Oreochromis niloticus (Nile tilapia): 102080013
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Entry
102080013 CDS
T06104
Symbol
faap100
Name
(RefSeq) Fanconi anemia core complex-associated protein 100
KO
K10993
fanconi anemia core complex 100 kDa subunit
Organism
onl
Oreochromis niloticus (Nile tilapia)
Pathway
onl03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
102080013 (faap100)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
onl03400
]
102080013 (faap100)
DNA repair and recombination proteins [BR:
onl03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
FA core complex
102080013 (faap100)
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Gene cluster
GFIT
Motif
Pfam:
FANCAA
KH_KhpA-B
Motif
Other DBs
NCBI-GeneID:
102080013
NCBI-ProteinID:
XP_005448206
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Position
LG8:complement(20488491..20494431)
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AA seq
865 aa
AA seq
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MEGRCAVETWAQFGFSGGSYKVKILCGFGTDVLICTGTEEIYVFSKRERKITTVLLLPAA
VSDLVGNQDKQLIYVACRSGVYCVNLQFLLHRDQSSQADASSSPAELKISQDCLVVGADE
VSSLLLVGSVLLTLCQRDASWLLTLYKTPKQTASTSHEEFGSFHLPLVSAVDCGAAESNR
GPRKTSVLICIHSGYVEASSPSNASAESTVAQDHFHLEPLLFKLLFGVEAALAKSPVILC
GLPDGRLCFLPLRLPGSRLRVLHSLEQPVCFVGASVVTETGHARCLVAAGERGRVVLIKT
DNAGSEGGSAVAAFTEGCVPGPVWCGCMDKSCFYYSTGSDLLRLDLSEGSSARENKERGE
ETSGTTAAALQSPSSLNVCRVIALAEPACSTAGDVQLLAVSARGKLQKICLPVGRDNEGL
SKLPSTQVGRSVRDLLSAIGDVCERASVLKTVIKSKNQFLRLLNHAVSISFLLMADTNTD
LPIKEKPIRCYAETSWSRLLQKDSLNLVCFLHNSSPFVLERGWTLSITVSPLSCSSSPAG
ESSSTNSSFPFHDLCPGETFEASLPIAAAGDASFPMTVSCSLIFSLSSLLGEEEVAASFA
GLQSSCVSLPLSTLTVDWLHALQLNSPIATHKMATVQPCSAAADSIQTFLSSRQLRCSGR
TDRGGESVPKPEPEKYSASVRVSSELVRDTLKPQKSSNLDTKESMRNPEDLCLSLLERLL
SEDTEGVKMGYQGDKIALSTSVVHARGPNGAAVKLTAKEINVGEEESTDKEATIEVQIES
SSLPVVCGLHHAVLCRIQTLLQSATEKAASTKNVQILGLRRALQRAEIQQSRISGAFGEV
VSTVQRDRMLLSVYQELRQNPLLIV
NT seq
2598 nt
NT seq
+upstream
nt +downstream
nt
atggagggacggtgtgctgtcgagacttgggcacagtttgggttttcgggaggatcttat
aaagtgaagatcctctgtggtttcggaacagatgttttaatctgtactggcaccgaagag
atctacgtgttcagtaaacgtgagaggaaaatcacgactgtcctcctgttacctgctgct
gttagtgacctggttggaaaccaggacaagcagctaatctatgttgcatgcaggagtggc
gtttactgtgtaaacttacagtttctgctacacagggatcaaagctctcaagctgatgca
tcctccagtccagctgagctgaaaatctcccaagactgtctcgttgttggagcagatgaa
gtgtcatctctgctcctcgttggctctgtgctcctgaccctttgccagagagatgcctcc
tggctgctgactttgtacaaaacgccaaaacaaacagcgtccactagccacgaggagttt
ggctcattccatctgccgctggtctcagctgtggactgtggcgccgctgagtcaaataga
ggaccaagaaagacctctgtgctaatttgcatccattcgggttatgtagaggcatcatct
ccctccaatgcttctgcagagtcaactgtagctcaagaccacttccacctggagcctctc
ctcttcaaactgttatttggagttgaagctgccctcgccaaatctccagtcatcctttgc
ggcctgccagacgggcgcctgtgtttccttcctctgcgtctcccgggatcgcgccttcga
gtcctgcacagcctggagcagccggtctgttttgtcggtgcatctgttgtcacagaaacg
ggtcacgcacggtgcttggtggcggcgggcgaacgaggcagagtggtactgatcaagact
gacaatgcaggctcagaggggggaagcgctgtggctgcttttactgaggggtgtgtacca
gggcctgtgtggtgcggctgcatggataaaagctgtttttactacagcactggttcagat
ctgctccgactggatctgtcggagggatcgtctgcgagagaaaacaaagaaagaggggaa
gagacatctggcacgacagcggctgccctccagagccccagcagtttaaatgtgtgcaga
gtcatcgccctggctgagcctgcatgcagcactgcgggtgatgtacagctgctggcagtg
tctgccagagggaagctccagaagatctgcttacctgtggggagagataatgaaggattg
tctaagcttccttccacacaggtgggccgcagtgtcagggacctcctgtctgccatcggg
gatgtttgtgagagagcatcagtgctgaaaacagtcatcaaatccaaaaaccagtttctg
aggcttctgaatcatgccgtcagcatcagtttcctgctgatggcagacacaaatactgat
cttccaattaaggagaaaccaatcagatgttatgccgagactagctggagcagactgctt
cagaaagactccttaaacctcgtgtgtttcctgcataattcaagtccatttgtcctggaa
cgaggctggacgctgagcattacggtgtcccctctgtcttgttcttcctccccagcagga
gaaagctcctccactaattcttcgttcccatttcacgacctctgtccgggggaaacattc
gaagcatctctgcctatcgcagctgcaggtgatgcatccttccccatgactgtcagctgc
tcgctcatcttctcgctctcgagtcttctgggagaggaggaggtggcggcgagctttgca
ggcttgcagagcagctgtgtcagtttgcccctgtccacactgacagtggactggctgcat
gctctgcagctaaacagtcccatagctactcataagatggccacagttcagccctgcagt
gccgcagcagatagcatccagacctttttaagctcgcgccagctcaggtgcagcggtaga
acggacagaggaggagaaagtgttccaaagcctgagcctgagaagtattcagcaagcgta
cgggtgtcatcagagttagtgagggatacgctgaagccccaaaaaagttcaaatttggat
accaaagagtcgatgcgaaaccctgaagatctctgcctgtctttgcttgagcgactgttg
tctgaagatactgaaggagtgaagatgggttaccaaggagacaagattgctttgagcacc
tcagtggtccacgctcgtggtccaaacggagcagcagtgaaactgacagcaaaagagata
aatgtgggggaggaggagagcacagacaaggaggctacaatcgaggttcagatcgagagc
tcatctttaccagtggtgtgtggtctgcaccatgctgtgctgtgtcggatccagactctg
ctgcagagcgccacagagaaagccgcctctacaaagaatgtccagattttaggattaaga
cgggcgctgcagcgggccgagatccagcaaagtcggatctcaggagcctttggtgaggtc
gtgtccacagtgcagagagatcgaatgcttctcagtgtttaccaagaactcagacaaaat
cctctgctcatagtgtaa
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