Oreochromis niloticus (Nile tilapia): 102078649
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Entry
102078649 CDS
T06104
Symbol
fancc
Name
(RefSeq) Fanconi anemia group C protein
KO
K10890
fanconi anemia group C protein
Organism
onl
Oreochromis niloticus (Nile tilapia)
Pathway
onl03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
102078649 (fancc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
onl03400
]
102078649 (fancc)
DNA repair and recombination proteins [BR:
onl03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
FA core complex
102078649 (fancc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fanconi_C
Motif
Other DBs
NCBI-GeneID:
102078649
NCBI-ProteinID:
XP_005452188
Ensembl:
ENSONIG00000015128
UniProt:
I3KD44
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Position
LG12:complement(22816954..22850905)
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AA seq
583 aa
AA seq
DB search
MSEQQPLSQPLQTEEPLLNDQEMQFWLDKAVAWGQADSPDTQKDTCLHMSRLRDFLQQLL
TQVNSMSSTTETMKRLPFLGQLLGRLCWNPYVTVCDTSRGLLLGCLWELYSERPSNAVEQ
KANQWIRKVLCQLSTEEDDTAAQALMKCTGVPAKEYHLKVLRKKVALLQENVGQSCTLFN
SQRCSCDRIVAISEACIPIVACPEASSLISLLLQRPVACVTEVLSEDFLDALTSAYSRQG
LALEEQALVSLWYHSFSSLEEAVLSLLQSVITTGLTPQKLEQQVAQSLLPKACAQHCSVF
LVVNDIFRSVLKQAEVNEFVKALVQTFTKCFLKELALLKPQTSISVKAFFPQSPSSLLVP
LLTMPSEMPQGAWRNHLNWLSSSLQRLTEEEEEGDGDGRSTRGHHNVFEAWFLLVQCAHW
VQVAVQLLVTSGTEDGDPFLWLLIFYHYPTNRWHHRASQLARAKEAWNHIRTLFSGAAHP
LPSDRLQSLVTLVSPQPEQQSLAPSLTVSLLVNVAVFCQLPPSGSAEVLQAVVDQSGLLD
EAACVLSSLELRLNEGSCLSRDTVHLRIKELQKTITQMHSDGT
NT seq
1752 nt
NT seq
+upstream
nt +downstream
nt
atgtctgagcagcagccactgagccagcccctgcaaactgaagagccattgctgaatgac
caggagatgcagttctggctggacaaagcagtggcatggggccaggctgacagtccggac
acgcagaaagacacctgcctacatatgagcagactcagggatttcctccagcagcttctc
acacaagtgaacagcatgagctcaacaacagaaaccatgaagaggctgcccttcttaggc
cagcttttgggccggctgtgctggaatccttatgtcactgtgtgtgatacaagcagaggg
ctgctgcttgggtgtctttgggaactgtactcagagcgtccaagcaatgctgtggagcaa
aaagccaaccagtggatacggaaagtgttgtgtcagctttccacagaagaagatgacact
gcagcacaagcgttaatgaagtgtacgggtgtaccagctaaagagtaccaccttaaagtc
ctgagaaagaaggtggcgctgctgcaggaaaatgttggacaaagctgcacattatttaac
agtcagaggtgttcatgtgacaggattgtggctatatcagaggcatgcatccccattgtc
gcttgtcccgaggcatcttctctcattagtctattgctacagcggccggtggcttgtgtc
acagaagttctcagtgaagactttctggatgctttgacctctgcttactcaaggcagggt
ttggcattggaggagcaggccttggtatctctgtggtatcacagcttctccagcctggaa
gaagcagtcctcagtctgttgcagtctgttataactacagggttaacaccacagaagcta
gagcaacaagtagcacagtcactgctgcctaaagcttgtgctcagcactgctcagtattc
ttggttgtaaatgacatctttaggtccgtccttaagcaagctgaagtaaatgagtttgtt
aaggctctggtccaaacctttaccaagtgtttcctgaaggaactggcgctgctgaagcct
cagacaagcatatctgtgaaagccttcttcccacagtcgccttcaagtctgctggttccc
ctcttgacgatgccatcagagatgcctcagggggcttggagaaatcacctgaactggctg
agcagctcattacagagactgacagaggaggaagaggagggagacggagacggcagaagc
accagggggcaccacaacgtgtttgaggcctggttcctgctggttcagtgtgcccactgg
gtacaggtggctgtccagctgctggtcacatctgggactgaagatggtgatcccttccta
tggctgttgatattctaccactaccccaccaacaggtggcaccacagagcttcacagctg
gcacgggccaaagaagcttggaaccacatacgcactcttttctcgggcgcagctcatcct
cttcccagcgaccgcctgcagtcactggtcacgctggtttcaccacaacctgagcagcaa
tcacttgctccatcattgactgtcagccttttggttaatgttgctgttttctgccagcta
ccaccaagtggctcagcagaggttttacaggcggtggtggatcagtctggtctgcttgat
gaagcagcatgtgttctcagctcactggagctcagactaaacgaaggaagctgtttatca
agagacacagttcatctaaggatcaaggaacttcaaaagacgataacgcaaatgcattca
gatgggacataa
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