Oreochromis niloticus (Nile tilapia): 102077067
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Entry
102077067 CDS
T06104
Symbol
lg12h9orf84
Name
(RefSeq) protein shortage in chiasmata 1 ortholog isoform X1
KO
K28108
shortage in chiasmata 1
Organism
onl
Oreochromis niloticus (Nile tilapia)
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
onl03036
]
102077067 (lg12h9orf84)
Chromosome and associated proteins [BR:
onl03036
]
Eukaryotic type
Meiosis-specific proteins
Others
102077067 (lg12h9orf84)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF5587
YqgQ-like
TED_complement
Motif
Other DBs
NCBI-GeneID:
102077067
NCBI-ProteinID:
XP_005473645
Ensembl:
ENSONIG00000026196
UniProt:
A0A669EFQ5
LinkDB
All DBs
Position
LG12:complement(28814159..28827389)
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AA seq
1452 aa
AA seq
DB search
MSEKDNSPQTEVFPAIRYKALDYVFEATTSLKVMLNLLALPTPYLTGASDLYPHSGKLLE
DTYRKPWVRGQVISTCRLNVGGSVLDNLREKNPPVNSTERFDVKDEVEVIPSSNPDSLQD
LDEDLYVSLLKDSQTDGPCQESFLKQTPDEITDKSEDLLLSEELIPVDHLPEFKRHLPTL
RVMLFRLRMLPVADPLLSSLGNPISEDNMFSCFKHCASYEKLAVVDTTNVQTCADIQEEF
VKEPLTNGELLLLPAVVETLQLSTEKFTRFSSICSRVSVSTELMDEEVPVLDVLQKASLS
NPSVDISKFNVPDEAGEETKMNGGLIESDFAGCAVLPTEMELELTLTPTPLKSQTDISLS
TSELKKEELSPCCRISLVSPRAQKEMKAALWKAEKHLNFVVGFVLSEPQMYEPAVDFQPL
WEALKVIKLEKESFISAADKLQSEMETGVPQLSSCCCCDFTESVKSDLPSITEETGEDFS
KLPPEHVEVDSFLLSTTAETLLQKKTTVDSSPNASQMPAFNTVNKDVKPAAVTSTRYDIG
GKKFSEVASCSSAHKKGIGRQGHDCQMELGANISKEAVASTLNTRDDDRGLLFARNPPEL
DLDPLATFMMLRSQQIAPVSASPQSSGSTAAHEVNQQALLSELQPSPVQNQTLDVRPGNS
AREEEPANQWTGQLSGKSQQRQDSQVVKIKPTDSQQRAYCELLAFAQPCLSSARQLGLNF
PGCGDFSSLAPDQTHFLLKQQERALCGAPAQTAELIKDQEALFNLAALIHVLVTFKELLL
KCDLSTGLEYLTKAPKACAEQSLQQLLKRLHIILYLSQKNQESNLKLQELQHLVAEWLNS
SKGQNTKDKILVIISVHCDSSRSTIINSLNQVTGATAVCPEQDKIKLNGASVVSSMHDSV
CVVVYEQDIGPDFPWTCFSLVMEYDHPGQSPWSAICRERSISHLTFNTSVSDAENISWCL
EDNVPYVLFVTEGLINCPLLLQTLESEFNVTVLERSHCPSLQRLGGIHNYTVITVDESTT
IVIQEQDELCQERASERVVMRLTALSLQYSCCWLILHCPEGQGGRFSSEAFSNLVLVYSS
LVLLRMKSEDLDVKVLIVSDVLEIAKSISQICFHSLMSSDRDPVRFLNRDWLTVMPSQEE
KCLSQFPCINPLVAQLMLSRVPSFEWLLGASLCQLKELLPEVPHKVLKLFSDTTSLYPLA
PDPKGPQTITTGTNQQSSPQTHTGDYECMKSPHPDLLCSNQNTSFLFESPQESFYPTFED
GNSDFKLDLSDTFGSSDVCFQGSWTSNDPWREDGKISGWRSIAGAVGRVVERSVDGWTHK
TPLNDCTISLHPADNPLKLDSTFSYSTSLQQPASPQTSTYPTLYKDFNPPSQHVTSSLST
PTGILWGHDHVGGEMASLSANYGSRYWTGQERKRSREAAGLIGSVLSPSKKGRLSYERVP
GRSDGQTRLKLF
NT seq
4359 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaaaaggacaactctccccagactgaagtcttccctgctatcagatataaagct
cttgactatgtttttgaggccaccaccagtctgaaagtcatgctgaacctgctggctctg
ccaacaccttacctgacaggtgccagtgacctgtatccacatagtggaaagctgcttgaa
gacacctacaggaaaccgtgggtcagaggacaggtgatctccacttgcagacttaatgtc
ggtggctctgtccttgataatctgagagaaaaaaatccaccagtaaattcaacagaaaga
tttgatgtgaaagatgaggtggaggtgatacccagctctaatcctgactcacttcaggat
ttagatgaagatttgtatgtttcccttttaaaagactcacagactgacggtccatgtcag
gaatcgtttttaaagcagacacctgatgagatcacagataagagtgaagacctcctcttg
tcagaagagctcattccagtcgatcacctgcccgagtttaagagacatttgcctacactg
agagtcatgttgttcagattgaggatgcttcctgtagctgacccgctgctgagttcattg
ggaaatcccatctcagaagacaacatgttcagctgtttcaagcactgtgcatcttatgaa
aaactggcagttgtggacaccactaatgttcagacatgcgcagacattcaagaggagttt
gttaaagagccactcacaaacggagagttgctgctgttgcctgctgtagtggagactctt
cagctgagcacagaaaagttcacaaggttttcaagcatctgcagtcgtgtgagtgtctcc
actgagctgatggatgaggaggttccagtcctagatgtgcttcaaaaagcttccctttca
aatccttcagtggatatttccaagtttaatgtaccagatgaagccggtgaagaaaccaag
atgaatggaggtctgattgagtcagattttgcaggatgtgcggtgcttcccaccgaaatg
gagctggagttgactctcaccccgactcccctgaagagtcaaactgacatcagtctgtcc
acctctgagctcaagaaggaagagctgtctccttgttgcagaatatctttggtgtcgccg
agagctcagaaagagatgaaggcggcactttggaaggcagagaagcacctgaactttgtg
gtgggctttgtgttgtcagagcctcaaatgtatgagccagctgttgacttccagcctctg
tgggaagccttaaaagttatcaaactagagaaagaaagtttcataagcgctgctgacaaa
ctgcagtccgagatggagacgggagtcccgcagttatcttcgtgctgctgctgcgacttc
acagagagtgtgaagtctgatcttccctccatcacagaggaaactggggaagacttcagt
aaactgccacctgaacatgtggaggtcgactcctttctattgagcaccacagctgaaact
cttctccaaaagaaaaccactgttgattcatctccgaatgcctcccagatgcctgcattc
aacacagtgaataaagatgtaaaaccagctgctgtcaccagcaccagatatgatattggt
ggcaagaagttttctgaagttgcaagctgctcttcagctcataaaaaaggcatcggcaga
caaggacacgactgtcagatggagctgggtgcgaacatttctaaggaggctgtcgcctcc
acactgaatactagagatgatgacagaggtttgctgtttgcaagaaatccaccagagctg
gaccttgaccccctggccaccttcatgatgcttaggtctcagcagatcgctcctgtttct
gcatcacctcagagctcaggcagcactgcagcacatgaggtgaaccagcaagcactattg
tcagagctgcagccttctccagtgcagaatcaaacactggacgtgaggccaggaaattcg
gccagagaggaagaacctgctaatcagtggacgggtcaactcagtggaaaatcacagcaa
agacaggacagccaagtagttaagatcaaacctacagacagccagcagcgagcctactgt
gagctgctggccttcgctcagccttgtctgagctctgccagacagctggggctcaacttc
ccagggtgtggagacttcagcagcctggcaccagaccaaactcacttccttctcaaacaa
caggagagggcgctctgcggggcccctgcacagactgcagaactgatcaaagatcaggaa
gcgcttttcaaccttgcagctctgatccatgtgctggtgacatttaaggagctgctgctg
aagtgcgacctcagtacgggtttggagtacctgacaaaggcacctaaggcatgtgcagag
cagagtctgcagcagctgctgaagaggctacacatcatcctctacctcagtcagaaaaac
caggagtccaacctcaaactgcaggagctccagcacctggtggctgagtggctgaacagc
agtaaaggacagaacaccaaagataaaattcttgtgatcatatcagttcactgtgatagc
agcagatcaacaataatcaacagcttgaaccaggttacaggtgcaactgcagtttgtcca
gagcaggacaagataaagctcaatggtgcaagtgtagtcagcagcatgcatgatagcgtg
tgcgtggtggtgtatgaacaggatattggccccgacttcccctggacctgtttctctcta
gtcatggagtacgaccatccgggccagtctccatggtctgcaatctgtagggagaggagc
atcagccacctaacgttcaacaccagcgtctctgatgcagagaatatctcgtggtgcctg
gaggacaacgtcccatatgtgttatttgtgacggagggacttattaactgtccgctgcta
ctgcaaacactcgagtcagagtttaatgtgacggtgctcgagaggagccattgtccctcg
ctgcagaggctcggagggatccacaattacactgtcatcacagtggacgaaagcaccacc
atcgtcattcaggagcaggatgaactatgtcaagagcgagccagtgagagagtggtgatg
aggctgactgctctctctcttcagtacagctgctgctggctcatccttcattgtccagaa
ggtcagggaggaagattttccagtgaagccttcagcaacttggtgctagtctattcatct
ctggtgctattgagaatgaagtctgaggatctggatgtaaaggtgctgattgtgtcagat
gtattggaaatagcaaagtccatcagtcagatctgcttccacagcctgatgtccagtgac
agagaccctgtcaggttcctgaacagagactggctgactgtgatgccctcacaggaagaa
aagtgtttgtcacagttcccttgcattaaccccctggttgcacagctgatgttgagcaga
gtgccatcctttgagtggctcctgggggcttcactgtgtcagctgaaggagctgcttcct
gaggtgccacataaagtgctaaagctcttcagtgacacgacctccctgtatccactggca
ccagatccaaaaggccctcagactattaccactgggacaaaccaacaaagcagcccacag
actcacactggggattatgaatgcatgaagtccccccatccagaccttctctgtagcaac
cagaacaccagcttcctgttcgagagtccacaggagagcttctacccaacattcgaggat
ggcaactcggatttcaaacttgacctgagtgatacttttggcagttcagatgtttgtttc
cagggaagctggaccagcaatgatccatggagagaggatgggaagatctctggatggagg
agcatagctggagcagtggggagggttgttgaaagatcagtcgatgggtggacacacaag
actccgctaaacgattgcaccatttctttacaccctgctgacaacccactcaaactggac
tccaccttcagttacagtacctccctgcagcagccagccagcccccaaacgtccacatac
cctacactctacaaggactttaatcctcccagtcagcacgtcacctccagtcttagcaca
cctacaggtatcctgtggggtcatgatcacgttggtggagagatggcatcactttcagcc
aactatggctccagatactggacaggacaggagaggaagaggagcagagaagctgcaggc
ttgattggatcagtgttgtcaccatcgaagaagggaaggctgagctatgagagagtgccc
gggagaagtgatggacagacgaggcttaaattgttttag
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integrated database retrieval system
