtttaacacgaatgtctggacagatccactcagtcaccga
ctgaccctctcctggcagggtgaggatgcatggcggaagtggtggaaggaccagctgggc
ttcaccaaggaggcgaaggtgcaggctctgaggaggaagaggaggaaagaaaaggcggca
aagcaagccactggacgtcgattgaatctgagcgctagctttacctcatctgtcagctac
cagtcggcgctcgatgacctctctgactcagcagggtggtcctctggagtcagccagggg
gcatggtcagacacggaggacagagggaggctgtcccagttcttaagtatgttggacgat
gagacttcgagggctgcgacgccttccaccgttctaaatgacactccaacagcaactcca
actcccaccccgaccgccacaccccaacgtgataaacttggtgaccccagcaggaccacc
acccttcctcagacccagacactaggactggactccacaccagccagtcagaggaggagc
aaacgaccagcagacgactacctcaaatctctgttcgcgccacaggatgatccttcgcag
agccattacttggatgaggggagctccacaaatccattcttggcctcttctcagctcccc
agctcccagtccatccctctccgaaattacagtgtgaatttgaccagaatgaactttggc
tcgccgggctcctctcagtccaagtctcagacctactctcagtcccagagttcacagggt
cggctgtcacaggcatcgcaaccaaagaagaagtctcgaatgggattttga
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