Oreochromis niloticus (Nile tilapia): 102081421
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Entry
102081421 CDS
T06104
Symbol
wdr88
Name
(RefSeq) WD repeat-containing protein 88
KO
K24757
WD repeat-containing protein 88
Organism
onl
Oreochromis niloticus (Nile tilapia)
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
onl04990
]
102081421 (wdr88)
Domain-containing proteins not elsewhere classified [BR:
onl04990
]
Other domain-containing proteins
WD40 repeat (WDR) domain-containing proteins
102081421 (wdr88)
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Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
WD40_WDHD1_1st
Beta-prop_EML_2
EIF3I
WD40_CDC20-Fz
WDR55
Beta-prop_WDR75_1st
Beta-prop_TEP1_C
Beta-prop_WDR90_POC16_2nd
Beta-prop_EIPR1
Beta-prop_SPT8
NBCH_WD40
Beta-prop_NWD2_C
Beta-prop_EML
WD40_MABP1-WDR62_2nd
Beta-prop_DCAF4
Beta-prop_DCAF12
WD_LRWD1
Beta-prop_RIG_2nd
PEP5_VPS11_N
Beta-prop_SCAP
ANAPC4_WD40
WDR90_beta-prop_4th
zf-dskA_traR
WD40_MABP1-WDR62_1st
Beta-prop_WDR19_1st
Beta-prop_Vps41
PQQ_2
Ge1_WD40
XPA_N
Beta-prop_Nup120_160
Beta-prop_IFT122_1st
Beta-prop_HPS5
Beta-prop_IFT140_1st
Motif
Other DBs
NCBI-GeneID:
102081421
NCBI-ProteinID:
XP_019216962
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Position
LG1:37896229..37906314
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AA seq
395 aa
AA seq
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MASRNIDPLSVEEPWEGGEEEREEKGRGAGGELSWESQVPVKVLQAHRDAVTTARVCCDN
HCVLSCSSDCTAVLWDVESCQPLRTFDGVHSKAITECALIPHSNRMVTVSWDKKMVAWDL
ETGLTLWKSRQPGLLTSCSSSSDGRLVVCAVNPQNGVSICDAASGQMLHHVSDLHRSFIT
RCRFDPQSQRVATVSVDRSIKLWDLRAQKTTVSIDSLLLHQQRALPVHSVVGQDVEAVGP
AGGGFRSHGGTPLQGGHEGSVSACCLAAADADLLVSASYDRTVALWDLSSLCQTLVLKGH
SDWVTDVSVSADRKLVASSSKDGTVRLWDIENMEEIPEVMKKRNAQGAGIHILKCEECGK
PFPLSRLLTSELLTQCVFCRLKSPPRYRPQPPPLT
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcaaggaacatcgaccctttgtcggtggaggagccatgggaaggcggagaagag
gagagggaggaaaaggggagaggagcaggaggagagttgagctgggagtctcaggtccca
gtgaaggtgttgcaagctcaccgcgatgctgtgaccacagctcgagtctgctgcgacaat
cactgtgtcctgagctgctcctcagactgcaccgctgtcctctgggatgtggagagctgt
cagcctctgaggacgtttgatggagttcacagtaaagccatcactgagtgtgctctgatc
ccacacagcaacaggatggtcacagtgtcctgggataagaagatggtggcctgggacctc
gagaccggactcactctgtggaaatcgaggcagcccggcctgctgacctcctgcagctcc
tcgtctgacggccggctggtcgtttgcgctgtaaatcctcagaatggcgtttccatctgc
gacgccgccagcggacagatgctgcaccacgtcagcgatcttcaccgctccttcatcact
cgatgtcggttcgaccctcagagccagcgagtggccaccgtctctgtagaccgcagcatc
aaactgtgggacctgcgggcgcagaaaaccaccgtgtccatcgacagcctgctgcttcac
cagcaacgggcacttcctgtgcacagcgtcgtgggacaagacgttgaagctgtgggacct
gcaggcggggggttccgatctcacggcgggacgccgctgcagggaggccacgaaggcagc
gtgagtgcctgctgcctcgccgctgctgacgcggacctcctggtgtccgcctcctacgac
aggactgttgctctctgggatttgtcgtctctctgtcagactctcgtgctgaagggccac
agtgactgggtgacagatgtgtcagtgagtgctgacaggaagttggtggcttcttcctcc
aaggacgggactgttcgactgtgggacatagagaacatggaagaaatcccagaggtcatg
aagaagaggaacgctcagggagcgggaattcacatcctcaagtgtgaagagtgtggaaag
ccgttcccattgtccagactgctgacctcagagctgctcacgcagtgcgtcttctgtcgc
ctcaaatcgccacccagataccgaccgcagccgccaccacttacatga
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