Oreochromis niloticus (Nile tilapia): 102082186
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Entry
102082186 CDS
T06104
Name
(RefSeq) zinc finger BED domain-containing protein 1
KO
K24637
zinc finger BED domain-containing protein 1 (E3 SUMO-protein ligase ZBED1) [EC:2.3.2.-]
Organism
onl
Oreochromis niloticus (Nile tilapia)
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
onl03000
]
102082186
04121 Ubiquitin system [BR:
onl04121
]
102082186
Transcription factors [BR:
onl03000
]
Eukaryotic type
Zinc finger
Cys2His2 BED
102082186
Ubiquitin system [BR:
onl04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
102082186
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dimer_Tnp_hAT
zf-BED
hAT-like_RNase-H
Motif
Other DBs
NCBI-GeneID:
102082186
NCBI-ProteinID:
XP_019202803
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All DBs
Position
LG17:complement(24341841..24345496)
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AA seq
653 aa
AA seq
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MDTRQVAVSCPDMQQAETATQPAQEEAFLPKRGGTSVIWLHFGFNSTDTEQKTPICKLCY
KTIPAPDGNTTNLFYHLQKAHEKEYSRIQKIRAKPSCGTTGAILEKKNYSQPKIQQSFAQ
GTPYEKTSQRHKQITEAISRYICKGMAPVYVVEKDSFRDLVKVLDPRYVMPGRKHFSKVE
LPRLYDACRAKVEKDVCSVMHYALTTDLWTSRDTQPYMSVTIHFINKDWTLCARCLQTAY
FPEDHTGGMLAQGLRDTLESWGLQECHLVCVTTDNATNNISAMELNQWERLQCFGHRLQL
AIENALKALTPVSTKQAVERAVGVCKKVVSTFSKSWKKKRELAKVQAVLGLPLHQLITES
PTRWGSRQMMIERFLEQEKALSQVLLADKKTRHLVPSWQDVALLESLNNALGPLFEFTDA
LSGESYVSVSFLKPVLHLFNNEILSQKDGDTELTKAVKDGILKYLNEKYDDHATNNLLDM
ATLLDPRFKTAYIKEERVEFIKMRAAAELVDMVGAIAPESAQTAAASSSPPAADDDPELP
RPTKKKKSLGSYFKKAGQSTTHSQPSRASIELELSMYLQTPGPDSETDPLEWWKQHETSF
PLLARLARKYLCIPATSSSSERAFSASGNIITCKRSCLKPNTVDQLVFLALNL
NT seq
1962 nt
NT seq
+upstream
nt +downstream
nt
atggacacgcgacaggttgcagtttcatgcccggacatgcaacaggcagagacagctaca
cagccagcccaagaagaagcatttttaccgaaaagagggggtacatctgtgatttggtta
cattttgggttcaacagcactgacacggagcagaagacgcccatttgcaagctatgctat
aaaactattcccgcgcctgatggcaacacaacaaatctcttctatcacctacagaaggcc
cacgaaaaagaatactcaagaatccagaaaatccgagctaaaccaagctgtggaacgacg
ggagcaattttagaaaagaaaaactatagccagccgaagatacagcagtctttcgcacaa
gggacgccgtatgagaaaacgtcccagcgccataaacaaatcacagaagccatctcgcgt
tacatttgtaagggcatggcccctgtttacgtagttgagaaggacagctttcgtgacctc
gtcaaagtccttgatccgaggtacgtcatgcccggtcgtaagcacttcagtaaagttgaa
ttgccacgcttatatgacgcatgccgggccaaagtagagaaggatgtttgcagtgtcatg
cattatgccttgactactgacctatggacgagcagagatacgcagccctacatgagcgta
accatccatttcatcaacaaagactggaccctctgcgctcgctgtttacagactgcgtac
tttccagaagaccacactggaggcatgttagcccaaggtctgagagatacactggagtca
tggggattgcaagaatgccaccttgtctgtgtcaccacggataacgccactaacaacatc
tctgcaatggaactgaaccagtgggaacggctacaatgctttggtcaccgcctacagcta
gccattgagaatgctctaaaagctctcacaccagtatctacaaaacaggctgtggaacga
gcagttggagtgtgtaaaaaggtggtgagtactttctccaagtcatggaagaaaaaacgt
gaattggccaaggtgcaagcagtgctgggcttgcctcttcatcagctcatcactgaaagc
cctacaagatggggctcgcggcagatgatgatagagaggttcctggagcaggagaaagct
ctttcacaggttctccttgcagacaagaagacaaggcatctggtgccaagctggcaagat
gtggcattgctagagtccttgaacaacgcactgggtccactgttcgagtttactgacgct
ttgtcaggggagagttacgtcagcgtatcttttctgaagccagttctgcacctcttcaac
aatgaaatcctcagtcagaaggatggagacacagagctcacaaaagcagtcaaagacggt
atcctcaagtacctcaatgaaaagtatgatgaccatgccaccaacaacctcctagacatg
gcaacacttcttgacccacggtttaagacagcctacatcaaggaagagagggtggagttc
ataaagatgagagctgcagcagagctggtggacatggtaggagcaatagcaccagaaagt
gcacaaacagcagcagcctccagttcacccccagctgctgacgatgatccagagcttccc
cgtcccacaaagaaaaagaaaagtttaggtagctacttcaaaaaggcaggtcaatccacc
acccactcccaacccagtagagcatccattgaactggagctctctatgtatcttcagaca
cctggacctgactcagagactgacccactggagtggtggaagcagcatgagacaagcttt
ccactgttggccaggctggccagaaagtacttgtgcattcctgctactagttcttcatct
gaaagggctttcagtgcgagtgggaacatcatcacatgtaagaggtcatgtcttaagcca
aacacagttgaccaactagtcttccttgcactcaacctgtaa
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