Oreochromis niloticus (Nile tilapia): 102082314
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Entry
102082314 CDS
T06104
Name
(RefSeq) protein NLRC3-like
KO
K22614
NLR family CARD domain-containing protein 3
Organism
onl
Oreochromis niloticus (Nile tilapia)
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
onl04054
]
102082314
Pattern recognition receptors [BR:
onl04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
102082314
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
NLRC4_HD2
NACHT
FISNA
NOD2_WH
PRY
SPRY
LRR_6
Motif
Other DBs
NCBI-GeneID:
102082314
NCBI-ProteinID:
XP_025761638
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All DBs
Position
LG3:complement(85830808..86272754)
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AA seq
985 aa
AA seq
DB search
MMMEEEEDRAESAGSSCPSVRSDRSKDRPPHFSGEPGPTRQCICSYWDQSASSGDSSCPH
CGERSRTRAGLQTASQSSCVQTDVGLQEVLDEHKISLRRRCERVTEGSDETGSRTLLNTI
YTELYITEGQSEEVRTQHEVRQLETASKMDALHGAPIRCQDIFKALPDQQRPIRVVLTNG
VAGVGKTFSVQKFTLDWAEGLENQHVSVVVLLSFRELNLIRDEQYSLLELIHVFHPTLQK
VTAEKLAVSQLLFIFDGLDESRLSLDFTNRKLLSDVTQKSSVSQLLTNLIQGNLLPSTLV
WITSRPAAANQIPPTCVDRLTEVRGFTDAQKEEYFRRRFSDEELSSRIISHMKTSRSLHI
MCSIPVFCWITATVLEHMLTTEQRGELPKTLTDMYSHFLLVQTKRKKNKYHEGHETSPQE
LTEADREVLLKLGRLAFEHLEKGNIMFYQEDLEQCGLDVTEASVYSGVCTEIFKRECVIF
QKPVYCFVHLSIQEFLAAVYMFHCYTNRNTEVLEDFSSVDEFLKRATEKSLQSKNGHLDL
FVRFLYGLCLESNQRLLGGLLGQTEISTETIQRIINNLKKINNDEISPDRSINIFHCLME
MNDLSVHQEIQEFLKSENRSKLLYMIHCSALAFMLQMSEEVLDELDLQKYNTSERGRQRL
IPAVRNCRKARMSICNLSERSCEALSSVLGSQSSYLRELDLSNSDLQDSGVKLLSAGLES
PHCTLETLSLSGCLITEKGCISLASALSSNPSHLRELDLSYNYPRGSGLKLLLAGLKDPS
WRLDTLRVEPSGVQWLRPGLRKYSCQLTIDTNTVHTKLKLSDNNRTVARVIEVQSYPYHP
DRFDYEPQLLCRNGLTGRCYWEVEWRGEVQISVSYRRIRRKGNSDDCVFGYNEKSWSLYC
TDDGPRSVWHNNKNTPISSISSSSSSSSSSVSNRVAVYVDHPAGTLSFYRVSSDTLIHLH
TFNTTFTLKLHPGFFIWSRSSVYLC
NT seq
2958 nt
NT seq
+upstream
nt +downstream
nt
atgatgatggaggaagaggaggacagagcagagtctgcagggtccagctgtccgtctgtg
aggagtgaccggtccaaagatcgacctccacacttcagtggtgaacctggaccaacgaga
cagtgcatctgctcatactgggaccagtctgcttcatcaggagactcctcctgtccccat
tgtggagaaagatccagaaccagagctggactgcagacggccagtcagagcagctgtgta
caaacagatgttggtctgcaggaggttttagatgaacataagatcagtctgaggaggaga
tgtgaacgtgtgactgaaggaagtgatgaaacaggaagtagaaccctcctcaacaccatc
tacactgagctctacatcacagagggacagagtgaagaggttcgtacccaacatgaggtg
aggcagctggagacagcttccaagatggacgccctccatggcgctccaatcaggtgccag
gacatctttaaagccttacctgaccaacagagacccatcagagtggttctgaccaacggc
gtggctggtgttggaaaaaccttctcagtgcagaagttcactctggactgggcagagggc
ttggagaaccaacatgtcagtgtggtggttctgctttcattcagggagctgaacctgatc
agagatgagcagtacagtcttctggagctgatccatgttttccatccaacattacagaag
gtcacagcagagaagctggctgtctctcagcttttgttcatctttgacggcctggatgaa
agcagactttcattggatttcaccaacaggaagctgctgtctgatgtcacacagaagtca
tcagtcagccagctgctgacaaacctcatccaggggaatctgcttccctcgactctcgtc
tggataacttcccgacctgcagcagccaatcagatccctcctacatgtgttgacaggcta
acagaagtacgaggcttcactgacgcccagaaggaggagtacttcaggaggagattcagt
gatgaagagctgtccagcagaatcatctcccacatgaagacatccaggagcctccacatc
atgtgtagtatcccagtcttctgctggatcactgctacagttctggagcacatgttgact
acagagcagagaggagagctgcccaagaccctgactgacatgtactcacacttcctgctg
gttcagacaaagaggaagaagaacaagtaccatgagggacatgagacgagtccacaggag
ctgacggaggctgacagggaagttcttctgaagctggggaggctggcgtttgaacatctg
gagaaaggcaacatcatgttctaccaagaagacctggagcagtgtggtctggatgtgaca
gaggcctcggtgtactcaggagtttgtacagagatcttcaaaagagagtgtgtgatcttc
cagaaaccagtctactgctttgttcatctgagcattcaggagtttctggctgctgtctac
atgttccactgttataccaacaggaacacagaggtgctggaagacttctcctctgtggat
gagtttctaaagagagccacggagaaatccctccagagtaaaaatggtcacctggacctg
tttgttcgcttcctttatggcctctgtctggagtccaaccagagactcttaggaggtctg
ctgggtcagacagagatcagtacagaaaccatccagagaatcatcaacaacctgaagaag
atcaacaatgatgaaatctctcctgacagaagcatcaacattttccactgtctgatggag
atgaacgacctctcagtacatcaggagatccaagagttcctgaagtcagagaacagatca
aagttactctatatgatccactgctctgctctggccttcatgctgcagatgtcagaggag
gttctggatgagttggacctgcagaagtacaacacatcagagcggggacgacagagactg
attccagctgtgaggaactgcagaaaggctcgaatgagtatctgcaacctttcagagaga
agctgtgaagctctgtcctcagttctaggctcccagtcttcttatctgagagagctggac
ctaagtaacagtgatctccaggattcaggagtgaagcttctatctgctggactggaaagt
ccacactgtacactggaaactctcagtctgtcaggctgtctgatcacagagaaaggctgt
atttctctggcctcagcactgagctccaacccctcccatctgagagagctggacctgagc
tacaattatccacgaggctcaggattgaagctgctgttggctggactgaaggatccaagt
tggagactggacactctcagggtggagccttctggagtccaatggttgagaccaggcctg
aggaagtattcctgtcaactcacaatcgacacaaacacagttcacacaaagctcaaactg
tctgacaacaacaggacggtggcacgtgtgatcgaggttcagtcatatccttatcatcca
gacagatttgattatgaacctcaactgctgtgcagaaatggtctgactggtcgctgttac
tgggaggtcgagtggagaggagaggtccaaatatcagtgagttacagaagaatcagaagg
aaaggaaacagtgatgactgtgtgtttggatacaacgagaagtcctggagtctgtactgc
actgatgatggtcctcgttctgtgtggcacaataacaaaaacacgcctatttcctccatc
tcctcctcctcctcttcctcctcctcatctgtctctaacagagtagcagtgtatgtggat
catcctgctggcactctgtccttctacagagtctcctctgacactctgatccacctccac
accttcaacaccacattcactctaaaacttcatcctgggttttttatctggtctcgttca
tcagtgtatctgtgctga
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