Oreochromis niloticus (Nile tilapia): 102080292
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Entry
102080292 CDS
T06104
Symbol
thsd1
Name
(RefSeq) thrombospondin type-1 domain-containing protein 1
KO
K24433
thrombospondin type-1 domain-containing protein 1
Organism
onl
Oreochromis niloticus (Nile tilapia)
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
onl04990
]
102080292 (thsd1)
Domain-containing proteins not elsewhere classified [BR:
onl04990
]
Thrombospondin domain-containing proteins
Other thrombospondin domain-containing proteins
102080292 (thsd1)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
THSD1_D3
THSD1_N
THSD1_D2
TSP_1
TSP1_spondin
TSP1_ADAMTS
TSP1_CCN
TSP1_CFP_C
Motif
Other DBs
NCBI-GeneID:
102080292
NCBI-ProteinID:
XP_025766469
Ensembl:
ENSONIG00000004767
UniProt:
I3JAV8
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All DBs
Position
LG10:14717792..14724492
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AA seq
940 aa
AA seq
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MPQAVSLLSFLLVLIGYAFAGLNIWPSLHSALSNSSVFVDFSIKSNSSTIRSRSLSLVNT
ESNTTVLTKTLHNNQPAGRVEFNCSCFPYAGTFRFLLRQTSISTVFPTNSTEGSSIESTT
WWWSSELQVHWPTFHIAVERAGNHSGSFQVGISTNEHFQACSSGIDSALSLEVSYVEYNQ
IGHNSINKVRALTRIPIKPLRSQSVELSCAFPFTDRDFIRVALRSPHTAQEVKSSGPLYL
SRIFSYKLLVENANAYKSGCEGTMTVKLITPPCAHINGKVLLYSDAASSAVMGFRPEEPT
SPPLAFNWLTHGENETEFNCSVFYPGRNKYCFRFVFNYSRSPSPAQTCLVAYKSAESWGP
WQPWSVCSVSCGEGVRERVRECLLPSGVRGMQCTGMIKEQSLCSLEDCVVVPAPSPSLPP
APVGAAPLGGNMIVVVGISLCLAVIMATVVVTVWRKFCQSPQCSSVRKSSMHSPGGRKLS
DEASIFGHSLQRPSLSDVHSPSGGMGVAAAQKDGAFLGSQPLSQTMVIPLPQDPERLSPT
GQKVFPPIFGYKLAQQQLKEMKKKGLKEATQLYHVSSSPVHDTVVDTSASPTISPIPTPI
GFAHSASPLGLQGDSKLKNFHIAAPFSEPLSQTFRATPDRLSPRVELIIGPPVAAHASRS
SSKWHDRTADWVEMVERTGLTGFREEGHAAMGNSYHKNPNFRRTSSFNDAKPQLPSSAQS
RQFRERSLTQVGSRTLPEGSCWSKGEWERQPYRSYPIPEHGASEWTRSRLQKSDGRKPWT
EKPALSHINEIKHAGTNTNTISASGTQGKSDFNSTAERRKNSEQVSGIGGPAAAPVSSQG
VNQLSLDRAEQNWNRRGPSPIQRNILARKLKEAQSYSAAKGRKRSSSFTASSSEQRKGRC
HSLPVTEEYSSSDGSPYKLSEAEQKMLDLDLSSSYVWEEE
NT seq
2823 nt
NT seq
+upstream
nt +downstream
nt
atgccacaggctgtctcactgctgtccttcctgctagtgctcattggatatgcttttgca
gggctcaatatctggccctccttgcattctgccctaagcaacagcagcgtatttgtggac
ttcagcataaaatccaacagcagcaccatccggagcaggagcctatctctggtcaacacg
gaaagcaacaccactgttctgaccaagactctccacaacaatcaaccggctggcagggtg
gagttcaactgctcctgcttcccgtacgcaggaactttccggttcctgctgagacaaacc
agcatctccactgttttccctactaatagcacagagggcagtagcatagagagcactacc
tggtggtggagttcagaactacaagtccattggccaacctttcatattgccgtggagaga
gctgggaaccactcgggatcctttcaggttgggatatccactaatgaacactttcaggct
tgttccagcggcattgattctgctctctcactagaagtcagctatgtggagtacaaccaa
ataggtcataacagcatcaacaaggtccgagccctcacccgaatcccaatcaaacccctc
cgttctcagagtgttgaactgtcctgtgccttccctttcacagacagagatttcataaga
gttgctctacggtctcctcacacagcacaggaggtgaagagctctggaccgctctacctg
tcccgtatcttctcctataagttgctagtggaaaatgccaatgcttacaagagtggctgt
gaggggactatgactgttaaattgatcaccccgccctgtgctcacatcaatgggaaagta
ttactgtatagcgatgctgcctcatctgcagtgatggggttcagaccagaggagcccact
tctcccccgttggcctttaactggctgactcatggagagaatgaaactgaattcaactgc
tcagtgttttacccgggaaggaataagtactgctttcgctttgttttcaactacagccgc
tcgcccagtccagcacagacgtgtctggtggcttacaaaagtgcagagtcatgggggcca
tggcagccgtggagtgtgtgcagcgtgagctgtggagaaggggtgagggaacgagtgcgt
gagtgtttactgccctcaggtgtgcgagggatgcagtgcactggcatgatcaaggagcag
tccctgtgttcactagaggattgtgtcgtggtaccagctccttctccatctctcccacct
gcaccggttggagctgcacccttgggcggtaacatgattgtggtagttggtatctccctt
tgcctggctgtgattatggctactgttgtggtgactgtgtggagaaaattttgccagagc
cctcagtgcagctctgtgcggaaaagctccatgcattctcctggagggcgcaagctctca
gatgaggcctccatctttgggcacagcctacaaagacccagcctgtctgatgttcacagc
ccttcagggggcatgggtgtggctgcagcccaaaaagatggggctttcttgggaagtcaa
cctctctcacagaccatggtgataccactcccacaggacccagaaaggctatctcccact
ggccagaaggtgtttccaccaatatttgggtacaaattggcacaacaacagttgaaagag
atgaagaagaagggcttaaaggaggctacacagctgtaccatgtctcttcgagccccgtc
catgacactgttgtagacacatctgcttcacccaccatctctcccattcctacaccgatc
ggatttgctcattctgcctcccctttaggtctacagggtgattctaaactcaagaacttt
cacattgcagctcccttttctgaaccactatcacagacttttagggccacaccagacaga
ctgagtcctagagtggaactgatcataggtcctcctgttgctgctcacgcaagtaggagc
agctccaagtggcatgaccgcactgctgactgggtagagatggtagagaggactgggcta
acaggtttcagagaagaaggacatgcagcaatgggaaactcttatcataagaatccaaat
ttccgacggacttccagttttaatgatgccaaacctcagctaccgtcgtccgcacagtcc
agacagttcagagaaagaagcctgacccaggtgggatctcggactcttcccgaaggaagc
tgttggagcaaaggagagtgggagagacagccatatcgctcttacccaattccagagcat
ggggcttcagagtggactagatccagactccagaaaagtgacgggaggaagccctggaca
gagaaaccagcgctttcgcacattaatgaaatcaaacatgcaggaaccaacacaaacaca
atttcagcatctgggacacagggtaaatctgactttaatagcacagcagagaggagaaag
aacagtgagcaagtttcagggatcgggggtcccgccgcagcacctgttagttctcaggga
gtgaaccagttgagtttggatcgggctgaacagaactggaaccgtcgtggaccctcacca
attcagaggaacatcctggcccggaaattaaaggaggctcagtcctactctgcagccaag
gggcgcaagcgcagctccagttttactgcttcatcctcagagcagaggaaaggtcgctgc
cactctctgcccgtgactgaggagtacagcagtagcgatggctctccctacaagctgagc
gaggcagaacaaaagatgctggatctagatctgtcctcgtcatatgtatgggaggaggag
tag
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