Oreochromis niloticus (Nile tilapia): 102079432
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Entry
102079432 CDS
T06104
Name
(RefSeq) ATP-binding cassette sub-family A member 1 isoform X1
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
onl
Oreochromis niloticus (Nile tilapia)
Pathway
onl02010
ABC transporters
onl04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
102079432
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
102079432
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
onl02000
]
102079432
Transporters [BR:
onl02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
102079432
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
DUF4162
AAA_23
Motif
Other DBs
NCBI-GeneID:
102079432
NCBI-ProteinID:
XP_019201797
Ensembl:
ENSONIG00000027392
LinkDB
All DBs
Position
LG15:complement(32640003..32667022)
Genome browser
AA seq
2373 aa
AA seq
DB search
MGFFRQLFLLLWKNITYRRRNKIQLIIELLWPLFLFVILISVRHSHPPYKQSQCHFPNKA
LPSAGTLPWIQGIICNINNPCFHSQTPGETPGQVGNFNNSILSRLLVDVQAVLAYSGNQS
FAGFQKLMESVRKLGQRNGALPNLPVKQYLRPNETFSTFLLTNASMSPVTVDTLLNARLN
FQTTLAVAEMQLKDMVCNRSVLEQLLTVDGGEAAMTDLQTQMCDLPADVLQETERLFLSQ
LDLTKFFTRDRLMANAGELRVISQAVTSVSQELTALLDDISSLSSFADMSAALRVLSPEN
RTAMPRESFRAFSKIVCGHHELDGERIPSLNWYEDNDIKSFLGKNGTEDVNVEHNNNTTP
FCKNLIQALESNPLSRIVWRGIKPLFIGKLLYTPNTPAVQEVMKEVNKTFEDLQIIQELN
EAWLEVGPQIKSYMETSVEVKMLQDLLRQPEIAVLVNLRLEDTPWTASRIARFLSTPSPD
IPRRPGAPLTWLDIYNDINQTISTLAQVTECFSLNKLEGLETEGQLIERALELLEDRQFW
AGVVFLLPNTSSSELPPHVTYKIRMDIDDVTRTNKLKDRFWDPGPAADPFSDMRYIWGGF
VYVQDLVERAVSRVLTGVRQTTGIYVQQMPYPCYVDDVFLRVLNRSLPLFMTLAWIYSVA
MIIKGVVYEKEARLKETMRIMGLGTGTLWFSWFISSIVPFLVSAALLIALLKWGDILPYS
NPAVIFFFLTAFATATIMQCFLISTFFSKANLSAACGGLIYFGLYLPYVLCVAWRDHLNS
THRILASFLSPVAFGFGCEYFSQYEEQGVGIQWYNLHSSPVEGDRYSFTVSIVMLYVDAF
IYAIAAWYIEAVFPGEYGIPRPWYFIFQLNYWGGVPLEAGMPIPPAPTEQNEDHIEPEPS
NMILGVSIRNLVKIYKKGGKLAVNHLNLKFYEGQITSFLGHNGAGKTTTISVLTGLFPPT
SGTVYIKGMDIRHDMDLIRRTLGVCPQHNVLFDMLTVEEHVWFYGCMKGLSEAEVKAELD
TLLEDVGLLHKRHEQTKNLSGGMQRKLSVAIAFVGGSKVVVLDEPTAGVDPYSRRGIWDL
LLKYRKDRTIILSTHYMDEAELLGDRIAIISQGKLCCCGSPLFLKSQLGSGYYLTVVKRE
GLDTSTPSNFSISTSASSNKLPPLIKDSDSSLSEDTGLGSEDSSSYLAALLSLVQHHIPG
ARLVQESRREAVINLPQTAAKDSSLAILLIALDQRLTELGISSYGLSDSTLEEIFLRVAE
ETGVDTEAEVQPESPHSQQPSGQGTDGHPLDEAETGRKKPHRKAEPQETDLLNGDGHGGV
PATGWWLTWQQLRALFIKRWLYARRSRRGIFAQIVLPAVFVLIALLFSLIVPPFGKYPAL
QLHPWMYGEQYTFFSNDDPGNPAMENLLEALLDQPGFGTKCMEKEDNMTDPQCEAGRGGL
FMRPQLSYSTWDMFSRGNWSRDRPSPECQCSTEDVYRMLPECPEGAGGLPPPQIKRPTGD
ILQNLTSYNISDYLVKTYSQILKKSLKTKKWVNEFRYGGFSFGGRAVSQTQYLQDSVMAI
RTRFRVPQNSSLGNLLHRLPEVLGGLNSENNVKVWYNNKGWHAMVSFVNVMNNGLLRASL
PPGPERRKHGITAYNHPLNLTKEQLTEVAMMTTSVDVLVSICVIFAMSFVPASFVLFLIE
ERVSKAKHLQFVSGVKPILYWLANFTWDMLNYTIPAIMVVLIFISFQQQSYVSETNLPAL
ILLLLFYGWSITPLMYPASFVFTVPSTAYVFLTSINLFIGINGSIATFVLELFVDEYLNE
VNRILKKVFLIFPHFCLGRGLIDMAKNQAMVDAFKRLGTKPSLDPLQWDFVGKNLFAMAV
EGVVFFIFTILLQYKFFIRYRPWWTKPELPPLGPEDEDVARERERVKSGKAHSDILTMID
LSKVYKAGRKPAVDRLCLGIPRSECFGLLGVNGAGKTSTFRMLTGDTPVTHGEAFLSQHS
VLTEMEQVHQLMGYCPQFDAISDLLTGREHLELYARLRGVPEEFVSKVAQWGVKKLGLTQ
YADQEAGGYSGGNKRKLSTAISLIGSPPVIFLDEPTTGMDPKAKRFLWNCILSVTKEGRA
VVLTSHSMEECEALCTRMAIMVNGRFRCLGSVQHLKNRFGNGYTIILRLADTKSDPDSCP
VSAYMKECFPNIELKERHQNVLQYQLPSHACCLARVFDVLANNYEELDIVDFSISQTTLD
QVFVNFAKDQTDDDCLTDVVVSNGTVQPNAPEHRVNPPINKPQPPIVPPQPSKSPHLPGK
SSDSKAKAGKPKKEKSSKGKSGSAAMRAIPQPEEMAREVANVSRRASTESDGSNSGVQGE
SGKSRGSKRRAESSSKDPSVLFIVGGNSEESTL
NT seq
7122 nt
NT seq
+upstream
nt +downstream
nt
atggggtttttcagacaactgttcctcctgctctggaagaacatcacgtaccgcagaagg
aacaagatccagctgattatcgagctcctctggccgctcttcctcttcgtcatccttatc
tctgtccgtcattcgcaccctccttacaaacagagccaatgtcactttccaaacaaagcg
ctgccatcagcagggaccttgccctggattcagggcattatctgcaacatcaacaaccct
tgcttccacagccagacaccaggggagacacccggccaagtcggcaactttaacaactcc
atactgtctcggcttctagtggacgtccaggccgttctggcctacagtggtaatcagagc
ttcgccggctttcagaagctaatggagagcgtccggaagctgggacaaagaaatggagct
ctgccaaatctcccagtaaaacaatacctgagacccaatgagacattttccaccttcctc
ctgaccaatgccagcatgtcacctgtgactgtggacacgctgctaaatgctagacttaat
tttcagactacactggctgtagcggagatgcagctaaaggacatggtgtgtaataggagc
gtcctagaacagctgctgacggtggacggaggagaagccgccatgactgatcttcagacc
cagatgtgtgacttaccagctgatgtgctgcaggagactgagcgccttttcctgtctcag
ctcgacttgaccaagttcttcacgagagaccgtctaatggccaacgctggagaactcagg
gtcatcagtcaggctgtcacctcagtttcccaggagctcactgccctcctggatgatatc
tcctccctctccagttttgcagacatgagcgcggctcttcgtgtcctgtctccagaaaat
cgtacagcgatgcccagagaaagtttcagagctttttcgaagatcgtgtgcggtcaccat
gaacttgacggtgaacgcatcccgtcccttaactggtatgaagacaatgacatcaagtcc
tttttgggcaaaaatggcacagaggacgtgaatgtggaacacaacaacaatacaactccc
ttctgtaaaaatctgatccaggcactggagtccaaccctctgtctcgcattgtgtggcga
ggaatcaaacctttgttcataggaaaactcctctacacacccaacactcccgcagtccag
gaagttatgaaagaggtgaacaaaacatttgaagacctgcagattatccaggagctaaat
gaagcctggcttgaggtgggaccacaaatcaagagctacatggagaccagtgtggaggtt
aagatgctacaggatttgttaaggcagccagagattgcagtactggttaacctgcgtttg
gaagacacgccctggacagcttcacgcatcgcacgcttcctgtcgacaccctctccagat
atcccacggaggcctggcgcaccgctgacctggctggacatctacaatgacataaaccaa
actatctccactcttgcacaagtcacagagtgcttctctctgaacaaactggaggggctg
gaaactgagggtcagctgattgaaagagcgctggagctactagaggacaggcagttctgg
gcaggtgtggttttcctgctgcccaacacttcctcgtctgagctgcccccacatgtcacc
tacaagatccgaatggacattgatgatgtaacccgcaccaacaagctcaaagaccggttt
tgggatccgggtccagctgctgaccccttcagtgacatgcgttatatttggggtggtttc
gtgtatgttcaagacctggtggagagagcggtgagccgagtgctcaccggagttcgacag
actaccggcatctacgtccagcagatgccatacccctgctatgtggacgatgtttttctt
cgagtgctgaaccgctctctgccgctcttcatgacactggcgtggatctactctgtggcc
atgatcatcaaaggtgtggtgtacgagaaggaggcgaggctgaaggaaaccatgaggatc
atgggtctaggaactgggacactttggttcagctggttcatcagcagcatagtgccattc
ctggtttctgcagcactgctcatcgctctgctcaagtggggcgacatcttgccgtacagc
aacccagccgttatttttttcttcctcacagcttttgccactgccaccatcatgcaatgt
ttcctcatcagcaccttcttttcaaaggccaacctgtcagctgcctgcgggggactcatc
tacttcggactctacctgccttatgtcctgtgtgtcgcctggagagaccacctcaacagc
acacaccgaatcttagctagtttcctttctcctgtagcctttggctttggctgcgagtat
ttctctcagtatgaagagcaaggcgtgggcattcagtggtacaacctgcactccagccct
gtggaaggagaccgatacagcttcactgtctccatagttatgctgtatgtggatgccttc
atctatgccatcgctgcctggtacatcgaagcagtgtttcctggtgagtatgggatcccc
aggccatggtacttcatctttcagctcaactactggggaggtgttccccttgaagcaggc
atgccgatcccccctgcacctacagaacagaatgaagatcacattgaaccagaacccagt
aacatgattctgggcgtaagcatcagaaatctggtgaaaatctacaagaagggggggaaa
ctggccgtaaaccacctgaacctgaagttctatgaggggcagatcacttctttcctgggc
cacaatggagccggcaaaaccaccaccatatctgtcctgaccggtctgttcccacccacc
tctgggaccgtgtacatcaaagggatggacatccgccatgacatggacctcatcaggagg
acgctgggagtttgtccccagcacaatgtcctgtttgacatgctgacggtagaggagcat
gtgtggttttatggctgtatgaagggtttgtccgaagcagaggtgaaggcggagctggac
actttgctggaggatgtcggcctcctgcacaagcgacacgaacagaccaaaaacctctca
ggcggcatgcagaggaagctgtctgtggcgatagcgtttgtcggaggctcaaaggtggtc
gtcctggatgaacctacagctggggttgacccgtactcccgcagagggatctgggacctg
ctgctcaaataccgcaaagaccggaccatcatcctgtccacccactacatggacgaggca
gagttgttaggtgaccggatcgccatcatctctcaggggaagctgtgctgctgtggctca
ccgctcttccttaaatcccagctggggtctggctactacctcactgtggtgaagagggaa
ggactggacaccagcactcccagtaatttcagtatttccaccagtgccagctccaacaag
ctccctcctctcatcaaggacagcgactcatcactgagtgaagacaccgggctgggaagt
gaggatagcagctcatatttggcagctttgctgtcactggttcaacaccacatccctggt
gccagactggtgcaggagtctagacgtgaggcggtgatcaacctgccacagacggccgcc
aaagacagcagcctggccatcctactgatcgcactggaccagagactgactgaactggga
atcagcagctacgggctgtcagacagcacgctggaggagatctttctgcgggtggcagag
gagacaggtgtggacactgaagcagaggtgcagcctgaatcaccccacagccagcagccg
tcaggacagggaactgatggccatcctctagacgaagcagaaacaggaaggaaaaagcct
catagaaaagcagaacctcaggagacagacctgctgaatggcgatggccacggtggggtg
cctgcaaccggctggtggctgacatggcagcagctgagagcgctcttcatcaaacgctgg
ctttacgctcggaggagccgtcggggaatctttgcccagatcgttctccctgctgtattt
gtgctgatcgccctgctcttcagccttattgttcctccttttgggaagtaccctgccctg
cagttgcatccctggatgtacggcgagcagtacaccttcttcagcaacgatgatcctgga
aacccagcaatggagaatctgcttgaagctctccttgaccagcctggatttggtaccaag
tgcatggaaaaggaggacaacatgacggatcctcagtgtgaagctgggcggggtggttta
ttcatgaggccacagttatcttactctacctgggacatgttcagcagaggcaactggagc
agagacagaccctcacctgaatgtcagtgcagcacagaagacgtctaccgaatgctcccc
gagtgtcctgagggtgctggagggcttccgcctccacagattaaaaggccgactggagac
atcctgcaaaatctgacaagttataacatctcagattacctggtgaagacctactctcaa
atccttaagaaaagcctaaaaaccaagaagtgggtgaatgaattcagatacggaggcttc
tccttcggaggtagagctgtatctcaaacccaatatctccaagactcggtcatggccatc
aggactcgtttccgagtcccacagaacagttcactgggaaacctgctgcacagactccca
gaggtcttaggagggctgaacagtgaaaacaatgtgaaggtgtggtacaacaacaaaggc
tggcacgccatggtgtcatttgtcaatgtgatgaacaacggcctgctgagagcgagtctg
ccaccaggtcctgagaggaggaagcacggcatcactgcctacaatcacccactcaacctc
accaaggagcagctcaccgaagtagccatgatgactacatcggtggatgtcctggtttcc
atctgtgtgatctttgccatgtccttcgtgccggccagtttcgtcctttttctgatcgag
gagcgagtcagcaaagctaaacacctgcagtttgtcagcggggtcaaaccgattctctac
tggctggccaattttacttgggacatgttaaactacaccattcctgctatcatggtggtg
ctgattttcatcagtttccagcagcagtcatacgtttctgagaccaacctgcccgctctt
atcctgctcctcctgttctacgggtggtccataacccctcttatgtacccagcatccttt
gtgttcactgtcccaagcacagcttatgtatttttgacctccatcaacctcttcattgga
atcaacggcagcatcgccaccttcgtcctggagctgtttgtagatgagtatctgaacgag
gtgaacagaatcctgaagaaggtgtttttaatcttccctcatttctgtttgggacgagga
cttatcgacatggccaaaaaccaggccatggtggatgccttcaaaagactgggtaccaaa
ccaagcctggacccccttcagtgggactttgtaggaaagaacctttttgcaatggcagta
gaaggtgttgtcttcttcatctttaccatactccttcagtacaaattcttcatccgctac
aggccttggtggactaagcctgagttgcctcctcttggtccagaggatgaggatgttgcg
agagagagagagagggtcaaaagtgggaaagcacactcagacatcctcaccatgatcgac
ctgagcaaggtttataaagctggcagaaagccagccgtagaccgtctttgcctcgggatt
cctcgcagcgagtgttttgggctgcttggggtcaacggagctgggaagacttcaacattt
cggatgctgactggagatacacctgtcactcatggagaggctttcctcagccagcacagt
gtgctgacagaaatggagcaggtccaccagctgatgggttactgcccacagttcgatgcc
atcagcgacctgctcacaggtcgggaacatctggagctgtacgcccgcctgcgaggggtg
ccagaggagttcgtctctaaggtggcgcagtggggtgtgaagaagctggggcttactcag
tatgcagatcaggaggctggaggctacagcgggggcaacaagaggaaactctccacagct
atctccctcatcgggtctccacctgtcatattcctggatgagcccaccactggcatggac
ccaaaagccaaaagatttttgtggaactgcatcctcagtgtcaccaaagagggaagagct
gtagtgctaacctcacacagcatggaggagtgcgaggcactttgcaccaggatggccatc
atggtcaacggcaggtttcggtgtcttgggtctgtgcagcacctgaagaacaggttcggt
aatggatacaccatcatccttcgtttggcagacaccaaatcggaccctgactcgtgtccc
gtcagcgcctacatgaaggagtgttttcccaatattgagctgaaggagcggcaccagaat
gtgctgcagtaccagctaccgtcgcacgcctgctgccttgctcgcgtcttcgacgtgctg
gcaaacaactacgaggagctggacatcgttgatttctccatttcacagaccacgctggac
caggtgtttgtcaactttgccaaggatcagactgatgacgactgcctcacagatgtggtc
gtcagcaacgggacagtacagccaaacgcacccgagcacagagttaatcctcccatcaat
aaaccacaaccaccaatcgttcctcctcaaccaagcaaaagtccacacctgcctgggaaa
tcatctgacagcaaggcaaaggcgggtaagccgaaaaaagaaaaatctagcaaaggcaaa
tctggctctgcagcaatgcgcgcaataccacagccagaggaaatggcccgggaggtggct
aatgtgagccgcagggccagcactgaatcagacggcagtaacagcggtgttcagggagaa
tcaggtaaatctcgtgggtcgaaacgcagagcagagagttccagcaaagatccctctgtt
ctctttatagtcggcggcaactcagaggagagcacgctatga
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integrated database retrieval system
