Oreochromis niloticus (Nile tilapia): 102078384
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Entry
102078384 CDS
T06104
Name
(RefSeq) retinitis pigmentosa 1-like 1 protein
KO
K19538
retinitis pigmentosa 1
Organism
onl
Oreochromis niloticus (Nile tilapia)
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
onl03037
]
102078384
04812 Cytoskeleton proteins [BR:
onl04812
]
102078384
Cilium and associated proteins [BR:
onl03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
102078384
Cytoskeleton proteins [BR:
onl04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule-associated proteins (MAPs)
102078384
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
102078384
NCBI-ProteinID:
XP_005460370
LinkDB
All DBs
Position
LG15:8599871..8608005
Genome browser
AA seq
2296 aa
AA seq
DB search
MSVKSNISHITERSNKSHATDITEDIDEVTDVSTEEHVAEDVVRADSAISAGSAKSHGST
RSTKSKGTFPGEGSADEKSTKATTSCTSANKENVERAQSSMSAKSSGSRRSTKGSRASAG
NPAEEHAEEETEERSPSSMSAKLNKSNVSVSSRSSTTCEISSECNNANDLETVQRSLSSL
SAKSARSTKSLQSNISSKTAKSKPSVGKESHEENVEKETTGASNISTENCLNDTDENTAE
DTENRAMTSMSAESNATSVSTKTRASQKSGKLKVLEQVADKADPAQRSPSVLSVKSNTSA
RTKKSNISGTAPTETAGHEEEADDSAMSTKLVSSTKSNKLQGPEITTTNSSGHPNEENTE
EISERAQSAVSAKSKRSAKSTKSDILNKSDVPIVTVGENENRVPTAMSTKSKASSSSKKS
KTSEISGKKSATAADVSSERTSVSPLNSEVMKPKEKSRSTLHESSSHSTTIKSSKQNKEN
PASKSKSGSHSAVSETSQRAKQQKENEPHVLSHTESNESDLSQTLSSSDIIKEICESPAH
SQSKRNVPNRINGDLNTKESGGSVTDKKTDKSSKYLHKSTEAHDFDLVPSSLPNASPTEV
VNEWLKTLPAEGELDDVEEFNENHDGPKTNPATEEINRVDTVNNPTENSKGPVEGEAKKC
VPNNDCETSKETTKEDNASTDADNASTVFNSSIQVMKVLLNPKLDRCNSLPEISPAYGRK
LSSSARGFLDCLVKLQLIDRDPKNANEKNERYQELMGILQSLWLCDPPENEHALRKDDHH
FADDDFNHTSSSGVDVNSGSTGSGNSSDGIKRGNDVNGDVSQTHATVDMFMKVQQVCEVE
TDADVQSTSVRKAEGMCEDKQKEVYPASTDSLREQSETPHSSNKSSRNFSEGQKLPEAET
DSSENSNSESPLLIEREELAKMISQDDPAWVLTLLNKIEKQFMTHYIKAMNEFKARWNLG
DNEQLDSMINELRAEVHKRIQVSIDRELWKIQTQKGQPRPPRETKSSVSTTQAEERRRKL
KVNLKPSTDSHAEKSDDSATGTSYSDQRSENDDECCQCETCIKKKKTCRAPLQGDSMTTV
PAATAIKCVSHPGNIHETQAAETLVEKVIVKALREVGEVHPGTEDISTFAADDMHQDAVH
EDVSEKNEAKEHAAKEMPEKTVAEENKEENDANDIGEVRKQKDDKSFESFVASATKLEYD
KGGAKNEWLTAKNIILPSMQLIMQKMSANEKDATADELLHEPTESGKIVQIVSTNGEEFA
EAIRSNDEVPKQEDTVYYNKPALIKHIVVTSEDDPKEDTVETILTSDTKHEPEEEAAKKE
WLTVKNTLLPSMQMIMQMRIRKDQLMKADGSDATADEPLNGPTEEAESEDTEDSSEEKSK
EDVAEGTMVQDEDTHVAGATAEQNPMPKESKSGRFKVKKRVHMMQEEVVNEDLTIVDEFV
KEEEEAGCKGKLPAENEIAGLSEDESGEESAEATTTENETTAVETTTEAASEHESGTDEV
WEEKVLPEEEKMSTISEDESVDESIDDESTEEPGDPATTEDETAAEKEIGLTGKAESKYE
NAEDEIANKDTVMVASTDHESEGEEAVESLKVDDGEETDATSEDDSDSEDLNATTNEEDE
ENDVTSNDLSNEPSEIATTEDEFLVERETAATSEHELTEGTYEASTAEDENVPVESSMVA
TSEHESEEDEAVEKGTVTDEEKIPAISAEESEAENDDTNKSSEEPDGVASAEDKAAAREE
ISSAGKGDSKDETAVEETDNEEAVKAEDADNREEMGAVTENDSGEDLDATTNEDETTEED
DTTEPAEETTEDERVIETEIAVSTENEPNRAAADENVEETTSDNEAEDNSAAEEPDNTAT
TEHDSDTAVAVDTASASESESEDEASEAKESAVTSEDDLKKAVVEATQEEAAEDVTDAAE
HEFNKDTSSDESDVKETDEKLSEDEIAEQKEIAATSEDEMAEEADETSDESDKTESSEKI
GESSANEECKEDEKGEDNSKKLVEGETTGDESEEPGKEEVESGENELTCEDCTEALTTEG
ETEKHETTEEDSGQPEAGENETDESDSREESGAEGTSAGEEAEETQTGKVESTDDTEDES
EQDEGQNAVSESETNANKPESGCQESDVTCQEDTNDADDVVELKPGEDEDVEEKSETKEE
IRENNPEDDVTQCINIPDGSTDASEKEDEETETPNEDWSEKEGDSADGEDEAEEDSDEPE
EESGDIQLPLVTSKIDNQDVANVVPKNALKPLDTLIKETAESEDGTYADIEDSEPEINSQ
DDIKSLETKSVKKKLF
NT seq
6891 nt
NT seq
+upstream
nt +downstream
nt
atgtcagtcaaatcaaatatttcccatattacagaaagatccaataagtcacatgccact
gatattactgaagacattgatgaagtcacagatgtatctactgaagagcatgtggcagaa
gatgtagtgagagcagatagtgccatttcagccggatctgcaaagtcacatggctcaaca
cgatctacgaaatcaaaaggcacatttccaggtgaaggaagtgctgacgaaaaaagcaca
aaggccacaacaagttgtacatcagctaacaaagaaaatgtagagcgagcacaaagttct
atgtcagcaaagtcaagtggttcaaggagatctacaaaaggatctcgagcttctgctgga
aatccggctgaggaacatgctgaagaagaaactgaggagaggtcaccaagcagcatgtcg
gccaaattaaacaaatcaaatgtttctgtgtcatcaaggagctcgacaacatgtgaaata
tcttcagaatgcaacaatgccaatgatttggagactgtacagagatctctaagctccttg
tcagcaaaatcagcccgatccaccaaatcactgcaatccaacatttcttcaaaaactgct
aagtcaaaaccctctgtaggcaaagaaagtcatgaagagaacgtggagaaagaaacaact
ggagcctccaatatatctactgaaaattgtttaaatgacactgatgaaaatacagcagaa
gacacagagaacagagcaatgacctcaatgtctgccgagtcaaatgcaacatcagtatct
acaaaaacaagagcctctcaaaaatcagggaaattaaaagtgctggagcaggtagctgat
aaggcagatccagcacagaggagtccaagtgttttatcagtgaagtcaaacacctcagca
agaaccaaaaaatcaaatatatctggaacagcccccactgaaacggctggacatgaagaa
gaagctgatgacagtgccatgtcaaccaaattggttagttcaacaaagtcaaataaatta
caaggtccagaaatcactactacaaacagttctggccatcccaatgaagagaatactgaa
gagatatctgagagagcacagagtgctgtgtcagcaaaatcaaaaaggtcagcaaaatca
acaaaatctgacatattaaacaaatcagatgtccccatcgtgactgttggggaaaatgaa
aacagagtgcctacagccatgtcaaccaagtccaaggcttcatcttcttcaaaaaagtca
aaaacatctgagatcagtggaaagaaaagtgcaacagctgcagatgtctcctctgagcgg
accagtgtttctccactaaattcagaagtaatgaagccaaaggaaaagagccgatctact
ttgcacgaaagcagtagtcactctacaacaatcaagtcaagtaaacagaacaaagaaaat
ccagcttccaaatcaaagtctggaagtcattcagcagtgtcagaaacaagtcagagagca
aagcagcagaaagaaaatgaaccacatgtcttatctcacacagagtcaaatgaaagtgac
ttgtcacaaactctgtctagttcagatatcatcaaagagatctgtgagtctccagcacac
agtcaatcaaaacgtaatgttcctaacaggataaatggtgacctgaatactaaggaaagc
ggtggaagtgtcactgacaagaaaactgacaaaagcagcaaatatctgcacaagagcacc
gaagctcatgattttgacctggtcccatctagcctacccaacgcatcccctactgaggtt
gtaaatgaatggctgaaaacactgccagcagagggtgaattagatgacgtagaggaattt
aatgaaaaccacgatggaccaaaaactaaccccgcaacagaagaaattaacagagtggat
actgttaacaacccaactgagaattcaaaaggcccagtagaaggagaggcaaagaaatgt
gttcctaataatgactgtgaaacaagcaaagaaacaacaaaggaagataacgcctctact
gacgcagacaatgcctcaacagtatttaactcttccatacaagtgatgaaagtcctttta
aatccaaagctagacagatgcaacagtttaccagaaatttctccagcttatggacgtaag
ctgagctcctcagctagaggttttttggattgccttgtgaagctgcagctaatagaccgt
gatccaaaaaatgccaatgaaaaaaatgaaaggtatcaagaacttatgggtattcttcag
tccctttggctttgtgatcctcctgaaaatgaacatgcattacggaaagatgatcaccat
tttgcagatgatgatttcaatcatacgtcatcctctggcgtggatgtcaacagtggctcc
acaggctccgggaacagtagtgatggtataaagaggggcaatgacgtgaatggtgatgtt
tctcagactcacgccactgtggatatgtttatgaaggtacaacaggtgtgtgaagttgaa
acagatgcagatgttcagagcacatcagtaagaaaggcagaaggaatgtgtgaagataag
caaaaggaagtctatccagcaagcactgatagtctaagagaacaatctgaaacaccacat
tcctcaaacaagagttcaagaaatttcagcgagggccaaaaactcccagaagctgaaacc
gattcttcagagaacagcaactctgagagccctctcctcatagaaagagaagagctagct
aaaatgatttcacaagatgatcctgcttgggtcttaaccttattaaataagattgaaaaa
cagttcatgactcattatatcaaagcgatgaatgagttcaaagctcgatggaacctggga
gataatgagcagcttgacagtatgattaatgaacttagagctgaggttcacaaaagaatc
caagtaagtattgacagggaactgtggaaaattcaaactcaaaaaggccaaccaagacct
ccaagagagacaaaatccagtgtttcaacgacacaagcagaagagagaagacggaaactg
aaggtcaacctcaaaccatcgactgattcacatgcagaaaaaagcgatgattcagcaaca
gggacgtcttacagtgaccagcgcagtgaaaacgacgatgaatgctgtcaatgcgaaacg
tgcattaagaaaaaaaagacgtgtagggcacctcttcagggagattcgatgacaactgta
cctgctgccacggcaatcaagtgtgtatctcaccctggaaatattcatgaaacacaagcg
gcagaaacccttgtggaaaaagttattgttaaagctttaagggaagtgggagaagtacat
ccgggcactgaagatatctctacatttgcagcagatgatatgcatcaagatgcagttcat
gaagatgtttctgaaaagaatgaagcaaaagaacatgctgccaaagaaatgcctgaaaaa
actgttgctgaagaaaataaggaggagaatgatgccaatgacataggtgaagtacgaaaa
caaaaagatgataagtcatttgagtcatttgtggcatcagcaactaaactggaatatgac
aaaggaggagcaaagaatgaatggttgacagcaaagaacataatactgccatcaatgcag
ttgatcatgcagaagatgagtgctaatgaaaaggatgccacagctgatgaattgttacat
gaaccaacagaatcagggaaaattgtgcaaattgtatccacaaatggagaagaatttgct
gaagctatcaggtcaaatgatgaagtcccaaaacaagaagatactgtatattataataag
cctgctctaataaaacatattgtggttacgagtgaagatgaccctaaggaagacacagta
gagactattctgacatctgatactaagcatgaacctgaggaagaagcagcaaagaaggaa
tggttaacggtaaagaatacgttgctgccatcaatgcagatgatcatgcaaatgagaatt
cggaaagaccagctgatgaaagcagatggaagtgatgcaacagctgatgaaccgctaaat
ggaccgacagaagaagctgaaagtgaagacactgaagactcaagtgaagagaagtctaag
gaagatgttgctgaaggtaccatggttcaagatgaagacacacatgtcgcaggagcaaca
gctgagcaaaatccaatgccaaaagaaagtaaatcagggaggtttaaggtaaagaagaga
gtgcatatgatgcaggaggaagtggtgaatgaagatttaactatagttgatgaatttgta
aaagaagaagaagaagcagggtgtaaaggtaaacttcctgcagaaaatgagattgctggc
ttgagtgaagatgagtcaggtgaggagtctgctgaagctactactactgaaaatgaaact
acagcagtagaaaccaccacagaagctgcaagtgagcatgaatcggggacagatgaggtc
tgggaagaaaaagtactccctgaagaagagaaaatgtctaccattagtgaagacgagtct
gtggatgaaagcattgatgacgaatctacagaagaaccaggtgacccagcaacaactgag
gatgagacagctgcagaaaaggagattggtctcacaggaaaagctgaatcaaagtatgaa
aatgctgaagatgaaattgcaaacaaagatactgttatggtagcctcaactgatcatgaa
tctgagggtgaggaagctgtggaatcactgaaggttgatgatggagaagagactgatgct
accagtgaagatgactctgactctgaagatttaaatgccaccacaaatgaagaagacgag
gaaaatgatgtcacaagtaacgatctgtcaaatgaaccatctgaaatagcaacaactgaa
gatgagttccttgtagaaagagagaccgctgctacaagtgagcatgaacttacggaaggc
acttacgaagcatccacagctgaagatgaaaatgtacctgtggagagcagcatggtggcc
acaagtgagcatgaatctgaggaagatgaggctgtggaaaaaggaacagtcactgatgaa
gagaagattcctgctatcagtgcagaggagtcagaggctgaaaacgatgacacgaacaaa
tcgtcagaagaaccagatggagtagcatcagctgaagacaaggcagctgcaagggaagag
atttcttcagcaggaaaaggtgactcaaaggatgaaactgcagtggaagaaactgacaat
gaggaagctgtgaaagcagaggatgctgacaatagagaagagatgggtgctgtcactgaa
aatgattcaggagaagatctagatgccaccacaaatgaagatgagacaaccgaggaggat
gacaccacagaaccagctgaagaaacaaccgaagatgaacgcgtgatcgaaacagagatt
gctgtttcaaccgagaatgaacctaacagagctgctgctgatgaaaacgtggaagaaacc
acaagtgacaatgaagctgaagataatagtgcagcagaagagcctgataatactgcaaca
actgaacatgactcagacacagcagtggctgtggacaccgccagtgcaagtgaatctgag
tcagaagatgaggcttctgaagcaaaagagagtgctgtcacaagtgaagatgacctgaag
aaagctgttgttgaggccactcaggaagaggcagcagaagatgtgacagatgccgccgag
cacgaatttaacaaagacaccagttcagatgagtcagatgtgaaggaaacggatgaaaaa
ctgagtgaagatgagattgctgagcaaaaggaaattgctgccacaagcgaagatgaaatg
gcagaggaagcagatgaaacaagtgatgagtcagacaagacagagtcgtctgaaaaaatc
ggagaaagcagcgctaatgaagaatgtaaagaagacgaaaaaggtgaagataacagtaag
aagctagtagaaggtgaaacaactggagatgaatctgaagaacctggaaaggaagaggtg
gaatctggtgaaaatgaattgacttgtgaagattgcacagaggctttaacaacagagggc
gagactgaaaagcatgaaaccacagaggaagactcaggacagcctgaagcaggagagaat
gaaactgatgaaagtgacagcagggaagaatctggagcagaaggtacatctgcaggagag
gaggctgaagaaactcaaacgggaaaggtggaatctacagatgatacggaagatgaatcc
gagcaagatgaaggacagaatgctgtcagtgaatcagagactaatgccaacaaaccagag
agtggatgccaagaaagtgatgtcacttgtcaagaagatactaatgatgctgatgatgta
gtggagcttaaaccaggagaggatgaggacgtggaggaaaaatcagaaaccaaagaagaa
atcagagaaaacaacccagaggatgatgttacacaatgtattaacatcccagatggaagt
accgacgcttctgaaaaggaggatgaggaaaccgagacacccaatgaagactggagtgaa
aaagagggagattcagctgatggagaagacgaagcagaggaagactcagatgaaccagag
gaagaaagtggtgacatacagcttcctttggttaccagcaagatagacaatcaagatgta
gctaatgtagtacctaagaacgcgctaaagccacttgatactttgatcaaagagaccgca
gaatctgaggacggcacttacgctgacattgaagattcagagcctgaaataaacagccaa
gatgacattaaaagccttgagacaaagagtgtgaaaaagaagttgttttga
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integrated database retrieval system
