KEGG   Oreochromis niloticus (Nile tilapia): 102081421
Entry
102081421         CDS       T06104                                 
Symbol
wdr88
Name
(RefSeq) WD repeat-containing protein 88
  KO
K24757  WD repeat-containing protein 88
Organism
onl  Oreochromis niloticus (Nile tilapia)
Brite
KEGG Orthology (KO) [BR:onl00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04990 Domain-containing proteins not elsewhere classified [BR:onl04990]
    102081421 (wdr88)
Domain-containing proteins not elsewhere classified [BR:onl04990]
 Other domain-containing proteins
  WD40 repeat (WDR) domain-containing proteins
   102081421 (wdr88)
SSDB
Motif
Pfam: WD40 WD40_Prp19 Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 WD40_WDHD1_1st Beta-prop_EML_2 EIF3I WD40_CDC20-Fz WDR55 Beta-prop_WDR75_1st Beta-prop_TEP1_C Beta-prop_WDR90_POC16_2nd Beta-prop_EIPR1 Beta-prop_SPT8 NBCH_WD40 Beta-prop_NWD2_C Beta-prop_EML WD40_MABP1-WDR62_2nd Beta-prop_DCAF4 Beta-prop_DCAF12 WD_LRWD1 Beta-prop_RIG_2nd PEP5_VPS11_N Beta-prop_SCAP ANAPC4_WD40 WDR90_beta-prop_4th zf-dskA_traR WD40_MABP1-WDR62_1st Beta-prop_WDR19_1st Beta-prop_Vps41 PQQ_2 Ge1_WD40 XPA_N Beta-prop_Nup120_160 Beta-prop_IFT122_1st Beta-prop_HPS5 Beta-prop_IFT140_1st
Other DBs
NCBI-GeneID: 102081421
NCBI-ProteinID: XP_019216962
LinkDB
Position
LG1:37896229..37906314
AA seq 395 aa
MASRNIDPLSVEEPWEGGEEEREEKGRGAGGELSWESQVPVKVLQAHRDAVTTARVCCDN
HCVLSCSSDCTAVLWDVESCQPLRTFDGVHSKAITECALIPHSNRMVTVSWDKKMVAWDL
ETGLTLWKSRQPGLLTSCSSSSDGRLVVCAVNPQNGVSICDAASGQMLHHVSDLHRSFIT
RCRFDPQSQRVATVSVDRSIKLWDLRAQKTTVSIDSLLLHQQRALPVHSVVGQDVEAVGP
AGGGFRSHGGTPLQGGHEGSVSACCLAAADADLLVSASYDRTVALWDLSSLCQTLVLKGH
SDWVTDVSVSADRKLVASSSKDGTVRLWDIENMEEIPEVMKKRNAQGAGIHILKCEECGK
PFPLSRLLTSELLTQCVFCRLKSPPRYRPQPPPLT
NT seq 1188 nt   +upstreamnt  +downstreamnt
atggcgtcaaggaacatcgaccctttgtcggtggaggagccatgggaaggcggagaagag
gagagggaggaaaaggggagaggagcaggaggagagttgagctgggagtctcaggtccca
gtgaaggtgttgcaagctcaccgcgatgctgtgaccacagctcgagtctgctgcgacaat
cactgtgtcctgagctgctcctcagactgcaccgctgtcctctgggatgtggagagctgt
cagcctctgaggacgtttgatggagttcacagtaaagccatcactgagtgtgctctgatc
ccacacagcaacaggatggtcacagtgtcctgggataagaagatggtggcctgggacctc
gagaccggactcactctgtggaaatcgaggcagcccggcctgctgacctcctgcagctcc
tcgtctgacggccggctggtcgtttgcgctgtaaatcctcagaatggcgtttccatctgc
gacgccgccagcggacagatgctgcaccacgtcagcgatcttcaccgctccttcatcact
cgatgtcggttcgaccctcagagccagcgagtggccaccgtctctgtagaccgcagcatc
aaactgtgggacctgcgggcgcagaaaaccaccgtgtccatcgacagcctgctgcttcac
cagcaacgggcacttcctgtgcacagcgtcgtgggacaagacgttgaagctgtgggacct
gcaggcggggggttccgatctcacggcgggacgccgctgcagggaggccacgaaggcagc
gtgagtgcctgctgcctcgccgctgctgacgcggacctcctggtgtccgcctcctacgac
aggactgttgctctctgggatttgtcgtctctctgtcagactctcgtgctgaagggccac
agtgactgggtgacagatgtgtcagtgagtgctgacaggaagttggtggcttcttcctcc
aaggacgggactgttcgactgtgggacatagagaacatggaagaaatcccagaggtcatg
aagaagaggaacgctcagggagcgggaattcacatcctcaagtgtgaagagtgtggaaag
ccgttcccattgtccagactgctgacctcagagctgctcacgcagtgcgtcttctgtcgc
ctcaaatcgccacccagataccgaccgcagccgccaccacttacatga

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