Oreochromis niloticus (Nile tilapia): 102079645
Help
Entry
102079645 CDS
T06104
Name
(RefSeq) nectin-4 isoform X1
KO
K06081
poliovirus receptor-related protein 1
Organism
onl
Oreochromis niloticus (Nile tilapia)
Pathway
onl03266
Virion - Herpesvirus
onl04514
Cell adhesion molecule (CAM) interaction
onl04517
IgSF CAM signaling
onl04520
Adherens junction
onl05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03266 Virion - Herpesvirus
102079645
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
102079645
04517 IgSF CAM signaling
102079645
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
102079645
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
102079645
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
onl04515
]
102079645
04090 CD molecules [BR:
onl04090
]
102079645
Cell adhesion molecules [BR:
onl04515
]
Immunoglobulin superfamily
Nectin family
102079645
CD molecules [BR:
onl04090
]
Proteins
102079645
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ig_3
ig
I-set
V-set
C2-set_2
Ig_2
Ig_4
PLDc_N
Motif
Other DBs
NCBI-GeneID:
102079645
NCBI-ProteinID:
XP_025759592
LinkDB
All DBs
Position
LG16:19470296..19487635
Genome browser
AA seq
435 aa
AA seq
DB search
MEGERMREEEAADSLKTQNNASFVSHMLANITNQRSVDGWIYFFGGSYCDSMSSLLLPMV
VLQCTYVGALQVIGGSVTVIQGGTAILPCHVIDTNDDLTQISWQRKTREKPHNDNFLTIL
PREGPQFVNGGDDRFKYIGNFNEKNGTLQLANVALKDEGRYTCIFTLFPSGNQKTEIPLN
LLVPPFTNVKDNLPTLGKEEVLFATCTAAGSKPPAEVRWLTGALGDKVRTTTNSTHYDND
TTTTVSSLFGVPTREINGHQVQCVISGDSFFTEETLPFTIQVYFSPTEVNIRAISEDSFE
CVTEANPSANFTWSRSGQSLLQSAVKVEGAKLQLLSRTSDLNGLYQCEASNAYGRKHAQL
YVHVASGTCSAAWASFAVFLFLNVIGAAAWWFFKSGHFQRFFPMHGDEHSDPPSPRSPGD
GHGQDHQKLQREESA
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atggagggagagagaatgagagaagaagaggcagctgacagcttaaagacacagaataac
gccagctttgtgtcccacatgttggccaacataaccaatcaacgatcagtggatggatgg
atttacttttttggtggaagttattgcgactccatgagcagtctgctgctcccgatggtc
gtgcttcagtgcacatatgtaggagctctccaggtgattggtggaagtgtgacagtcatt
caaggaggcactgctatcctaccgtgccatgtcattgataccaatgatgacctgacacag
atttcctggcagaggaagacgagagaaaaacctcacaatgacaatttcctcactatctta
cccagagagggaccacagtttgtcaatggaggtgatgatcgatttaaatatattggaaat
tttaatgaaaaaaatggcactctccaattagccaatgttgccctgaaggatgaaggcaga
tacacgtgcatcttcaccttgtttcccagtggaaatcagaagactgagatacctctaaat
ttgcttgtgcctcctttcacaaacgtgaaggacaatcttcccactttgggcaaagaagag
gttttatttgctacctgcacggctgctggatcgaagcctcctgcagaggtgaggtggctc
actggtgctttgggagacaaagtgaggacgacaacaaactccacacattatgacaatgat
acaactaccacagtcagctcattgtttggcgtacctacgagagagattaatggtcaccag
gtccagtgtgtcatcagtggtgactccttttttacagaagaaaccctgcccttcaccata
caggtctacttctctcccacagaagtgaacattagagcaatttcagaggactcatttgag
tgtgtgacagaagccaacccaagcgcaaactttacctggagcagatctggccagtcgttg
ctgcagtctgctgtcaaagtagagggtgcaaagctacaactgctgagtcggacctctgat
ctaaatggcctctatcagtgtgaagcatctaatgcatatggaagaaaacacgctcagctg
tatgtgcatgtggcatcaggaacatgctcggctgcttgggcctcatttgcagtttttctt
ttcctgaatgtcattggggctgcagcatggtggtttttcaaatctggacattttcaaagg
tttttccccatgcatggtgatgaacacagtgacccaccatctcccaggagtccaggtgat
ggtcatggacaagatcaccaaaaactgcagagagaggaatctgcctga
DBGET
integrated database retrieval system