Oreochromis niloticus (Nile tilapia): 102077653
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Entry
102077653 CDS
T06104
Name
(RefSeq) protocadherin-20 isoform X1
KO
K16498
protocadherin delta 1
Organism
onl
Oreochromis niloticus (Nile tilapia)
Pathway
onl03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
102077653
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
onl01009
]
102077653
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
onl04515
]
102077653
Protein phosphatases and associated proteins [BR:
onl01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
102077653
Cell adhesion molecules [BR:
onl04515
]
Cadherins
Protocadherins
102077653
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_CELSR2_9th
Motif
Other DBs
NCBI-GeneID:
102077653
NCBI-ProteinID:
XP_005467947
Ensembl:
ENSONIG00000017834
UniProt:
I3KMY8
LinkDB
All DBs
Position
LG2:complement(27764513..27767799)
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AA seq
858 aa
AA seq
DB search
MGHGTPDNMNWAGLLQKLLIVVHIRQIICSSLQFSVPEEMEPDTLVGSLSKNFSPPYQLL
THNYLRMDINKGNFYTTELKMDREAICPAETKAEECVTLYNAIVGPSKELIQFSVIIEDI
NDNAPHFENNKIHLGVPEDTTVGTSFLLDTQALDSDSGPNGEVQYHLKGSDGAFGLKIEE
DSSLIMLVVQRALDRETRDLFQMQLVATDCGVDPLSVSAALIVTMTDVNDNCPAFSSDSP
HSVTIPGDSQKNTVVTQVRATDPDLGPNGDIVYSFSPKVSERAKKLFSLDSLTGSISLTQ
DLESDNSEELVLKVLASGHHCPPADTQVTISVLPKANQELTIKIRFIAEHQNQTMVLQEN
QHPTALAVLELEGDSSFKDLFLAIEGEVPFTLSPQNGKYLLSTSKPLDYEMNREHHISVI
ARVKSAEGSVIVPSRRVVTVLVADINDNAPYFVQPHYELQVEENNQPGMSLLQISASDAD
SGDNGLVTYRLENYNPTMFSIDSVTGQLSLLVPLDREQQHVHRLTVFARDSGSPPLESMA
TVSIHVRDQNDNAPVFLTPHFIFFIPENVPTLSQVGRVEVKDPDKGENGTTELHVVNSSA
PFVVDNTQGMLRTTRNLDRETEDRYELYLLASDHGQTVALTSTARVTIFVEDINDNQPKV
ILPSTNSSCLTVSPGTLAGATVGKIYAIDEDSGLNSEITYSATAPEPLQNSSPFQIDSRS
GNITLSQQLLHEDLGMHHLFIVVRDGGKPVPLYTTVWMNLLVNDSTEPCHLDQVPTWTGT
LNLVQTPSKAPICDVETARFSQLMLLIGLGMMLVSTCLFVATVICCLKQRSRSLKMNKGA
YTEANEIPLKLKDKYYSD
NT seq
2577 nt
NT seq
+upstream
nt +downstream
nt
atgggccatgggactcctgataatatgaattgggccggactactgcagaagctgctgatt
gtggttcacatcaggcagatcatatgtagttctctccagttttccgtcccagaggaaatg
gagcctgacactctggttggatcacttagtaaaaacttttctcctccatatcagctcctg
acccacaattacctgaggatggacataaacaaggggaatttctacaccactgagttaaag
atggatcgcgaggccatctgccccgcagagacaaaagctgaggaatgtgttactttatac
aatgccatcgtggggccctcaaaagaacttatacagttttctgtgatcatagaggacatc
aatgacaatgcaccgcattttgaaaataacaaaatacacctgggggtccccgaggatacg
accgtggggaccagtttcctgctagatactcaggctctggacagtgacagtggtcctaat
ggagaggtgcagtaccacctaaaaggctctgatggagctttcggtttaaaaatcgaagaa
gacagctctttaattatgttggttgtacaaagagccctggatagggaaactcgggacctg
tttcaaatgcagctagtggccacagactgtggtgtagaccctttaagtgtgtctgcagct
ttaatagtcacaatgacagatgtcaacgacaactgtccagcctttagctctgatagccca
cacagtgtcaccatcccaggagactcccagaagaacacggtggtcactcaggtcagagcc
acagatccagatttaggcccaaatggtgatatcgtttactccttcagtcccaaagtctct
gagcgggccaagaagctctttagcctcgacagcctcaccgggtccatcagccttacacag
gacctcgagagcgacaactcagaggagctggtgttgaaagtgctagccagcggccatcac
tgccccccagcagacactcaggtaaccatatccgtgctccccaaggcgaaccaagagctg
acgatcaagatcaggttcatagcagagcatcaaaaccagactatggtgttacaagagaac
cagcaccccaccgccttagccgttttagagcttgagggtgacagcagctttaaagactta
tttcttgccattgaaggtgaagtgcctttcactttgagcccacagaatggcaagtatctg
ctttccacatcaaagcccttagactatgagatgaatcgtgaacatcatatttccgtgata
gcacgcgtgaaatcagctgagggatctgtcatcgttccttctagacgtgtagtcacggtg
ctggtggcagacatcaacgacaatgcgccatattttgtacagcctcactacgagctccaa
gtggaagaaaacaatcagccaggaatgtcactgcttcagatctcggcttcagatgcagac
agcggggacaacggcctagtgacctacaggcttgaaaactacaatccaaccatgtttagc
attgactctgtaacaggtcaactgtctctgctggttcctctggacagggagcaacagcat
gtacacagactcactgtgtttgctcgggacagcggttctcctcccttggaatccatggcc
actgtatccattcacgttcgtgaccagaatgacaatgcacctgtttttctcacccctcac
ttcatctttttcattcctgagaatgttccaacattatcccaggtggggagggtggaggtg
aaagacccagataaaggggagaatgggacaacagaattgcatgttgtaaacagcagtgca
ccttttgttgtggataacacccaggggatgctacgcaccactaggaacttggaccgcgag
acagaagaccgctatgaactctacctgctggccagtgatcatggccagacagttgctttg
acttccactgccagagtgaccatctttgtggaagacatcaatgacaaccagccaaaagtg
atccttcccagcaccaactcctcatgcctgactgtctctccaggtaccctggcaggtgcc
acggtaggaaagatctatgccatcgatgaggactctggactgaattcagagattacttac
tcagccacggcaccggagcctttgcaaaacagcagtccctttcagatagattcaaggtca
gggaacatcaccttaagccagcagctccttcatgaagacctgggaatgcatcacctgttc
attgtggtcagagatgggggtaaaccagttccactttataccactgtctggatgaatttg
ttggtcaatgacagcacagagccttgccacttggaccaggttcccacgtggacagggaca
ctaaacttggttcaaaccccttcaaaggccccgatctgtgacgtggagacagccagattt
tcacaactgatgctgttaataggcctgggtatgatgctggtgtccacatgtttgtttgtg
gccacagttatttgctgcctaaaacagaggagtagaagtctgaaaatgaacaagggagca
tacactgaggcgaatgagattccactcaagctcaaagacaaatattactctgattaa
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